Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05464 and BL02474
See
Amino acid alignment /
Visit
BSNT_05464 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:36
# Commandline: needle
# -asequence dna-align/BSNT_05464.1.5803.seq
# -bsequence dna-align/BL02474___ywtG.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05464-BL02474___ywtG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05464-BL02474___ywtG.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05464
# 2: BL02474___ywtG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1461
# Identity: 897/1461 (61.4%)
# Similarity: 897/1461 (61.4%)
# Gaps: 273/1461 (18.7%)
# Score: 3049.0
#
#
#=======================================
BSNT_05464 1 ---AT-----GAAAAAGCAGTCAAATATATGGCTTTATTTTTTCGGAGCT 42
|| ||||||| .||.|||...||||||||||||||.|||||
BL02474___ywt 1 GTGATGAAGGGAAAAAG--ATCGAATGCCTGGCTTTATTTTTTTGGAGC- 47
BSNT_05464 43 CTT-GGAGGCGCGTTATATGGCTATGATACCGGAGTGATTTCCGGAGCTA 91
||| ||.||.|.|.|.||.||.||||||||.||.||.||||||||.||.|
BL02474___ywt 48 CTTGGGCGGTGTGCTCTACGGTTATGATACAGGCGTCATTTCCGGGGCGA 97
BSNT_05464 92 TTTTATTTATGAAAAAGGAGTTAGGATTGAATGCGTTTACAGAAGGTCTT 141
||||.|||||||||.|.||..|.||..|.|||||.|||||||||||.||.
BL02474___ywt 98 TTTTGTTTATGAAAGATGAACTTGGGCTCAATGCCTTTACAGAAGGGCTG 147
BSNT_05464 142 GTTGTCAGCTCCTTACTGGTTGGGGCGATACTAGGCTCGGGAGCGGCCGG 191
|||||||||.|..||.|..|.||||||||..|.||.|||||...|.|.||
BL02474___ywt 148 GTTGTCAGCGCAATATTAATCGGGGCGATTTTCGGATCGGGTTTGTCAGG 197
BSNT_05464 192 CAAGCTGACTGACCGTTTCGGAAGAAAAAAAGCAATTATGACGGCCGCGC 241
||.||||||.|||||.|||||..|||.||..||.||||||.|.||.||..
BL02474___ywt 198 CAGGCTGACAGACCGCTTCGGCCGAAGAAGGGCGATTATGTCAGCGGCTG 247
BSNT_05464 242 TGTTGTTTTGTATAGGCGGTCTTGGTGTGGCACTGGCCCCAAATACGGGA 291
||.|||.|||.||.||.||.||.||...|||.|||||.||||..||||.|
BL02474___ywt 248 TGCTGTATTGCATCGGGGGGCTCGGAACGGCCCTGGCGCCAAGCACGGAA 297
BSNT_05464 292 GTCATGGTGCTG-TTTC-GCATCATTTTGGGACTTGCAGTCGGAACATCG 339
...|||||| | |||| |.|||.|..|.||.|||||||||||....||.
BL02474___ywt 298 TATATGGTG--GCTTTCAGGATCGTGCTCGGCCTTGCAGTCGGCTGTTCA 345
BSNT_05464 340 ACGACGATCGTGCCGCTTTATTTATCTGAACTGGCGCCAAAGCATAAGCG 389
|||||.|||||.||..|.||..|.||.||.||.||.||.||| .||.|.
BL02474___ywt 346 ACGACCATCGTTCCTTTGTACCTTTCAGAGCTTGCTCCGAAG--GAATCC 393
BSNT_05464 390 CGGG--GCGCTGTCATCACTGAATCAGCTGATGATCACGGTCGGCATCCT 437
|||| |||||.||.|||.|.||||||||||||||.|||.||||.||.||
BL02474___ywt 394 CGGGGCGCGCTTTCTTCATTAAATCAGCTGATGATTACGATCGGGATTCT 443
BSNT_05464 438 TCTTTCTTACATTG-TCAATTACATATTTGCCGATGCCGAAGCGTGGCGC 486
.||.||||| .||| ||||.||...||||...|||||.|..||.||||||
BL02474___ywt 444 GCTCTCTTA-TTTGATCAACTATGCATTTAGTGATGCAGGCGCATGGCGC 492
BSNT_05464 487 TGGATGCTTGGATTGGCTGCTGTGCCGTCATT--GCTCTTGCTCATTGGC 534
||||||||.||||||||...|.|.||||||.| ||..|| |.||.||.
BL02474___ywt 493 TGGATGCTGGGATTGGCCCTTATTCCGTCAATCGGCCTTT--TAATCGGT 540
BSNT_05464 535 ATTTTGTTTATGCCGGAGAGCCCGCGCTGGCTGTTCACGAATGGCGA--- 581
||.||.||.||||||||.||||||||||||||.||.||.||.||..|
BL02474___ywt 541 ATCTTTTTCATGCCGGAAAGCCCGCGCTGGCTCTTAACAAAAGGAAAAGA 590
BSNT_05464 582 --AGAAAGCAAAGCGAAGAACATTCTTG-AAAAGTTGCGTGGCACAACAG 628
|||||||||.||| ..|.||| .||||.||.|.|| |..||
BL02474___ywt 591 AGAGAAAGCAAGGCG------GGTTTTGTCAAAGATGAGAGG---AGGAG 631
BSNT_05464 629 A---TATTGATCAGGAAATACATGATATAAAAGAAGCGGAAAAGCAGGAT 675
| ..|.|||||||||.|..|.||.||.||.|||||||||||||||||.
