Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00060 and BL02509
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:42
# Commandline: needle
# -asequence dna-align/BSNT_00060___tmk.1.5803.seq
# -bsequence dna-align/BL02509___tmk.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00060___tmk-BL02509___tmk.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00060___tmk-BL02509___tmk.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00060___tmk
# 2: BL02509___tmk
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 677
# Identity: 466/677 (68.8%)
# Similarity: 466/677 (68.8%)
# Gaps: 76/677 (11.2%)
# Score: 1524.0
#
#
#=======================================
BSNT_00060___ 1 ATGAGCGGTTTATTTATTACATTCGAAGGTCCTGAAGGTGCAGGAAAAAC 50
||||.|||||||||||||||.||.|||||.|||||||||||.||.|||||
BL02509___tmk 1 ATGAACGGTTTATTTATTACTTTTGAAGGGCCTGAAGGTGCGGGGAAAAC 50
BSNT_00060___ 51 GACTGTTCTGCAGG-------AGATCAAAAACATACTGACAGCAGAA-GG 92
|||..|.||.|||| |||.|| |.|||| |.|.|| ||
BL02509___tmk 51 GACAATCCTTCAGGCTGCGGCAGACCA-------ATTGAC-GAAAAACGG 92
BSNT_00060___ 93 CC-TTCAGGTTATGGCAACTCGAGAGCCAGGCGGAATAGATATTGCAGAA 141
|| ||| .|||.|.||.||..|.|||||.|||||.||.||.||..|||||
BL02509___tmk 93 CCATTC-TGTTCTTGCGACAAGGGAGCCGGGCGGCATTGAAATATCAGAA 141
BSNT_00060___ 142 CAAATTCGAGAGGTTATTCTGAATGAGAACAACACATTAATGGACCCAAA 191
|.||||||.|||||||||.|.|||...|.|.|.|||..||||||.||.||
BL02509___tmk 142 CGAATTCGCGAGGTTATTTTAAATCCAAGCCATACAGCAATGGATCCCAA 191
BSNT_00060___ 192 AACAGAAGCTCTCTTATATGCGGCTGCAAGGCGCCAGCATTTAGTTGAAA 241
||||||.||..|.||.||||||||.|||||..|.|||||..||||.||||
BL02509___tmk 192 AACAGAGGCCTTGTTGTATGCGGCCGCAAGAAGGCAGCACCTAGTCGAAA 241
BSNT_00060___ 242 AAGTAAAACCTGCTTTAGAACAGGGGTTTATCGTTCTT-TGCGACAGATT 290
||||||||||.||..|.|||.|.|||...|||| |||| ||||||.|.||
BL02509___tmk 242 AAGTAAAACCGGCGCTTGAAGAAGGGAAAATCG-TCTTATGCGACCGGTT 290
BSNT_00060___ 291 TATAGACAGTTCTCTTGCGTATCAAGGATATGCAAGAGGACTTGGAATTG 340
.||.|||||.||.|||||.|||||.||.|||||.||.|||||.||.||||
BL02509___tmk 291 CATCGACAGCTCGCTTGCTTATCAGGGGTATGCCAGGGGACTCGGCATTG 340
BSNT_00060___ 341 ATGAGG----TTCTGTCGATTAATGAATTTGCCATTGG-AGATATGATGC 385
||||.| ||||| |||||.||||.||.||.|| || ..||||||
BL02509___tmk 341 ATGAAGTATTTTCTG----TTAATCAATTCGCGATCGGCAG-CCTGATGC 385
BSNT_00060___ 386 CCCATGTAACGGTTTATTTTTCAATTGATCCGGAAGAAGGACT-----GA 430
|..||||.|||.|||||||....|||||.||||||||.|||.| ||
BL02509___tmk 386 CGAATGTGACGATTTATTTCGACATTGACCCGGAAGAGGGAATCAAACGA 435
BSNT_00060___ 431 AGCGTATTTACGCAAACGGCTCACGGGAGAAAAACAGGCTCGATTTAGAA 480
|.|| |||| |||.|...||.|.|||||||||.||||.|||||.|||
BL02509___tmk 436 ATCG-ATTT----AAATGATGCAAGAGAGAAAAACCGGCTTGATTTGGAA 480
BSNT_00060___ 481 AAACTGGACTTTCATACA-AAAGTACAAGAAGGTTATCAAGAGCTGATGA 529
|||||..|||||||| || ...||.|||.||||.||..||||..|.||||
BL02509___tmk 481 AAACTCCACTTTCAT-CAGCTTGTTCAAAAAGGCTACGAAGAAGTTATGA 529
BSNT_00060___ 530 AGCGATTTCCGGAAAGATTTC--ATTCAGTTGATGCCGGGCAATCCAAAG 577
|.||.||.||.|.|.|||||| ||| ||.|||||| |.||||||
BL02509___tmk 530 ACCGGTTCCCCGGACGATTTCGGATT--GTGGATGCC-----AGCCAAAG 572
BSNT_00060___ 578 GCCTCGTCGTTCAGGA-----TGTTCTAAAGG----------TGATCGAT 612
.||| || ||||..||||| |.||.||.
BL02509___tmk 573 -------TGTT---GAACTTGTGTTAAAAAGGGTAAATAACATCATTGAG 612
BSNT_00060___ 613 GAAGCGTTGAAAAAAATTCAATTGTGA 639
|||||.||.|||.|||.|||.||||||
BL02509___tmk 613 GAAGCATTAAAAGAAAATCAGTTGTGA 639
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