Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05471 and BL02477

See Amino acid alignment / Visit BSNT_05471 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:37
# Commandline: needle
#    -asequence dna-align/BSNT_05471___ywtA.1.5803.seq
#    -bsequence dna-align/BL02477___pgsC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05471___ywtA-BL02477___pgsC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05471___ywtA-BL02477___pgsC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05471___ywtA
# 2: BL02477___pgsC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 450
# Identity:     351/450 (78.0%)
# Similarity:   351/450 (78.0%)
# Gaps:           0/450 ( 0.0%)
# Score: 1359.0
# 
#
#=======================================

BSNT_05471___      1 ATGTTCGGATCAGATTTATACATCGCACTAATTTTAGGTGTACTACTCAG     50
                     |||||.||||||||||||||.|||||.||.||||||||.||..|||||||
BL02477___pgs      1 ATGTTTGGATCAGATTTATATATCGCCCTCATTTTAGGAGTCTTACTCAG     50

BSNT_05471___     51 TTTAATTTTTGCGGAAAAAACAGGGATCGTGCCGGCAGGACTGGTTGTAC    100
                     |||.||||||||.||.|||||.||.||.||.||.||.||.||.||.||||
BL02477___pgs     51 TTTGATTTTTGCAGAGAAAACGGGAATTGTACCAGCCGGCCTCGTCGTAC    100

BSNT_05471___    101 CGGGATATTTAGGACTTGTGTTTAATCAGCCGGTCTTTATTTTACTTGTT    150
                     ||||.|||||.||||||||.||.|||||||||.|.||.||..|.||.|||
BL02477___pgs    101 CGGGTTATTTGGGACTTGTCTTCAATCAGCCGATTTTCATGCTGCTCGTT    150

BSNT_05471___    151 TTGCTAGTGAGCTTGCTCACTTATGTTATCGTGAAATACGGTTTATCCAA    200
                     .|..|.||.||.|||||.||.|||||.||||||||||.|||..|.|||||
BL02477___pgs    151 CTTTTTGTCAGTTTGCTGACGTATGTCATCGTGAAATTCGGACTTTCCAA    200

BSNT_05471___    201 ATTTATGATTTTGTACGGACGCAGAAAATTTGCTGCCATGCTGATAACAG    250
                     |.||||||||.|.|||||||||||||||||.||.||.||||||||.||.|
BL02477___pgs    201 AATTATGATTCTATACGGACGCAGAAAATTCGCAGCAATGCTGATTACGG    250

BSNT_05471___    251 GGATCGTCCTAAAAATCGCGTTTGATTTTCTATACCCGATTGTACCATTT    300
                     |.||..|..|.|||||||..|||||||||.||||.|||.|..|.||.|||
BL02477___pgs    251 GAATTCTTTTGAAAATCGGTTTTGATTTTATATATCCGGTGATGCCGTTT    300

BSNT_05471___    301 GAAATCGCAGAATTTCGAGGAATCGGCATCATCGTGCCAGGTTTAATTGC    350
                     ||.||.||.|||||..|.||||||||.|||||||||||.||..|.||.||
BL02477___pgs    301 GAGATTGCCGAATTCAGGGGAATCGGAATCATCGTGCCGGGGCTGATCGC    350

BSNT_05471___    351 CAATACCATTCAGAAACAAGGTTTAACCATTACGTTCGGAAGCACGCTGC    400
                     ||||||||||||.|.|||.||.|||||.||||||.|.|||||.|||||..
BL02477___pgs    351 CAATACCATTCAAAGACAGGGATTAACGATTACGCTTGGAAGTACGCTTT    400

BSNT_05471___    401 TATTGAGCGGAGCGACCTTTGCTATCATGTTTGTTTACTACTTAATTTAA    450
                     |||||||||||||.||.||.|..||.||||.||.||||||..||||.|||
BL02477___pgs    401 TATTGAGCGGAGCAACATTCGTCATTATGTATGCTTACTATCTAATCTAA    450


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