Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05564 and BL02452
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:41
# Commandline: needle
# -asequence dna-align/BSNT_05564___ywoG.1.5803.seq
# -bsequence dna-align/BL02452___ywoG.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05564___ywoG-BL02452___ywoG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05564___ywoG-BL02452___ywoG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05564___ywoG
# 2: BL02452___ywoG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1284
# Identity: 831/1284 (64.7%)
# Similarity: 831/1284 (64.7%)
# Gaps: 183/1284 (14.3%)
# Score: 2546.5
#
#
#=======================================
BSNT_05564___ 1 TTGAAAAAAGCGGATGCGATATGGACCAAGGATTTTATTATGGTCCTGCT 50
.||||..||||.||..|.||.|||||||.|||||||||.||||||.| .|
BL02452___ywo 1 ATGAAGCAAGCTGAACCCATTTGGACCAGGGATTTTATCATGGTCGT-TT 49
BSNT_05564___ 51 TG-TCAATTTATTTGTGTTTGTGTTCTTTTATACATTTTTAACTGTATTG 99
|| |.|||||.|||.|.||.||.|..|||||..||.|.||.||.||..|.
BL02452___ywo 50 TGATTAATTTGTTTATATTCGTCTATTTTTACGCACTATTGACCGTGCTT 99
BSNT_05564___ 100 CCGATCTACACGCTGCAAGAGCTTGGCGGTACAGAATCACAAGGCGGGCT 149
|||.||||..||.||||.|||||.|||||..|.||.|||.|.|||||.||
BL02452___ywo 100 CCGGTCTATGCGATGCAGGAGCTCGGCGGCTCCGAGTCAGAGGGCGGCCT 149
BSNT_05564___ 150 TTTAATCAGCCTGTTCCTTCTGTCTGCGATCATTACACGGCCTTTCTCCG 199
|||.||||||...|||.|.|||||.|||||..||.||.||||.||.||.|
BL02452___ywo 150 TTTGATCAGCGGCTTCATGCTGTCCGCGATTTTTGCAAGGCCGTTTTCGG 199
BSNT_05564___ 200 GAGCCATCGTTGAGCGTTTCGGGAAGAAAAGAATGGCGATTGTATCAATG 249
||||..|..||||||||||.||.||.||.||||||||..| .||||
BL02452___ywo 200 GAGCTGTTATTGAGCGTTTTGGCAAAAAGAGAATGGCACT--CATCA--- 244
BSNT_05564___ 250 GCGCTCTTCGCCCTAT---------CATCTTTTCTGTATATGCCGATTCA 290
||| |||..||.| ||||.|||||.|||||....|||||
BL02452___ywo 245 GCG----TCGTGCTGTTTACTTTGGCATCATTTCTTTATATCTTCATTCA 290
BSNT_05564___ 291 TAACTTTTCCCTGCTGCTCGG-ATTGCGGTTCTTCCAAGGGATTTGGTTC 339
..|..|.|.|||||||||.|| ||| ||.||.||||||||.|||||||||
BL02452___ywo 291 CGATATCTACCTGCTGCTTGGCATT-CGCTTTTTCCAAGGCATTTGGTTC 339
BSNT_05564___ 340 AGCATTTTAACGACTGTTACAGGTGCAATTGCCGCTGATATTATT---CC 386
|||||..|.||.||.||.||..||||||||||.||.|||.|.||| ||
BL02452___ywo 340 AGCATCATCACCACGGTGACGAGTGCAATTGCAGCCGATTTAATTCCGCC 389
BSNT_05564___ 387 AGCCAAACGGCGCGGTGAAGGGCTTGGATACTTTGCCATGTCTATGAACC 436
.||| ||.|||||.||||||||.||.||.|||||.|||||.|||||
BL02452___ywo 390 GGCC---CGCCGCGGGGAAGGGCTGGGCTATTTTGCTATGTCGATGAA-- 434
BSNT_05564___ 437 TCGCTATGGCGATTG-----GGCC--TTT----CCTTG-GCCTGAATTTG 474
|.|||||.||| |||| ||| ||||| .|||| .|.|
BL02452___ywo 435 ----TTTGGCGGTTGTCATCGGCCCGTTTATCGCCTTGAACCTG--CTGG 478
BSNT_05564___ 475 ATGA---GAGTGGTAAGCTTTC----CTGTATTCTTTA------------ 505
||.| |||| .|||| ||||.|..||||
BL02452___ywo 479 ATAAAATGAGT------TTTTCCGATCTGTTTATTTTATTTTCAGGAATC 522
BSNT_05564___ 506 -----------CAGCCTTTGCGCTGTTTA------TGGTTGCGGGCTTAC 538
