Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05562 and BL02451
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:41
# Commandline: needle
# -asequence dna-align/BSNT_05562___ywoH.1.5803.seq
# -bsequence dna-align/BL02451___ywoH.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05562___ywoH-BL02451___ywoH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05562___ywoH-BL02451___ywoH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05562___ywoH
# 2: BL02451___ywoH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 457
# Identity: 287/457 (62.8%)
# Similarity: 287/457 (62.8%)
# Gaps: 71/457 (15.5%)
# Score: 872.0
#
#
#=======================================
BSNT_05562___ 1 ATG--TCCTACGTCAACAGACACCTCATTCATCAAATCAACCAAAGCGCC 48
||| .|.|| ||||..||.|..|.|||||.||..||||.||||||.|.
BL02451___ywo 1 ATGGAACATA--TCAATCGAAAGATTATTCACCAGCTCAATCAAAGCACT 48
BSNT_05562___ 49 CGCCTGATTGCCAAGAAAGCCAATGAACAGCTAGAGCCATTCGGCCTTTA 98
||..||.||||.||.|||.|.|||||||||||.||..|.|.|||||||||
BL02451___ywo 49 CGGATGGTTGCTAAAAAAACGAATGAACAGCTCGAAGCGTACGGCCTTTA 98
BSNT_05562___ 99 ---TTCATCCCAATGGTCAGTTTTATATTGTTTGCGTACGATCGGACCAA 145
|||| ||.|||||..|..||||||||.|.|..||...||||||.|
BL02451___ywo 99 CGGTTCA---CAGTGGTCGATCCTATATTGTCTTCACACCTACGGACCGA 145
BSNT_05562___ 146 TGACTCAAAAAGAGATTTGGTCCTATTTAAATGTGGAAGCGCCGACTGTG 195
||||.||.|||||.||.|||.|.|||||..|.||.|||||||||||||||
BL02451___ywo 146 TGACGCAGAAAGACATATGGACTTATTTGCACGTCGAAGCGCCGACTGTG 195
BSNT_05562___ 196 ACTCGGACGATCAAACGCCTGGAGGAGAACGGCTGGGTTCAGAGACGG-- 243
||..|.||..|||..|||||.||..|.|||||||||||..| ||||
BL02451___ywo 196 ACAAGAACCGTCAGCCGCCTCGAAAAAAACGGCTGGGTCGA---ACGGAT 242
BSNT_05562___ 244 -CAAGGTGAAGACAAACGGGAAAAACTTGTTGTC---CTCACAAAAGAAG 289
||.||.||.||||||||||||||| ||.||| .|.|||.||||||
BL02451___ywo 243 ACAGGGCGATGACAAACGGGAAAAA---GTCGTCAAGATGACAGAAGAAG 289
BSNT_05562___ 290 CCGAGAAAAAATACGAAGA-AATCAATGTGAAAATGCTGAAATTCGAGGA 338
||.|.|..|||||.||.|| |.||||| |.||||||....||||.||.||
BL02451___ywo 290 CCAAAATTAAATATGATGACATTCAAT-TAAAAATGAAAGAATTTGAAGA 338
BSNT_05562___ 339 AGAGCTGCTTGCTG-ATTTCCGGGATGAA---GATAAAGAAGCTTTTTCT 384
.||..|||||.|.| |||| ||.||| ||||||.||
BL02451___ywo 339 GGAAATGCTTTCCGTATTT----GAAGAACGGGATAAAAAA--------- 375
BSNT_05562___ 385 CATTTATTCCGCATGTTTTTACAACAAT-----GA--------------- 414
.||||||..|.|.|.|||...|||| ||
BL02451___ywo 376 ---ATATTCCAAAGGCTGTTAAGTCAATTGTTAGAAGGACACCAGGAGGA 422
BSNT_05562___ 414 ------- 414
BL02451___ywo 423 GTTGTAG 429
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