Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04633 and BL02532
See
Amino acid alignment /
Visit
BSNT_04633 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:46
# Commandline: needle
# -asequence dna-align/BSNT_04633___patB.1.5803.seq
# -bsequence dna-align/BL02532___patB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04633___patB-BL02532___patB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04633___patB-BL02532___patB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04633___patB
# 2: BL02532___patB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1244
# Identity: 827/1244 (66.5%)
# Similarity: 827/1244 (66.5%)
# Gaps: 160/1244 (12.9%)
# Score: 2552.0
#
#
#=======================================
BSNT_04633___ 1 ATGAACTTTGATAAACGAGAAGAAC-GCCTTGGCACCCAATCGGTCAAAT 49
|||.|.|||.|||.| |||.|.||| |.|..||.|||||.||.||.||.|
BL02532___pat 1 ATGGATTTTAATACA-GAGCATAACAGACGCGGGACCCAGTCTGTAAAGT 49
BSNT_04633___ 50 GGGAC--AAAACAGGCGAATTATTTGGCGTGACAGACGCACTCCCGATGT 97
||||| ||.|||| ||||||||.|||||.|..|||||.||.||.||||
BL02532___pat 50 GGGACTTAACACAG--GAATTATTCGGCGTAAATGACGCGCTTCCAATGT 97
BSNT_04633___ 98 GGGTGGCGGATATGGATTTTCGCGCGCCAGAAGCAATAACTGAAGCGTTA 147
|||||||.||||||||||||||.||.||..|..|..|.|.|||.||..|.
BL02532___pat 98 GGGTGGCTGATATGGATTTTCGTGCCCCTCAGCCTGTTATTGACGCCCTT 147
BSNT_04633___ 148 AAAGAGCGTCTTGACCACGGTATTTTTGGTTATACAACTCCAGATCAAAA 197
.|..||||.||.||.|||||..||||.||.||||||.||.| ||
BL02532___pat 148 CAGCAGCGCCTGGAGCACGGGGTTTTCGGCTATACATCTGC-------AA 190
BSNT_04633___ 198 A-------ACGAGGGATGCTGTGTGCGGATGGATGCAAAACA------GG 234
| ||||.|||.|||||...||..|||.| || ||
BL02532___pat 191 ACGCGGGCACGAAGGAAGCTGTCACCGATTGGCT------CAGCCGCCGG 234
BSNT_04633___ 235 CACGGCTGGAA-GGTGAATCCGGAAAGC----ATCACATTCAGCCCCGGC 279
|||||.||||| ..|||| ||| || |||||.||||||||.|||
BL02532___pat 235 CACGGATGGAATACTGAA-CCG----GCGTTTATCACCTTCAGCCCGGGC 279
BSNT_04633___ 280 GTTGTAACGGC-CTTGAGCATGGCGGTACAAGCTTTTACGGAGCCGGGCG 328
.|||||||.|| ||.|..|| .|||||.||.||.|..||.|||||.||||
BL02532___pat 280 ATTGTAACAGCGCTCGCCCA-AGCGGTTCAGGCGTACACAGAGCCTGGCG 328
BSNT_04633___ 329 ATCAAGTAGTTGTTCAGCCTCCAGTTTATACGCCTTTTTACCATATGGTG 378
|.|..||.||.||.|||||.||.||.||||||||.||.|...||||.||.
BL02532___pat 329 AGCGGGTGGTCGTACAGCCGCCTGTATATACGCCGTTCTTTGATATAGTT 378
BSNT_04633___ 379 GAGAAAAACGGCCGGCACATTTTACATAATCCGCTGCTAGAAGAAGACGG 428
||.||||||||.|||....|||||||||||||..|..|.|||.|||||||
BL02532___pat 379 GAAAAAAACGGGCGGGTTGTTTTACATAATCCATTAATCGAAAAAGACGG 428
BSNT_04633___ 429 -CGCATATGCAATGGATTTTGAAGATTTGGAGACGAAGCTTAGTG--ACC 475
||| ||||.||||||||||...||..|.||.|..|||||| ||| |||
BL02532___pat 429 CCGC-TATGAAATGGATTTTTCCGACCTTGAAAAAAAGCTT-GTGGAACC 476
BSNT_04633___ 476 ------CAAGCGTTACATTGTTTATTTTATGCAATCCTCATAACCCTTCT 519
||||| ||||.|||.|.||||||||.|||||||||||.
