Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06232 and BL02502
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:12
# Commandline: needle
# -asequence dna-align/BSNT_06232___ppaC.1.5803.seq
# -bsequence dna-align/BL02502___ppaC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06232___ppaC-BL02502___ppaC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06232___ppaC-BL02502___ppaC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06232___ppaC
# 2: BL02502___ppaC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 976
# Identity: 683/976 (70.0%)
# Similarity: 683/976 (70.0%)
# Gaps: 92/976 ( 9.4%)
# Score: 2242.0
#
#
#=======================================
BSNT_06232___ 1 ATG-GAAAAGATACTTATTTTCGGACACCAAAACCCAGACACAGATACGA 49
||| |.|||| ||||||||||.||.|||.||||.||.||.||.|||||||
BL02502___ppa 1 ATGAGTAAAG-TACTTATTTTTGGCCACAAAAATCCGGATACGGATACGA 49
BSNT_06232___ 50 TTTGTTCTGCGATCGCTTATGCTGATTTGAAAAACAAACTCGGCTTCAAT 99
|||||||.|||||.||.|||||.||.||.|||||..|.||||||.|..|.
BL02502___ppa 50 TTTGTTCAGCGATTGCATATGCCGAATTAAAAAAGGAGCTCGGCATGGAC 99
BSNT_06232___ 100 GCTGAGCCTGTCCGCCTCGGACAAGTCAACGGCGAAACACAATACGCGCT 149
||.|||||||||||||||||..||.|||||||||||||..||||||||||
BL02502___ppa 100 GCAGAGCCTGTCCGCCTCGGCGAAATCAACGGCGAAACCGAATACGCGCT 149
BSNT_06232___ 150 TGACTATTTCAAACAAGAA--AGCCCGCGTCTTGTTGAA-ACAGCTGCAA 196
|.|..|.|||||...|||| |.||||| |||| |||| ||.|..||.|
BL02502___ppa 150 TAAGAAATTCAATGCAGAAGTACCCCGC--CTTG-TGAACACTGTCGCGA 196
BSNT_06232___ 197 ACGAAGTAAACGGCGTTATCCTGGTTGACCATAACGAACGCCAGCAAAGC 246
|.|||..|.||.||||.||..|||||||||||||.||.||||||||.|||
BL02502___ppa 197 ATGAAACAGACAGCGTGATTTTGGTTGACCATAATGAGCGCCAGCAGAGC 246
BSNT_06232___ 247 ATCAAAGACATTGAAGAGGTTCAGGTTTTAGAGGTTATCGACCATCACCG 296
.||.|.|||.|.||..||||||..||..|.||.||.||||||||.|||||
BL02502___ppa 247 GTCGATGACTTGGATCAGGTTCGCGTGCTTGAAGTCATCGACCACCACCG 296
BSNT_06232___ 297 CATCGCTAACTTTGAAAC-AGCTGAGCCGCTTTACTATCGTGCTGAGCCT 345
.|||||.||||||||||| ||| ||.||.||.||.||.||.||.||||||
BL02502___ppa 297 GATCGCCAACTTTGAAACGAGC-GACCCTCTGTATTACCGCGCAGAGCCT 345
BSNT_06232___ 346 GTAGGCTGTACGGCTACCATCTTAAACAAAATGTACAAAGAGAATAACGT 395
||||||||.|||||.||.|||||||||||..|.||.|||||.||...|||
BL02502___ppa 346 GTAGGCTGCACGGCAACGATCTTAAACAAGCTCTATAAAGAAAACGGCGT 395
BSNT_06232___ 396 GAAAATCGAGAAAGAAATTGCCGGCCTTATGCTGTCTGCGATCATTTCTG 445
..||||..|.|||||.|||||.||.||.||||||||.||||||||.||.|
BL02502___ppa 396 TGAAATTAAAAAAGATATTGCGGGGCTGATGCTGTCGGCGATCATCTCAG 445
BSNT_06232___ 446 ATTCCCTGTTATTTAAATCTCCAACTTGCACGGACCAAGACGTAGCAGCA 495
|||||||.|||||.|||||.||.||.||||||||..||||.||...|||.
