Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04649 and BL02543

See Amino acid alignment / Visit BSNT_04649 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:48
# Commandline: needle
#    -asequence dna-align/BSNT_04649___maeN.1.5803.seq
#    -bsequence dna-align/BL02543___maeN.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04649___maeN-BL02543___maeN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04649___maeN-BL02543___maeN.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04649___maeN
# 2: BL02543___maeN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1397
# Identity:    1009/1397 (72.2%)
# Similarity:  1009/1397 (72.2%)
# Gaps:         103/1397 ( 7.4%)
# Score: 3530.5
# 
#
#=======================================

BSNT_04649___      1 ATGGGAGCAATTCCAAAAACGGGGACAATTT--CACCTGAGCAAAAAGAC     48
                     ||||.||||   .|||||        .||||  .||| ||..|.|||   
BL02543___mae      1 ATGGAAGCA---GCAAAA--------GATTTGAAACC-GATTACAAA---     35

BSNT_04649___     49 TCACAGG------AGAAAAACCTGTTTCAAAAAATT----------TGGT     82
                     |||| ||      ||||||       |.||||.|||          ||.|
BL02543___mae     36 TCAC-GGTCATAAAGAAAA-------TAAAAATATTTTCCATAAGCTGAT     77

BSNT_04649___     83 C--TTGGGAAATCGGTGTGATTCCTTTGCCATTATACACAGTATT-----    125
                     |  .|||.|||||||.||||||||.||.||..||||     ||||     
BL02543___mae     78 CAACTGGAAAATCGGCGTGATTCCGTTTCCGCTATA-----TATTGCGCT    122

BSNT_04649___    126 --AGCTGTTATTATTATTCTTGCAGCCTATTACAATGAGCTGCCGGCAAA    173
                       .||||  |||.||.||||.|||||.||.|..|||||..|||||   ||
BL02543___mae    123 TGCGCTG--ATTGTTTTTCTGGCAGCTTACTTTAATGAATTGCCG---AA    167

BSNT_04649___    174 T---ATGCTTGGCGGGTTTGCCATCATTATGATTCTTGGTGTGTTTCTCG    220
                     |   |||||.|||||.||.||..|||||||||||||.||..|.|||||||
BL02543___mae    168 TGACATGCTCGGCGGTTTCGCGGTCATTATGATTCTCGGCATTTTTCTCG    217

BSNT_04649___    221 GAGACATAGGCCAACGCATACCGATATTGAAGGATATTGGCGGCCCTGCT    270
                     |.||..|.||.||.|||||.|||||.||.||.|||||.|||||.|||||.
BL02543___mae    218 GGGATGTCGGACAGCGCATTCCGATTTTAAAAGATATCGGCGGACCTGCC    267

BSNT_04649___    271 ATTTTATCTTTGTTTGTTCCTTCATTTTTAGTCTTTTACAATGTACTGAA    320
                     |||.||||..|||||||||||||.||.||||||||||.|||.||.||.||
BL02543___mae    268 ATTCTATCGCTGTTTGTTCCTTCGTTCTTAGTCTTTTTCAAAGTGCTTAA    317

BSNT_04649___    321 TTCAACATCTTTAGACGCTGTAACCAAC-TTGATGAAAACGTCTAACTTC    369
                     ..|..|||||.|.||.||.||.| |||| ||||||||||||||.||.|||
BL02543___mae    318 CCCTGCATCTATGGAAGCGGTTA-CAACTTTGATGAAAACGTCAAATTTC    366

BSNT_04649___    370 CTTTATTTCTATATCGCTTGCCTTGTTGTGGGAAGTATCCTCGGTATGAA    419
                     .|.||||||||.|||||.||..|.||.|.|||||||||..|.||.|||.|
BL02543___mae    367 TTGTATTTCTACATCGCATGTTTAGTCGCGGGAAGTATTTTAGGAATGCA    416

BSNT_04649___    420 CAGAATTGTTTTAATACAGGGGTTTATCAGAATGTTCGTTCCACTGGTTG    469
                     ..|.|..|||.|.||.||.||.|||||.||||||||||||||..||.|.|
BL02543___mae    417 TCGCACGGTTCTGATTCAAGGTTTTATGAGAATGTTCGTTCCGTTGTTGG    466

BSNT_04649___    470 CAGGAACGATCGCGGCCGTTGCAGCCGGCATCCTTGTCGGATTTATT-TT    518
                     |.||.||||||||.||.|||||.|||||.||.||.||||| |.|.|| ||
BL02543___mae    467 CCGGGACGATCGCAGCGGTTGCCGCCGGTATTCTCGTCGG-TCTGTTATT    515

BSNT_04649___    519 TGGCTATAGTGCCTATGATTCCTTTTTCTTTGTTGTTGTCCCGATTATTG    568
                     ||||||.||..|.|||||..|.||.||||||.||.||||.||||||||||
BL02543___mae    516 TGGCTACAGCCCTTATGAAGCTTTCTTCTTTATTATTGTACCGATTATTG    565

BSNT_04649___    569 CCGGGGGAATAGGCGAAGGAATTTTGCCGCTTTCAATCGCCTACTCACAA    618
                     ||||.||.||.||||||||.||..|||||||.|||.||||||||||.|||
BL02543___mae    566 CCGGAGGCATCGGCGAAGGCATCCTGCCGCTGTCACTCGCCTACTCGCAA    615

