Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02245 and BL02521
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:45
# Commandline: needle
# -asequence dna-align/BSNT_02245.1.5803.seq
# -bsequence dna-align/BL02521___ykoP.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02245-BL02521___ykoP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02245-BL02521___ykoP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02245
# 2: BL02521___ykoP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 682
# Identity: 396/682 (58.1%)
# Similarity: 396/682 (58.1%)
# Gaps: 170/682 (24.9%)
# Score: 1271.5
#
#
#=======================================
BSNT_02245 1 ATGACAGTCCTCCTAAAAAAATATGGCAACTATATTTTGAGGAGAACGTT 50
BL02521___yko 0 -------------------------------------------------- 0
BSNT_02245 51 CACAAAATATAAGGGTGTTTTTGATCATAAGGAAGGTGAAAAGATGA-AA 99
.||| ||
BL02521___yko 1 -------------------------------------------TTGAGAA 7
BSNT_02245 100 ACTTGTTTCCTTTCCATATGGAGAGTGGTTGACCCGATTTATTTCTTTTT 149
|| |||||..|.||.||.|||||.||..||||||||.||||||..|||||
BL02521___yko 8 AC-TGTTTTTTGTCAATTTGGAGTGTAATTGACCCGTTTTATTATTTTTT 56
BSNT_02245 150 TTCAAGGCTGACCTTGGTTGA-CAAAGATCGTAAA--AGCGTCTTTCGAG 196
||||||.|||||..|..|||| |||| ||.||| |||.|.|||||.|
BL02521___yko 57 TTCAAGACTGACACTCATTGACCAAA---CGAAAACGAGCATTTTTCGCG 103
BSNT_02245 197 TCAGGCTGACGAAGTACAAAGGACATC-ATGTCGTGCTTAGCGACGGAAC 245
||.|.||.||.||||||||||| .||| ||||.|||.|.|||||.||.||
BL02521___yko 104 TCCGTCTAACAAAGTACAAAGG-GATCGATGTGGTGTTAAGCGATGGGAC 152
BSNT_02245 246 GCATA-TAAGAAAAAATGATGTGCTCGTTAAAATCCACCTGCATAACATA 294
|..|| |||| |||||.|||||.||..|.|||||.||.|||||.||.||.
BL02521___yko 153 GGTTATTAAG-AAAAACGATGTTCTGATCAAAATTCATCTGCACAATATT 201
BSNT_02245 295 AAGCTGATCAGGGAGCTGCAAAGCATTGAGAGCGCAGTCAGAA-AGGGAA 343
||||||||||.||||||.||||..|||||||||||.|||.||| |||.|.
BL02521___yko 202 AAGCTGATCAAGGAGCTTCAAAATATTGAGAGCGCTGTCGGAAGAGGCAT 251
BSNT_02245 344 TCATTATTTATCAGAAAGTATATCAATCGATGCCGCTTCTTTTG---GAT 390
|| |.||||||||.||||..|||...||.|||||| .|.||| ||.
BL02521___yko 252 TC-TCATTTATCAAAAAGCGTATTTTTCAATGCCG---ATCTTGGCCGAA 297
BSNT_02245 391 TACATCAATAATCA--------CAAAAAAAGTGAAAAAATTAAAGGGATT 432
||.|||||.||||| || ||..||||||||||.||.
BL02521___yko 298 TATATCAAAAATCATCACCGGTCA--------GACCAAATTAAAGGCATC 339
BSNT_02245 433 GTGGGCATTACAATGCTTGACAAAGGTGTGGAAAGGCTCGGTTTTGATGT 482
.|.|||||.||.|.|||..|.|||||.||.||.||||||||||||||.|.
BL02521___yko 340 ATCGGCATCACTACGCTGCATAAAGGAGTTGAGAGGCTCGGTTTTGAAGC 389
BSNT_02245 483 GGTCACCCCGGTCAACCCTTTTTACAG-GTGCTTTAAAAAGATCACACAT 531
|||....||.|..||||..|||||||| ||| ||.||.|||.|.||.||.
BL02521___yko 390 GGTTGAGCCTGCGAACCAGTTTTACAGAGTG-TTCAAGAAGCTGACGCAG 438
BSNT_02245 532 ATACCGATTTTTTATCTCACTTCAAAGCAGGTGAGCTTGCGGCGTTTAC- 580
||.|||||.||.|||.|.||..||||||| .|||.|
BL02521___yko 439 ATTCCGATCTTATATTTAACAACAAAGCA--------------ATTTTCT 474
BSNT_02245 581 ---CGAATACATCC-----------TATTTGTTTATTTCGAAAGAAAAGC 616
||.| |.|||| |||||||||||||||||||||||..
BL02521___yko 475 CTTCGCA-AAATCCCCCCTTCCCAATATTTGTTTATTTCGAAAGAAAAAT 523
BSNT_02245 617 TGCAGAAAACCTAT---CAAAAAAAAGACTGA 645
||...||..||||| ||.|||.||
BL02521___yko 524 TGTTCAAGTCCTATCTGCAGAAATAA------ 549
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