Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00058 and BL02507

See Amino acid alignment / Visit BSNT_00058 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:42
# Commandline: needle
#    -asequence dna-align/BSNT_00058___yaaN.1.5803.seq
#    -bsequence dna-align/BL02507___yaaN.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00058___yaaN-BL02507___yaaN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00058___yaaN-BL02507___yaaN.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00058___yaaN
# 2: BL02507___yaaN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1239
# Identity:     831/1239 (67.1%)
# Similarity:   831/1239 (67.1%)
# Gaps:         123/1239 ( 9.9%)
# Score: 2658.0
# 
#
#=======================================

BSNT_00058___      1 ----------ATGAACC-----GAGACCAAA---GCG---ACCTTCATAT     29
                               ||.||||     .|.||.|||   |||   |.|||.|..|
BL02507___yaa      1 ATGAGCGAATATAAACCATCGTTACACAAAACTGGCGCACAGCTTGAATT     50

BSNT_00058___     30 AGATGAATTATTGGCAGATCCTTTTGGTGGTAACATAGAGATA---CCAG     76
                     .|||||.||..|..|.|||||||||||     |||..|||| |   ||.|
BL02507___yaa     51 TGATGATTTGCTTTCCGATCCTTTTGG-----ACAAGGAGA-AGCGCCTG     94

BSNT_00058___     77 GTTC------GGAGGCTGTAAAA---------GCAGAGAAAGAGCAAGTA    111
                     .|||      |||||    ||||         ||        |||||||.
BL02507___yaa     95 TTTCCGGCGTGGAGG----AAAAACTCCGCGGGC--------AGCAAGTG    132

BSNT_00058___    112 CGGCTTGTTGAT--GTTCTTCCTGAGGAAAACAAGGAAA-------AAGC    152
                     ...||.||||||  |||.|  ||||.|||       |||       |.||
BL02507___yaa    133 AATCTGGTTGATACGTTAT--CTGAAGAA-------AAACGCCGGCAGGC    173

BSNT_00058___    153 AATTCAGCTTGCTGGACAGATTGATCATAAAA---ATATGCAAAGCATT-    198
                     |.||||.||.||.|.|||||||||.|..||||   |||   |.|||||| 
BL02507___yaa    174 ATTTCAACTGGCCGAACAGATTGACCCGAAAAACCATA---ACAGCATTA    220

BSNT_00058___    199 GTCT-TATACGGTTCACAAGCTCAATCTAAACTGCTGAACTTTTCTCATG    247
                     .||| |||  ||..|.|||||||||||.|||||..|||||||.||.||||
BL02507___yaa    221 CTCTGTAT--GGAACGCAAGCTCAATCCAAACTCTTGAACTTCTCACATG    268

BSNT_00058___    248 ATATGATTAATCATGTTCAAAAGAAGGATGTCGGGGAGATTGGCGAAATA    297
                     |.|||.|..|.||.||.||||||||.||||||||.||.|||||..|..|.
BL02507___yaa    269 AGATGCTCGAGCACGTCCAAAAGAAAGATGTCGGTGAAATTGGGCAGGTT    318

BSNT_00058___    298 CTTGGAGAGCTGATGAAAAAGCTGGAGCAAGTAAATCCTGATGATCTCCA    347
                     .|..|.||.||.|||||||||||.||.||.||.|..||.|||||..|..|
BL02507___yaa    319 TTAAGCGACCTCATGAAAAAGCTTGAACAGGTCAGCCCCGATGAATTGAA    368

BSNT_00058___    348 ATCTAAGAAAAAGGG----TATTTTGGCACGCATGTTTGGAAGAGTATCA    393
                     |.||  ||||||.||    |.||||  |.||..||||||||||||||||.
BL02507___yaa    369 AACT--GAAAAAAGGAACTTCTTTT--CCCGTTTGTTTGGAAGAGTATCC    414

BSNT_00058___    394 AGTTCTCTTCAAGAGGTGCTGTCTAAATACCAAAAGACCAGTGTGCAGAT    443
                     ..||||.|||||||.|||.|.||.|..||.|||||.|||.|.|..||.||
BL02507___yaa    415 CATTCTGTTCAAGAAGTGTTATCAAGGTATCAAAAAACCGGCGCTCAAAT    464

BSNT_00058___    444 AGACAGAATCAGCTTGAAGCTGGAGCACTCTAAAAATGCTTTAATCAGTG    493
                     |||.|||||||||.|.||.||.|||||.||.||||..||..|.||||.||
BL02507___yaa    465 AGATAGAATCAGCGTAAAACTTGAGCATTCCAAAAGCGCGCTGATCAATG    514

BSNT_00058___    494 ACAACAAGCTGTTAGAGCAGTTATATGAAAAAAATAAAGAATATTTTGCC    543
                     |.||.|||.||.|.||.|...|.||||||||||||||||||||||.||..
BL02507___yaa    515 ATAATAAGATGCTCGAACGCCTTTATGAAAAAAATAAAGAATATTATGAG    564