BL02502___ppa 446 ATTCCCTCTTATTCAAATCCCCGACATGCACGGAAGAAGATGTCAAAGCT 495
BSNT_06232___ 496 GCAAAAGAGCTTGCGGAGATCGCTGGAGTAAATGCTGAAGAATACGGCT- 544
||||||||..|.||.|.|||.||.||.||..|||||| ||.|||
BL02502___ppa 496 GCAAAAGAATTGGCTGCGATTGCCGGCGTTGATGCTG------ACAGCTA 539
BSNT_06232___ 545 TGAAC-----ATGCTGAAAGCAGGCGCTGATCTAAGCAAAAAAACAGTGG 589
||.|| |||||||||||.||.||||||.|.|||..|||.|| |
BL02502___ppa 540 TGGACTAGATATGCTGAAAGCCGGAGCTGATTTGAGCGCAAAGAC----G 585
BSNT_06232___ 590 A----AGAGCTCATTTCTCTTGATGCGAAAGAATTTACACTCGGCAGCAA 635
| ..||||..|||||||.||.||.|||||.|||||..|.||.|||.|
BL02502___ppa 586 ATTCCTCAGCTTCTTTCTCTGGACGCAAAAGAGTTTACGATGGGAAGCCA 635
BSNT_06232___ 636 GAAAGTCGAAATCGCACAAGTAAACACAGTGGACATTGAAGATGTAAAAA 685
.|||||.||.|||||.||.||.|||||.||.||||...|.||.||
BL02502___ppa 636 TAAAGTAGAGATCGCGCAGGTTAACACTGTCGACACAAACGACGT----- 680
BSNT_06232___ 686 AA-------CGCCAAGCTGAATTAGAAGCTGTGATCT--CAAAAGTTGTG 726
|||.|||..|||.|.||.|| .||.|| ||||||..||.
BL02502___ppa 681 --TCTCTCCCGCAAAGAGGAAGTTGACGC--AGAACTTGCAAAAGCGGTA 726
BSNT_06232___ 727 GCTGAGAA-------GAATCTTGATCTGT-TCCTTCTCGTTATCACAGAT 768
.||||.|| || ||.||.||| | ||.||| |.||.||.
BL02502___ppa 727 TCTGAAAAAGGGTTGGA---TTTATTTGTGT--TTGTCG---TAACTGAC 768
BSNT_06232___ 769 ATCTTAGAAAATGATTCACTTG----CTCTTGCAATCGGTAACGAAGCAG 814
||.|||..|||.||.||..||| |.||| || || || ||||.|
BL02502___ppa 769 ATTTTAACAAACGACTCGGTTGTCGTCGCTT-CA---GG--AC-AAGCTG 811
BSNT_06232___ 815 CGAA---AGTGGAAAAAGCGTTCAACGTTACATTAGAAAACAACACAGC- 860
|..| ||||||||||||||||||.||.|||||.|.|.||||||||||
BL02502___ppa 812 CACAAGCAGTGGAAAAAGCGTTCAATGTCACATTGGCAGACAACACAGCG 861
BSNT_06232___ 861 CCTCTTAAAAGGCGTTGTTTCCCGTAAAAAACAAGTCGTTCCTGTC-TTA 909
.|.| |.|||||||||||.||.||.|||||||||.|.||||| |.| |||
BL02502___ppa 862 ACAC-TGAAAGGCGTTGTATCGCGCAAAAAACAAATTGTTCC-GCCGTTA 909
BSNT_06232___ 910 ACAGACGCAATGGCTGAA-----TAA 930
||.||.|| ||.|| |||
BL02502___ppa 910 ACCGAAGC-----CTTAAAAGGTTAA 930
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