Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04673 and BL02613
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:49
# Commandline: needle
# -asequence dna-align/BSNT_04673___yueI.1.5803.seq
# -bsequence dna-align/BL02613___yueI.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04673___yueI-BL02613___yueI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04673___yueI-BL02613___yueI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04673___yueI
# 2: BL02613___yueI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 445
# Identity: 258/445 (58.0%)
# Similarity: 258/445 (58.0%)
# Gaps: 89/445 (20.0%)
# Score: 678.5
#
#
#=======================================
BSNT_04673___ 1 TTGAGTGAAGACAA--AATGGATCTCTATTTGCAGCAAGGAATGTATGGG 48
.||||.|| .||| |.||||||..|||||.|||||.||||||||.||.
BL02613___yue 1 GTGAGCGA--CCAATCATTGGATCAATATTTACAGCAGGGAATGTACGGA 48
BSNT_04673___ 49 CCTTTGGAGACAAAGCCTGACGAGCGCCATTTGTTTTTAGGCTCTTTAAG 98
||....||.||.|||||.||.||.|||....|||||||||||||..|.||
BL02613___yue 49 CCACGCGAAACGAAGCCGGATGAACGCAGACTGTTTTTAGGCTCGCTGAG 98
BSNT_04673___ 99 AGAAAGAGTCGTTTTGGCACTGACGAAAGGACAGGTGCTTAG-----AAG 143
.|||||.|||.|..|.|||.||||.||||||||.|||||..| |.|
BL02613___yue 99 GGAAAGGGTCATCATCGCATTGACTAAAGGACAAGTGCTGCGTCCGAAGG 148
BSNT_04673___ 144 CAAACCGTATAAAGAGGCGGA--GCA-CGA--------GCTGAAAAACAG 182
||.|||| ||| .|| ||| |||.||||.|.|
BL02613___yue 149 CATACCG-----------GGAAGTCATCGATGCGCTTGGCTCAAAAGCGG 187
BSNT_04673___ 183 CCAT--AACGTCACCCTTTTGGTTAATGGAGA-----GCTTCAGTATCAG 225
|| |||.| |.|||.||||.||.|| ||| |.|.|||
BL02613___yue 188 --ATGCAACAT-----TATTGCTTAACGGCGAAATCGGCT--ACTCTCA- 227
BSNT_04673___ 226 TCTTACTCTCCTTATATC-------CAAATGGCGAACCGGTACGGAGTGC 268
||..||||||||.||| |.||| || |.|.||.||.|
BL02613___yue 228 --TTTATCTCCTTACATCAAGGAGTCCAAT----AA---GCAAGGCGTCC 268
BSNT_04673___ 269 CCTTCAAGATTGTATCTGATCTTCAGTTTCATACGCCTTTAGGCCTCGTT 318
|.||...|||.||.||.||||..||.|...|.||.||..|.||.||.|||
BL02613___yue 269 CTTTTTCGATCGTGTCCGATCAGCAATCGGACACTCCCCTTGGACTTGTT 318
BSNT_04673___ 319 ATTGCGGC---TGACATCGCTGTGAATCGTGAATTGATATATATTCAGGA 365
.|.||||| |||...||..|.||| .||||.|||.|||.|||||||
BL02613___yue 319 CTCGCGGCGCGTGAGGCCGTAGAGAA---AGAATCGATTTATGTTCAGGA 365
BSNT_04673___ 366 CGACATTTATAATCGGTCAGTGCTGAAATCTTAA----------- 399
|||.||.|.|.|.|.|||.| |.||||
BL02613___yue 366 CGATATCTTTGAGCAGTCGG--------TTTTAAACAAGAGATGA 402
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