BL02532___pat 477 GGATGTCAAGC-------TGTTCATTCTTTGCAATCCGCATAACCCTTCC 519
BSNT_04633___ 520 GGGCGTTCATGGGGCCGGGAAGATTTACTG---AAGCTAGGCGAATTGTG 566
||.||||||||| ..|.||||...|||| |.|||.||||||.|.||
BL02532___pat 520 GGCCGTTCATGG---TCGAAAGAGGAACTGACAACGCTTGGCGAACTCTG 566
BSNT_04633___ 567 CCTTGAGCATGGCGTAACAGTTGTATCGGATGAAATCCATTCCGATTTAA 616
||||.|.||.||.||.||||||||.||.||.||||||||.||.||..|.|
BL02532___pat 567 CCTTAAACACGGTGTCACAGTTGTTTCCGACGAAATCCACTCGGACCTGA 616
BSNT_04633___ 617 TGCTGTACGGACACAAACACACGCCGTTCGCTTCGCTCTCTGACGATTTC 666
|||||.||||||..||.||.|||||||||||.||..|.|||...||.|||
BL02532___pat 617 TGCTGAACGGACTGAACCATACGCCGTTCGCCTCTTTATCTCCGGAATTC 666
BSNT_04633___ 667 GCTGATATTTCTGTGACATGTGCTGCTCCAAGCAAAACATTTAATATCGC 716
||.|||||.||..|.|||||...|||.||.||||||||.|||||..|.||
BL02532___pat 667 GCGGATATATCCATCACATGCATTGCACCGAGCAAAACGTTTAACTTGGC 716
BSNT_04633___ 717 CGGATTGCAGGCTTCAGCGATCATTATTCCGGATC---GCCTGAAGCG-- 761
|||.||||||||.|||||.|||||.||.||.|| | || ||||.|
BL02532___pat 717 CGGGTTGCAGGCCTCAGCCATCATCATACCCGA-CAAAGC--GAAGAGAA 763
BSNT_04633___ 762 -CGCCAAGTTTTCCGCAA---GCCTTCAGCGCAATGG---------TTTA 798
|||| ||| |||| .|.|.|||||..|.|| ||||
BL02532___pat 764 CCGCC----TTT--GCAAAGGTCATGCAGCGTCAGGGACTGCATTCTTTA 807
BSNT_04633___ 799 GGCGGAATGAAC----GCGTTTGCCGTCACTGCAATCGAAGCCGCGTATT 844
||| || |||.||| |.||.|||||.||.||.||||
BL02532___pat 808 -----AAT--ACATTTGCGATTG------CAGCCATCGAGGCGGCCTATT 844
BSNT_04633___ 845 CAAAAGGCGGACCGTGGCTTGATGAATTGATCACTTACATTGAGAAAAAC 894
|||||||||.|||.|||||.|||.|..|.|||.|.||||||||...|||.
BL02532___pat 845 CAAAAGGCGAACCATGGCTCGATCAGCTTATCCCATACATTGAACGAAAT 894
BSNT_04633___ 895 ATGAACGAAG-----CGGAAGCCTTTTTGAGCA-CCGAGCTGCCAAAGGT 938
|||.|.|||| || ||||||| ||| ..||||||||..||||
BL02532___pat 895 ATGGAAGAAGTCCGCCG-----CTTTTTG-GCAGAGGAGCTGCCCGAGGT 938
BSNT_04633___ 939 CAAAATGATGAAGCCGGATGCATCATACTTGATTTGGCTCGACTTC--AG 986
|...||||||.||||.||.||.||.||||||...|||||.||||.| |.
BL02532___pat 939 CCGCATGATGGAGCCTGACGCCTCTTACTTGGCATGGCTTGACTGCCGAA 988
BSNT_04633___ 987 CGCTTACGGCTTGTCCGATACA-GAGCTCCAGCAAA----GAATGCTAAA 1031
.||| |||.|||||.||| || || ||.|||| ...|.||..|
BL02532___pat 989 AGCT--CGGATTGTCGGAT-CAGGA----CATCAAACGGCTTCTCCTTCA 1031
BSNT_04633___ 1032 AAAAGGAAAAGTTATTTTAGAGCCCGGGA-CGAAATACGGGCCTGGCGGA 1080
.||||||||..|.|||.|.||| |||||| ||||.|||||.||.||||||
BL02532___pat 1032 TAAAGGAAAGCTGATTCTTGAG-CCGGGACCGAAGTACGGACCGGGCGGA 1080
BSNT_04633___ 1081 GAAGGATTTATGCGCC----TGAACGCGGGATG------CTCTCTTGCAA 1120
|||||||| ||.| ||||.|..||||| ||||.|||.||
BL02532___pat 1081 GAAGGATT----CGTCAGAATGAATGTCGGATGTTCGCTCTCTGTTGTAA 1126
BSNT_04633___ 1121 CCCTGCAGGACGGCCTGCGCCGCATCAAAGCCGCATTATCGTAA 1164
|.|||||.||.||.||..|.||..||||.||.||||||
BL02532___pat 1127 ------AAGACGGACTCCGACGTCTGAAGACCGCTTTTTCGTAA 1164
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.