Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05449 and BL02461
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:34
# Commandline: needle
# -asequence dna-align/BSNT_05449___tagG.1.5803.seq
# -bsequence dna-align/BL02461___tagG.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05449___tagG-BL02461___tagG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05449___tagG-BL02461___tagG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05449___tagG
# 2: BL02461___tagG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 838
# Identity: 717/838 (85.6%)
# Similarity: 717/838 (85.6%)
# Gaps: 20/838 ( 2.4%)
# Score: 3114.0
#
#
#=======================================
BSNT_05449___ 1 ATGAATGCATTAGTGAGAATACTGAAAGAGCAAGCAACGTCATTTTCTTT 50
||||||||||||||||.||||||||||||.||||.|||.||.|||.||||
BL02461___tag 1 ATGAATGCATTAGTGAAAATACTGAAAGAACAAGTAACATCGTTTCCTTT 50
BSNT_05449___ 51 AATATTACGCTTGGCAGCTTACGAAACAAAATCAAAATACCAAATGAACT 100
|||.||.||.|||||||||||||||||||||||||||||.||||||||.|
BL02461___tag 51 AATCTTGCGTTTGGCAGCTTACGAAACAAAATCAAAATATCAAATGAATT 100
BSNT_05449___ 101 ATTTGGGTGTGCTGTGGCAGTTGTTAAATCCACTCATTCAAATGTTGGCC 150
|||||||.|||.|.||||||||.||.|||||.||||||||.|||.||||.
BL02461___tag 101 ATTTGGGCGTGTTATGGCAGTTTTTGAATCCGCTCATTCAGATGCTGGCT 150
BSNT_05449___ 151 TACTGGTTTGTTTTTGGGATCGGGATTAGAAAAAGCACTGATGTGGTTAC 200
||.||||||||.|||||||||||.||.|||||.||||.|||..||.||||
BL02461___tag 151 TATTGGTTTGTATTTGGGATCGGAATCAGAAAGAGCAGTGAGATGATTAC 200
BSNT_05449___ 201 GGGTATTGGTGAAGTGTCTTTTATCATTTGGATGCTAGCCGGTTTGATTC 250
|||..|.||.||||||.||||.|||||.||||||||.|||||||||||||
BL02461___tag 201 GGGGGTCGGCGAAGTGCCTTTCATCATATGGATGCTTGCCGGTTTGATTC 250
BSNT_05449___ 251 CGTGGTTTTTTATCAGCCCGACGATTCTAGATGGTTCAAACAGTGTATAT 300
|.||||||||||||||||||||||||||.|||||||||||||||||||||
BL02461___tag 251 CCTGGTTTTTTATCAGCCCGACGATTCTTGATGGTTCAAACAGTGTATAT 300
BSNT_05449___ 301 AAGCGAATCAACATGGTGGCCAAAATGAATTTTCCAATTAGCTCGCTTCC 350
||||||||||||||||||||||||||||||||||||||.|||||.|||||
BL02461___tag 301 AAGCGAATCAACATGGTGGCCAAAATGAATTTTCCAATCAGCTCTCTTCC 350
BSNT_05449___ 351 TTCAGTAGCGATTGTGGCAAACCTGTTCAGCTATTTTGTGATGATGGTGA 400
||||||.|||||||.|||.||||||||||||||||||||||||||||.||
BL02461___tag 351 TTCAGTGGCGATTGCGGCTAACCTGTTCAGCTATTTTGTGATGATGGCGA 400
BSNT_05449___ 401 TTTATATC-----GTTGCATTAACAGCGTCTGGTATTTATCCAAGTCTTC 445
|||||.|| |.|||.| ||||.|||.||||||||||.|||||
BL02461___tag 401 TTTATGTCATTGTGCTGCTT-----GCGTTTGGCATTTATCCAAATCTTC 445
BSNT_05449___ 446 ATTGGATTGAATACATTTACTATTTTATCTGTATGGTTATATTTATGTTT 495
|.|||.|||||||.|||||||||||..|.||.|||.||.|.||||||||.
BL02461___tag 446 AATGGCTTGAATATATTTACTATTTGTTTTGCATGATTGTTTTTATGTTC 495
BSNT_05449___ 496 GCCTTTAGTTTGTTTAATTCAACCATTAGTGTGCTTGTTAGGGACTATCA 545
||.||.|||||||||||||||||.||.|||||.||.||.|||||.|||||
BL02461___tag 496 GCATTCAGTTTGTTTAATTCAACGATCAGTGTACTGGTCAGGGATTATCA 545
BSNT_05449___ 546 GTTTTTGCTCCAATCTGTGACAAGGCTGCTGTTTTTTTTGTTGCCTATCT 595
||||.||||.|||||.||||||||||||.|||||||..||.||||.||.|
BL02461___tag 546 GTTTCTGCTGCAATCGGTGACAAGGCTGTTGTTTTTCCTGCTGCCGATTT 595
BSNT_05449___ 596 TTTGGGATA----TAGGACATCAGTTAGGGAAAGAGCATCCCGTTTTACT 641
||||||||| ||.| |||.|.|||.|..||||.||.|..||..|
BL02461___tag 596 TTTGGGATATCTCTACG----CAGCTGGGGGACAAGCACCCGGCATTGTT 641
BSNT_05449___ 642 -AACAGCTATTAAACTGAATCCACTTTTTTATATTTTAGATGGATTTAGA 690
||| |..|||||.||||||||.||||||||||||.|.||.|||||||||
BL02461___tag 642 GAAC-GTGATTAAGCTGAATCCGCTTTTTTATATTATCGACGGATTTAGA 690
BSNT_05449___ 691 AGCAGCTTTTTCGACGGAAGCTGGTTCTTCGAAGATATAACATACACGTT 740
|.||||||||||||||||||||||||||||||||||||||||||.|||||
BL02461___tag 691 AACAGCTTTTTCGACGGAAGCTGGTTCTTCGAAGATATAACATATACGTT 740
BSNT_05449___ 741 GTATTTCTGGGCTTTCACATTATTGCTCTTGACTGTAGGATCTGTCCTGC 790
||||||||||||||||||||||||||||||||||||||||||||||||||
BL02461___tag 741 GTATTTCTGGGCTTTCACATTATTGCTCTTGACTGTAGGATCTGTCCTGC 790
BSNT_05449___ 791 ATATGAAATTCAGGGATAGGTTTGTTGACTTTCTTTAA 828
||||||||||||||||.|||||||||||||||||||||
BL02461___tag 791 ATATGAAATTCAGGGACAGGTTTGTTGACTTTCTTTAA 828
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