Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05510 and BL02447

See Amino acid alignment / Visit BSNT_05510 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:39
# Commandline: needle
#    -asequence dna-align/BSNT_05510___ywrA.1.5803.seq
#    -bsequence dna-align/BL02447___ywrA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05510___ywrA-BL02447___ywrA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05510___ywrA-BL02447___ywrA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05510___ywrA
# 2: BL02447___ywrA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 548
# Identity:     387/548 (70.6%)
# Similarity:   387/548 (70.6%)
# Gaps:          22/548 ( 4.0%)
# Score: 1254.0
# 
#
#=======================================

BSNT_05510___      1 ATGAT-ATCGATCTATTTATTTATGGCGTTTTTTATCGCAAACCTACTGG     49
                     ||||| ||| .|.|||.|.|||..|||.||.|||||.||||||.||.|||
BL02447___ywr      1 ATGATCATC-TTTTATCTGTTTTGGGCCTTCTTTATTGCAAACTTATTGG     49

BSNT_05510___     50 GATATGGCGGCGGACCTGCGTCTATCCCGC-TAATGTTTGAAGAAGTCG-     97
                     |.||.||.|||||.||.||.||.||.|||| |||| |||||||||||.| 
BL02447___ywr     50 GCTACGGAGGCGGGCCAGCTTCAATTCCGCTTAAT-TTTGAAGAAGTTGT     98

BSNT_05510___     98 TAAACAGATACAGCTGGCTCTCAAACGATCAATTCTCAAATATGCTCGCA    147
                     |.|.||..|.|| ||||||.|||||.||..||||.|||||.|||||.||.
BL02447___ywr     99 TCAGCATTTTCA-CTGGCTGTCAAAAGAGGAATTTTCAAACATGCTTGCG    147

BSNT_05510___    148 CTTGCGAACGCATTGCCGGGCCCGATCGCCACGAAAATCGCTGCGTATGT    197
                     |||||.||.||..||||.||||||||||||||.|||||.||.||.|||||
BL02447___ywr    148 CTTGCAAATGCGCTGCCAGGCCCGATCGCCACAAAAATTGCAGCTTATGT    197

BSNT_05510___    198 CGGCTACAGCGCAGGCGGGTGGCCCGGCTTCCTAATTGCCCTGATCGCAA    247
                     |||||||||||....|||.||||||||..|..|.|||||.||...|||||
BL02447___ywr    198 CGGCTACAGCGTGCTCGGATGGCCCGGTGTTTTCATTGCTCTTGCCGCAA    247

BSNT_05510___    248 CCGTCGTACCGTCGGCGCTCGCATTGATCGTCCTGCTGCGCA---TCATC    294
                     |.||..|.||.|||||..||||   |.||||..||||||.||   |.|||
BL02447___ywr    248 CTGTGCTTCCCTCGGCCATCGC---GCTCGTTTTGCTGCTCAAGCTGATC    294

BSNT_05510___    295 CAGCGCTTCCGCCAATCACCTGTCATCAAAGGCATGACGCTGTCCGTCCA    344
                     ...||||.||||||.||.|..|||.|||||||.|||||..||||.||.||
BL02447___ywr    295 GGCCGCTACCGCCAGTCGCAGGTCGTCAAAGGAATGACCTTGTCGGTTCA    344

BSNT_05510___    345 GCCTGTCATCGCGGTCATGATGCTCATTCTTACCTGGCAAATCAGCGCAG    394
                     |||.||.||.||.||.||||||||..||.|.||.|||.|||||||||..|
BL02447___ywr    345 GCCGGTTATAGCCGTGATGATGCTTCTTTTAACATGGGAAATCAGCGGCG    394

BSNT_05510___    395 ACGGCATCAAAGCGATCGGC-TGGATCCAATCGATCGTGATTGCGGGAAT    443
                     |||..|||.|..|||||||| ||| |.|||||..|.||.||.|||...||
BL02447___ywr    395 ACGCGATCCATTCGATCGGCATGG-TTCAATCACTTGTCATCGCGCTGAT    443

BSNT_05510___    444 TTCGCTCCTT----GCCATGACAAAATTCAAAATGCATCCGGCATTTTTG    489
                         |||.||    |||.||||.||.|||....|.||||||||.||..||
BL02447___ywr    444 ----CTCTTTAGTCGCCTTGACGAAGTTCCGCGTCCATCCGGCTTTCCTG    489

BSNT_05510___    490 ATTATCGCGGCGTTTTTATATGGGGGCCTTGTGATCCCTCATTTTTAG    537
                     ||..|.|||||.||....||.||.||.|||||.||.||.|...|.|||
BL02447___ywr    490 ATCGTGGCGGCCTTCGCTTACGGCGGGCTTGTCATTCCGCTGCTGTAG    537


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