BL02474___ywt 632 AGCGGGTCGATCAGGAAGTCAAAGAAATTAAGGAAGCGGAAAAGCAGGAC 681
BSNT_05464 676 GAAGGCGGCCTGAAGGAGCTGTTCGATCCATGGGTGCGCCCAGCCCTGAT 725
.|.||.|||.||||.||||||.|.||.||.|||||||||||.||..|.||
BL02474___ywt 682 CAGGGGGGCTTGAAAGAGCTGCTGGAACCGTGGGTGCGCCCGGCGTTAAT 731
BSNT_05464 726 TGCCGGTTTGGGATTGGCATTTTTGCAGCAATTTATCGGAACGAATACGA 775
.||.||..|.|||.||||||||.|||||||||||||.|||||.||.||||
BL02474___ywt 732 CGCAGGGGTCGGACTGGCATTTCTGCAGCAATTTATTGGAACCAACACGA 781
BSNT_05464 776 TCATCTACTATGCGCCAAAAACCTTTACAAACGTCGGATTCGGAAACTCC 825
|.||.||||||||.||||||||.|||||.||.||||||||.|.|.|.||.
BL02474___ywt 782 TTATTTACTATGCCCCAAAAACGTTTACGAATGTCGGATTTGAAGATTCG 831
BSNT_05464 826 GCTTCAATTTTAGGAACGGTCGGAATCGGCACAGTCAATGTTGTCATGAC 875
||..|.||||||||.||.|||||.|||||.||.||||||||..|.|||||
BL02474___ywt 832 GCGGCCATTTTAGGGACAGTCGGCATCGGAACGGTCAATGTCCTGATGAC 881
BSNT_05464 876 ATTAGTAGCGAT----TAAAATCATCGACAAGATTGGAAGAAAGCCGTTA 921
..|.||.||||| | ||||.||||.||||||..|.||||||.|.
BL02474___ywt 882 GCTTGTGGCGATCCGCT----TCATTGACAGGATTGGCCGGAAGCCGCTT 927
BSNT_05464 922 CTGCTATTCGGGAATGCGGGAATGGTGATCAGCTTGATCGTTCTCGCTTT 971
.|..||||.||.|||||.||||||||.|||||.||||||||.||..||||
BL02474___ywt 928 TTATTATTTGGAAATGCCGGAATGGTCATCAGTTTGATCGTGCTTTCTTT 977
BSNT_05464 972 AGTAAATCTCTTTTTCGATAACA-CTCCGGCTGCCTCATGGACGACCGTC 1020
....|||||||||||||..||.| |||.|| |||..||||||||||.|||
BL02474___ywt 978 TTCTAATCTCTTTTTCGGCAATACCTCTGG-TGCGGCATGGACGACTGTC 1026
BSNT_05464 1021 ATTTGTTTAGGCGTGTTTATCGTTGTCTTTGCGGTCAGCTGGGGACCGGT 1070
||.||.|||||.|||||.|||||.||.|||||.|||||||||||.|||.|
BL02474___ywt 1027 ATCTGCTTAGGTGTGTTCATCGTCGTATTTGCCGTCAGCTGGGGGCCGAT 1076
BSNT_05464 1071 TGTGTGGGTGATGCTTCCTGAATTGTTCCTGCTTCATGTCAGAGGAATCG 1120
.||.|||||||||||.|||||..||||||..||||||||||||||.||.|
BL02474___ywt 1077 CGTCTGGGTGATGCTGCCTGAGCTGTTCCCCCTTCATGTCAGAGGGATAG 1126
BSNT_05464 1121 GGACCGGTGTTTCGAC---------------------------------- 1136
|.|||||.||.|||||
BL02474___ywt 1127 GAACCGGAGTATCGACTTTAATGCTCCATGCAGGGAACTTAATTGTGACT 1176
BSNT_05464 1137 ----------------------CAGCGATGGGAATCAGTTATTTATTCCT 1164
.|||||||||.||||||||..|.||.||
BL02474___ywt 1177 TTGAGTTTTCCGGTCCTCATGGAAGCGATGGGCATCAGTTACCTGTTTCT 1226
BSNT_05464 1165 GATTTATGCCGCGATCGGTATCATGGCGTTCTTATTTGTCCGATTTAA-- 1212
|...|||||.||.||.||.|||..|||.|||.|.||.|||...|||||
BL02474___ywt 1227 GTGCTATGCGGCCATTGGAATCGCGGCCTTCCTGTTCGTCTTCTTTAAAG 1276
BSNT_05464 1212 -------------------------------------------------- 1212
BL02474___ywt 1277 TAACAGAAACAAAAGGAAAAGTCTGGAAGAGATCGAGCAGGATTTGCGGG 1326
BSNT_05464 1212 -------------------------------------------------- 1212
BL02474___ywt 1327 ACAAGCACCGCGGAATCACGGCAACTGACACACAGCCGGTTGAACGATAG 1376
BSNT_05464 1212 -------------------------------------------------- 1212
BL02474___ywt 1377 GCAAAAGGATGGGCAAGGCCCCATCCTTTTTTGTGTGAAGAGGCCGGCCG 1426
BSNT_05464 1212 ----------- 1212
BL02474___ywt 1427 ATCATGGCTGA 1437
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.