Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04561 and BL02517

See Amino acid alignment / Visit BSNT_04561 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:43
# Commandline: needle
#    -asequence dna-align/BSNT_04561___yuaE.1.5803.seq
#    -bsequence dna-align/BL02517___yuaE.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04561___yuaE-BL02517___yuaE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04561___yuaE-BL02517___yuaE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04561___yuaE
# 2: BL02517___yuaE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 525
# Identity:     337/525 (64.2%)
# Similarity:   337/525 (64.2%)
# Gaps:          75/525 (14.3%)
# Score: 1028.5
# 
#
#=======================================

BSNT_04561___      1 ATGATGAGTATCTTTAATGAAGCCAGATTAGAAACGTGGAACGA-ATTGA     49
                        |||||.||.|||||||||||.|||..||||...||||.||| ||| .
BL02517___yua      1 ---ATGAGCATTTTTAATGAAGCGAGAAAAGAACTTTGGAGCGAGATT-C     46

BSNT_04561___     50 AAGGACTTTCTGACGAAAAGCTGAATCAAAAGCCTTCTGCTGAAGAATGG     99
                     ||||.||.||.|||||||.|||||||.|||.|||..|.|..||.||||||
BL02517___yua     47 AAGGCCTATCAGACGAAATGCTGAATAAAAGGCCGGCGGAAGACGAATGG     96

BSNT_04561___    100 AGCATACGGGAAGTTCTTGACCATTTGAAAAAAATCGATATGACCGCACA    149
                     |||||.|..|||||..|.|||||..||||||||||||||.|||..||||.
BL02517___yua     97 AGCATTCAAGAAGTGATCGACCACCTGAAAAAAATCGATCTGATGGCACT    146

BSNT_04561___    150 AAAAATGTTGAAGGAACGTGTAAAGGACGCTCCGATTAAAGAAATTGAAG    199
                     ..||||.||||||||||...|.||..|.||.|||.|||||..|||.||||
BL02517___yua    147 TCAAATCTTGAAGGAACAAATCAAACATGCACCGGTTAAATCAATCGAAG    196

BSNT_04561___    200 AAAAATCGCTTGAGGTCGCA-CAG------GACAGAAATAATAAACGGAA    242
                     |.|||.||.||       || |||      |||||||.....|||||.||
BL02517___yua    197 ATAAACCGGTT-------CATCAGTTGGAAGACAGAAGCTCCAAACGAAA    239

BSNT_04561___    243 AGCCCCGAGTC---ATCTTGAGC------------CTGCGCATGATTTTA    277
                     .||.||   ||   ||...||||            |.|||.|||.|||  
BL02517___yua    240 GGCGCC---TCCATATGCGGAGCCGGAAAGAAAAACAGCGGATGCTTT--    284

BSNT_04561___    278 TTTCAGGCAGCCAAATGAAACGTGAGCTTGATGTGGTAAGAGAGCAGCTG    327
                             |.||  .|.|||..||||||.||....||.|||...||..|.
BL02517___yua    285 --------AACC--CTCAAAGCTGAGCTCGACAATGTCAGAACACAATTA    324

BSNT_04561___    328 ACTGCTGCGATTGCC-TCTCTGAAAGAAGAAGATTTTGAAAGAGTGCTTC    376
                     |||.|.|..||.||| .||.|.|.| |.|||||||||.||||.|||||.|
BL02517___yua    325 ACTTCAGTCATCGCCGCCTTTCACA-ATGAAGATTTTCAAAGGGTGCTGC    373

BSNT_04561___    377 CGCATCCTGTGTTTC-AAGAGCTGACTGTCAGACAGTGGATCGATTTTAT    425
                     ||||||| |..|||| |||||||.||.|||||.||||||.||||.||.||
BL02517___yua    374 CGCATCC-GATTTTCGAAGAGCTTACGGTCAGGCAGTGGCTCGACTTCAT    422

BSNT_04561___    426 CGGCCATCATGAAAAACGGCACCTCAGCCAAATGAAAGAAATTAAAGAA-    474
                     ||||||||||||||.|         ||.||.||.|||.|.||.|||||| 
BL02517___yua    423 CGGCCATCATGAAAGA---------AGACATATTAAACAGATCAAAGAAG    463

BSNT_04561___    475 --AAGATAGAAAGGGCCTGA-----    492
                       ||| .|||||    |||.     
BL02517___yua    464 TCAAG-CAGAAA----CTGCTGTAA    483


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