BSNT_00058___    544 GCGCTGAATGTTTATATTGCTGCAGGAGAACTGAAGCTGGAGGAATTAAA    593
                     ||.||||||||.||||||||.||.||..|.||||||||.||.||||||||
BL02507___yaa    565 GCACTGAATGTCTATATTGCAGCCGGTCAGCTGAAGCTTGAAGAATTAAA    614

BSNT_00058___    594 AACGAAAACAATTCCTGAACTGAAGCAACAGGCTGAATCG---AGTGATC    640
                     ....|||||.|||||.|||.|.|   ||.||   .|||||   |.|||.|
BL02507___yaa    615 TCATAAAACCATTCCCGAATTAA---AAGAG---AAATCGAAAACTGAAC    658

BSNT_00058___    641 ATAACCAAATGGCCGTTCAAGAGGTGAATGATTTAATTCAATTTGCTGAC    690
                     ||.||||.|||||.|||||.||.||.||.|||.|.|||||.|||||.|||
BL02507___yaa    659 ATCACCATATGGCGGTTCAGGAAGTAAACGATATGATTCAGTTTGCCGAC    708

BSNT_00058___    691 CGGTTAGATAAAAGGGTGCATGATTTGTTGCTGAGCAGGCAAGTTACAAT    740
                     |||.|.||.||..||||..|.|||||...|.|||||||||||.||||..|
BL02507___yaa    709 CGGCTGGAAAAGCGGGTTTACGATTTAACGTTGAGCAGGCAAATTACGCT    758

BSNT_00058___    741 TCAAAGTGCACCGCAAATCAGGCTGATTCAAAATACAAACCAAGCGTTAG    790
                     .||.||.||.|||||||||.|..|||||||..|.|||||.||||.|.|.|
BL02507___yaa    759 GCAGAGCGCCCCGCAAATCCGTTTGATTCAGCACACAAATCAAGTGCTGG    808

BSNT_00058___    791 CTGAAAAGATTCAGTCATCCATTGTGACAGCGATTCCGTTATGGAAAAAT    840
                     |.|||||||||||.||.||.|||.|||||||.||.||..|.||||||||.
BL02507___yaa    809 CGGAAAAGATTCAATCTTCGATTATGACAGCAATCCCTCTTTGGAAAAAC    858

BSNT_00058___    841 CAAGTTGCCATTGCGCTGACGCTTTTAAGGCAGCGCAATGCAGTGGATGC    890
                     ||.|||||.||||||||.||.||.||.|||||||||...|||||.||.||
BL02507___yaa    859 CAGGTTGCTATTGCGCTCACCCTGTTGAGGCAGCGCCGAGCAGTAGAGGC    908

BSNT_00058___    891 ACAACAGAAAGTATCTGATACAACCAATGAGCTTTTGCTGAAAAATGCGG    940
                     .|||.|..|.||.||.|..|||||.||.||.||..|..||||||||||.|
BL02507___yaa    909 TCAAAAACAGGTGTCGGCCACAACAAACGAACTGCTCTTGAAAAATGCCG    958

BSNT_00058___    941 AGCTTTTAAAAACCAATACAATTGAAACTGCACGGGCAAATGAAAGAGGC    990
                     ||.|..|.||..|||||||.||.|||||.|||..||.|||||||.|||||
BL02507___yaa    959 AGATGCTGAAGGCCAATACGATCGAAACGGCAAAGGAAAATGAACGAGGC   1008

BSNT_00058___    991 CTTGTTGATATAGATACCTTGAAGAAGGTGCAGGA-AAGCTTAATAAGCA   1039
                     .||.|||||||.||.||.|||||..|.|||||||| ||.| |.||..|.|
BL02507___yaa   1009 TTTATTGATATTGAAACATTGAAACAAGTGCAGGACAATC-TGATCGGTA   1057

BSNT_00058___   1040 CGCTTGAAGAAACACTGACTATACAAGAAGAAGGACGAATCAAA-CGCCG   1088
                     |.|||||.||.||.||.|..||.|||||.|||||.|| .||||| ||.|.
BL02507___yaa   1058 CACTTGAGGAGACGCTTAAAATTCAAGAGGAAGGCCG-TTCAAAGCGGCT   1106

BSNT_00058___   1089 TCAGGCAGAAGAAGAGCTCATGATGATGGAAGGCGACCTGAAGCAAAAGC   1138
                     .||||||||||||||..|.|.|...|||||||..|..||.|||...||||
BL02507___yaa   1107 GCAGGCAGAAGAAGAAATAAGGGCAATGGAAGATGGTCTCAAGGCTAAGC   1156

BSNT_00058___   1139 TGCT-TACAATAAAGGAAA--------GATAG-------   1161
                     |||| .|||..||||.|||        | |||       
BL02507___yaa   1157 TGCTGGACATGAAAGAAAACCAAAACCG-TAGATCATAA   1194


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