||.|||.|| || ||| |||||
BL02452___ywo 523 GTCACTGTAGCCATCCTCTG-------TACGGCACTGG-TGCGG------ 558
BSNT_05564___ 539 TTGTTTCGTTCTTGATAAAAGTGCCGCAAAGTAAGGACAGCGGCACGACT 588
.|||.| |||| |.||.||||.|.|..|..||
BL02452___ywo 559 -------ATTCCT----AAAG---------GAAACGACATCCGTTCAGCT 588
BSNT_05564___ 589 GTATTCCGTTTTGCGTTCTCGGATATGTTTGAAAAGGGCGC-ACTCAAAA 637
||.|||.|..|..|.||.||..|.||||||||||||||||| |.|| ..|
BL02452___ywo 589 GTGTTCAGGCTGTCATTTTCCAACATGTTTGAAAAGGGCGCGATTC-GGA 637
BSNT_05564___ 638 TTGCGACGGTCGGTTTGTTTATTTCTTTCTGTTATTCAACAGTCA----C 683
||||.||||||||.|||||..|.||.||.||||||||||..||.| |
BL02452___ywo 638 TTGCAACGGTCGGCTTGTTCGTGTCGTTTTGTTATTCAAGCGTGATTTCC 687
BSNT_05564___ 684 ATCATATCTGTCTGTATTCGCCAAATCAGTTGACCTTTCGGATATC-AGC 732
.||||.|||||.|.| ||||||||..|.|.||||...|| |.| |||
BL02452___ywo 688 TTCATCTCTGTTTAT----GCCAAATCCCTCGGCCTTATTGA-AGCAAGC 732
BSNT_05564___ 733 GGATATTTCTTTGTTTGT-TTTGCGGTGACAATGATGATTGCACGC--CC 779
.|.||||||||| .|.|| ||.||||||||||||||||| ||||| ||
BL02452___ywo 733 AGCTATTTCTTT-ATGGTGTTCGCGGTGACAATGATGAT--CACGCGGCC 779
BSNT_05564___ 780 GTTCACAGGGAAATTGTTCGACAAAGTCGGACCGGGCATTGTCATTTATC 829
|||.||.||.|||.|||..||.||||||||.|||||..|.||||||||||
BL02452___ywo 780 GTTTACGGGAAAACTGTATGATAAAGTCGGCCCGGGAGTCGTCATTTATC 829
BSNT_05564___ 830 CATCAATCCTGATTTTCTCTGTCGGACT----CTGCATGCTGTCCTTCAC 875
|.||.||..|.|||||.|..|.|||.|| ||||.|||| ||.||
BL02452___ywo 830 CGTCCATTATCATTTTTTGCGCCGGGCTTTTCCTGCTTGCT----TTTAC 875
BSNT_05564___ 876 ACATAGCGGCTTAATGCTTCTGCTTTCAGGGGCGGTTATCGGTCTTGGCT 925
|.|.|||.|....||||||.||||.||.||.||.||.|||||..|.||||
BL02452___ywo 876 AAACAGCAGTGCGATGCTTTTGCTATCCGGAGCTGTCATCGGCATCGGCT 925
BSNT_05564___ 926 ACGGATCAATCGTTCCTTGCATGCAAACATTGGCGATTCAGAAATCTCCG 975
|||||||.|||...||.|||.|.||.||.||||||||.|||...||.|||
BL02452___ywo 926 ACGGATCTATCACACCGTGCCTTCAGACCTTGGCGATCCAGTCTTCGCCG 975
BSNT_05564___ 976 GCTCACCGCTCCGGTTTTGCAACGGCAACGTTCTTTACCTTCTTTGACAG 1025
.|||||||...|||.|.||||||.||.||.|..|||||..|.|||||.|.
BL02452___ywo 976 CCTCACCGGAGCGGCTATGCAACAGCGACTTATTTTACGCTGTTTGATAC 1025
BSNT_05564___ 1026 CGGAATTGCTGTAGGATCGTATGTATTCGGATTGTTTGTAGCATCTGCCG 1075
|||.||.||.||.|||||.|||||.|||||.|||.||||.|||...||||
BL02452___ywo 1026 CGGCATCGCAGTCGGATCCTATGTTTTCGGGTTGGTTGTGGCACAAGCCG 1075
BSNT_05564___ 1076 GCTTCTCTGCCATTTATTTA---ACAGCGGGGC-TGTTCGTTTTAATTGC 1121
|.||.||...|||||||||| .|| ||| |.|||| |||
BL02452___ywo 1076 GTTTTTCAAACATTTATTTATTCTCA----GGCGTTTTCG-------TGC 1114
BSNT_05564___ 1122 T-------CTGCTTCTCTATACGTGGAGCCAGAAAAAAACTGCAGAGGCT 1164
| |||.||||.|||||.||||||| |||||.|||||...||
BL02452___ywo 1115 TCATCAACCTGTTTCTGTATACATGGAGCC---AAAAACCTGCATCCGC- 1160
BSNT_05564___ 1165 GAAGGAAAAG-------TGTCTATTGCAGAATAA 1191
.|||||.||| |.||.||.||.||||||
BL02452___ywo 1161 AAAGGAGAAGCGGGATATATCAATGGCTGAATAA 1194
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