BSNT_04649___    619 ATACTGGGCTCA-TCTGCTGATGTATTTGTGTCTCAGCTGGTTCCAGCAG    667
                     ||..|||| .|| ||..|.|||||||||||.||.|||||..||||.||.|
BL02543___mae    616 ATTTTGGG-ACAGTCCACCGATGTATTTGTTTCACAGCTCATTCCGGCCG    664

BSNT_04649___    668 CAATTATAGGAAATGTTTTTGCTATCATATGTGCAGCC---TTAATGAAA    714
                     |.|||||.|||||.||..||||.|||||.|   |||||   .|.||||||
BL02543___mae    665 CTATTATCGGAAACGTCGTTGCCATCATCT---CAGCCGGACTGATGAAA    711

BSNT_04649___    715 AAGCTTGGCGATAAGCGTCCAGATCTAAACGGGAACGGACGTCTCGTAAA    764
                     ||||||||.||.||||||||.||.||.|||||.|||||..|.|||||.||
BL02543___mae    712 AAGCTTGGGGAAAAGCGTCCTGAACTGAACGGTAACGGCAGACTCGTTAA    761

BSNT_04649___    765 ATCTAAAAAAGCAAATGAGATTTTCAATCAAAAAGAAGCCGAAGCAAAAA    814
                     |||.|||||||...||||.||||||||.||||||||||..||..|.||||
BL02543___mae    762 ATCGAAAAAAGACGATGAAATTTTCAACCAAAAAGAAGAGGAGCCGAAAA    811

BSNT_04649___    815 TTGATTTCAAATTAATGGGAGCAGGAGTTCTGCTCGCGTGTACATTCTTT    864
                     |.||.||.|||||||||||.||.||.|||.|..||||.|||.|.|||||.
BL02543___mae    812 TCGACTTGAAATTAATGGGTGCCGGCGTTTTAATCGCATGTTCCTTCTTC    861

BSNT_04649___    865 ATTTTTGGCGGGTTATTGGAGAAATTCATCTTCATCCCGGGCGCGATCTT    914
                     |||||.|||||.||..|....||.||||||...||.|||||.||||||.|
BL02543___mae    862 ATTTTCGGCGGTTTGGTCTCCAAGTTCATCGCGATTCCGGGAGCGATCCT    911

BSNT_04649___    915 AATGATTATTTCAGCTGCGGCTGTCAAGTATGCAAATATTCTTCCGAAAA    964
                     .|||||.||..||||.||.||.||.||.||||||||..||||.||...||
BL02543___mae    912 GATGATCATCGCAGCGGCTGCCGTAAAATATGCAAAGCTTCTGCCTGCAA    961

BSNT_04649___    965 AAATGGAAGAAGGCGCTTACCAGCTTTATAAGTTTATTTCTTCAAGCTTT   1014
                     ..||||||.||||||||.||||||||||.|||||.||.||.||||||||.
BL02543___mae    962 GCATGGAAAAAGGCGCTCACCAGCTTTACAAGTTCATGTCATCAAGCTTC   1011

BSNT_04649___   1015 ACATGGCCGCTGATGGTCGGTCTCGGCATCCTCTTTAT-TCCGT-TGGAT   1062
                     ||.|||||||||||||||||.||||||||  ||||||| |||.| |.|||
BL02543___mae   1012 ACTTGGCCGCTGATGGTCGGGCTCGGCAT--TCTTTATATCCCTCTTGAT   1059

BSNT_04649___   1063 GACGTAGCGTCTGTGATTTCTATACCGTTTG----TCAT---CATCTGTA   1105
                     ||.||.||||||||.|||||    ||   ||    ||||   |.||||..
BL02543___mae   1060 GATGTGGCGTCTGTTATTTC----CC---TGCGCTTCATCGCCGTCTGCG   1102

BSNT_04649___   1106 TTTCAGTTGTTATCGCGATGATTGGT----TCTGGATATTTCGTAGGCAA   1151
                     .||||||.||.||.||.|    ||||    ||.||.||.||.||.||.||
BL02543___mae   1103 CTTCAGTCGTCATTGCCA----TGGTGACATCAGGCTACTTTGTCGGAAA   1148

BSNT_04649___   1152 GCTGATGAACATGTATCCGGTTGAATCCGCAATCGTTACCTGCTGCCACA   1201
                     ..|.|||||||||||.||.||||||||.||.|||||.||..||||.||||
BL02543___mae   1149 ATTAATGAACATGTACCCTGTTGAATCAGCGATCGTCACAGGCTGTCACA   1198

BSNT_04649___   1202 GCGGCCTCGGCGGAACGGGTGATGTTGCCATTTTATCGGCATCAGGAAGA   1251
                     ||||.||||||||.|||||.||.||.||||||.|.|||||.|||||..|.
BL02543___mae   1199 GCGGTCTCGGCGGCACGGGGGACGTGGCCATTCTTTCGGCTTCAGGCCGG   1248

BSNT_04649___   1252 ATGGGCCTTATGCCGTTTGCCCAAATTTCAACCCGTCTCGGCGGTGCAGG   1301
                     |||||.||.|||||||||||.|||||.|||||.|||||||||||.|||..
BL02543___mae   1249 ATGGGTCTGATGCCGTTTGCGCAAATCTCAACGCGTCTCGGCGGGGCATC   1298

BSNT_04649___   1302 CACAGTTATT-TGCGCGACAGTGCTGCTTCGTTTTTTCACTTCATAA   1347
                     |||.||.||| || |||||.||..|.||..|.||.|||||.||.|||
BL02543___mae   1299 CACCGTCATTATG-GCGACCGTTTTACTGAGGTTCTTCACCTCGTAA   1344


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