Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04627 and BL02595

See Amino acid alignment / Visit BSNT_04627 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:46
# Commandline: needle
#    -asequence dna-align/BSNT_04627___alaR.1.5803.seq
#    -bsequence dna-align/BL02595___alaR.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04627___alaR-BL02595___alaR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04627___alaR-BL02595___alaR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04627___alaR
# 2: BL02595___alaR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 503
# Identity:     400/503 (79.5%)
# Similarity:   400/503 (79.5%)
# Gaps:           4/503 ( 0.8%)
# Score: 1583.0
# 
#
#=======================================

BSNT_04627___      1 ATGAAATTGACAGAAAAAGAAACAGAAATATTAGAAATTTTAGACGAAAA     50
                     |||||..|.|||||||||||||||||||||||.|||||.|||||.|||||
BL02595___ala      1 ATGAAGCTAACAGAAAAAGAAACAGAAATATTGGAAATATTAGAGGAAAA     50

BSNT_04627___     51 CAGCCGCGCCGATTTAGAAACAATCGCAAAGATGGCGGGCA--TCCCTGT     98
                     |||||||..|||....|||||.||.||.||.||||||..||  ||.|.|.
BL02595___ala     51 CAGCCGCCTCGAACCTGAAACGATTGCTAAAATGGCGAACATTTCACAGG    100

BSNT_04627___     99 AAATGAAGTAAAAACAATTATTGACAAACTGGAGAAAGAAAAGGTTATTA    148
                     ||  |||..||||.|.||||||||.||.||.||.|||||||||||.||.|
BL02595___ala    101 AA--GAAACAAAAGCGATTATTGAAAAGCTTGAAAAAGAAAAGGTCATCA    148

BSNT_04627___    149 TCGATTATTCCGCTATGATTGATTGGCGAAAAGTAGACGGACATGAGGGC    198
                     ||||||||||.||.|||||.||.|||||||||||.|||||.|||||.|||
BL02595___ala    149 TCGATTATTCTGCAATGATCGACTGGCGAAAAGTCGACGGCCATGAAGGC    198

BSNT_04627___    199 GTTACGGCCATGATCGACGTCAAAGTAACGCCGAAGCGGGGCGTCGGTTT    248
                     ||.||.||.||||||||.||.|||||||||||||||||.||||||||.||
BL02595___ala    199 GTGACAGCGATGATCGATGTGAAAGTAACGCCGAAGCGCGGCGTCGGATT    248

BSNT_04627___    249 TGATGAAGTGGCGGAACGGATTTACCGATTCCAAGAGGTTGAATCAGTTT    298
                     |||.||||||||.||.||||||||.||.||.||.||.||||||||.||||
BL02595___ala    249 TGACGAAGTGGCCGAGCGGATTTATCGTTTTCAGGAAGTTGAATCCGTTT    298

BSNT_04627___    299 ACCTGATGTCAGGCGTATACGATTTGTCTGTCGTGATTCGCGGCAATTCG    348
                     ||.||||||||||||||||.||..|||||||.||.||.|||||||...||
BL02595___ala    299 ACTTGATGTCAGGCGTATATGACCTGTCTGTTGTCATCCGCGGCAGAACG    348

BSNT_04627___    349 ATGTCTGACGTAGCGCGTTTTGTTTCGGATAAACTCTCAACGCTTGATTC    398
                     |||||.||..|..|||.|||.||.||.||.|||.|.||.||||||||.||
BL02595___ala    349 ATGTCGGATATTTCGCATTTCGTGTCCGAAAAATTATCGACGCTTGAATC    398

BSNT_04627___    399 AGTTGTTTCTACGACAACCCATTTTATCCTGAAAAAATACAAGCATGACG    448
                     .||.||.||.||.||.|||||.|||||..|.||.||||||||||||||||
BL02595___ala    399 GGTCGTGTCGACAACCACCCACTTTATTTTAAAGAAATACAAGCATGACG    448

BSNT_04627___    449 GCAAAGTGTTTGAAACAGGAGACGACGACAAAAGAATCGTGGTGTCACCG    498
                     |.|||||.|||||..|.||.||.||.||||||||||||||||||||.||.
BL02595___ala    449 GTAAAGTTTTTGACTCCGGTGATGATGACAAAAGAATCGTGGTGTCTCCT    498

BSNT_04627___    499 TAA    501
                     |||
BL02595___ala    499 TAA    501


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