Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04692 and BL02621
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:52
# Commandline: needle
# -asequence dna-align/BSNT_04692___yukC.1.5803.seq
# -bsequence dna-align/BL02621___yukC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04692___yukC-BL02621___yukC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04692___yukC-BL02621___yukC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04692___yukC
# 2: BL02621___yukC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1443
# Identity: 918/1443 (63.6%)
# Similarity: 918/1443 (63.6%)
# Gaps: 213/1443 (14.8%)
# Score: 2580.0
#
#
#=======================================
BSNT_04692___ 1 ATGTCAGGTAAACAAAAATCATATTTAGAAAACCAATTAGAAGCTGT--T 48
|||.|||..|||.|.|||.|.|||.|.|||.||||||||||.||.|| |
BL02621___yuk 1 ATGGCAGAGAAAAAGAAAACGTATCTCGAAGACCAATTAGAGGCCGTCAT 50
BSNT_04692___ 49 GCCGAGAAAACAGATGCCGGCTATACATTTACC------TTTCAACGGGA 92
|.|| |.|||.|.||| |||||.||.| ||||||.|.||
BL02621___yuk 51 GACG-----AAAGAAGACGG---TACATATATCTTTCGTTTTCAAAGAGA 92
BSNT_04692___ 93 AAAAATAAAGCTTCTCGACGGTCTT-GAAGCTAACGTGATCAAAGATATA 141
.||.||.||.|||.|..|||| ||| |||||.|||||.||.|||||..|.
BL02621___yuk 93 GAAGATCAATCTTGTGAACGG-CTTGGAAGCAAACGTCATTAAAGAAGTC 141
BSNT_04692___ 142 AATCCATTTTTTTATAAAGAAATCGATGTGACGGATGATGAAGT---AAT 188
.||||.|..|||.||||||||..||...||||.||||||||||| |||
BL02621___yuk 142 GATCCTTCCTTTAATAAAGAAGCCGTCATGACCGATGATGAAGTCCAAAT 191
BSNT_04692___ 189 CATCACAATCCAACCTCCCTCCTCCTATAAAGCATTCCGCTTCATGAAAG 238
.|| .||.||.|||||.|||...|||||||.|||.||.|..||.||||
BL02621___yuk 192 TAT---GATTCAGCCTCCTTCCGAATATAAAGAATTTCGTTATATAAAAG 238
BSNT_04692___ 239 CTAAGGATAAAAAAAGTAAATGGCAGTTTGCCTATCAGCTTGTTCAAGCC 288
..||..||||||||||.||.||||..||.||.||.|||||.||..|||||
BL02621___yuk 239 GGAAAAATAAAAAAAGCAAGTGGCTATTCGCGTACCAGCTCGTGAAAGCC 288
BSNT_04692___ 289 GTACAGCAGCACAATC--TGTCGAGGCTGAATTTGATTGTCGCTCCTGAA 336
|| .|.||.|||.|| |....||||||.|..||||.|..||.||||||
BL02621___yuk 289 GT--TGAAGAACATTCAATTAAAAGGCTGCACCTGATCGCTGCGCCTGAA 336
BSNT_04692___ 337 AACATTGTATTCGATAAAGGGCTTACGCCTTATTTTCTCCATTATGGAGT 386
||||||||.||.||.||||||.|.||||||.|.|||.|.|||||||||||
BL02621___yuk 337 AACATTGTTTTTGACAAAGGGTTGACGCCTAAATTTTTACATTATGGAGT 386
BSNT_04692___ 387 AAAAGAAAGCATTCCTCCTTACGAGCGTGATGAGGAAAGAGTATGGCAGG 436
.||||||||||||||.||.||.||.|..||.||.||||||.|.|...|.|
BL02621___yuk 387 GAAAGAAAGCATTCCGCCATATGAACACGACGAAGAAAGACTTTTCAATG 436
BSNT_04692___ 437 AGCTGAAAGCGGCAGCGGCTTTGGCAGTTGACGGCGC--TTTTGCGTTTG 484
|..|||||||.||.|||||..|.||.||.||||| || |||| |.||||
BL02621___yuk 437 AAGTGAAAGCCGCCGCGGCGCTTGCTGTCGACGG-GCAATTTT-CTTTTG 484
BSNT_04692___ 485 AAGACTACCTGAAATTCAATGAAACGCTCACGTTCTCCGCAGAGGCAAAG 534
||||.||..|.||||.||..|||||..|||..||.||.|...|||.|||.
BL02621___yuk 485 AAGAGTATTTAAAATACAGCGAAACCATCAAATTTTCAGATCAGGTAAAA 534
BSNT_04692___ 535 GCGAT-ATTAGATACTGAATCCTATGATGATTTGCTCGAGC--TGATTCA 581
|..|| ||.|.|..|.|.| |.||.|..|||||| ..||| |.|||||
BL02621___yuk 535 GACATCATCACAAGCGGGA-CATACGGCGATTTG--AAAGCCGTCATTCA 581
BSNT_04692___ 582 AATCCATATTGATGAGCTCGAAGCCAAAGCAAAAACATAC--ATACATAT 629
||.....||.|||||.||.||.||||||| ||||.||.| .|.|||.|
BL02621___yuk 582 AAAGAGGATCGATGAACTGGATGCCAAAG--AAAAAATGCTTGTCCATCT 629
BSNT_04692___ 630 CCCGAGAAAGAAGTGGAACATCCAGCGATATATCGGCCTGGGGCTCATTG 679
.||||..|||||.|||||.||.||..|.||.||.||..|.||.||.|||
BL02621___yuk 630 TCCGAAGAAGAAATGGAAGATTCAAAGGTACATAGGGTTAGGACTAATT- 678
BSNT_04692___ 680 TTTTGCTT-GTACCGGCACTTATTTATTCGATGTACGCCTTATTTTTCGC 728
||.||||| .|||||||..||.|.|.|||..|.||..|.|||||.|||||
BL02621___yuk 679 TTATGCTTAATACCGGCTGTTTTATTTTCCTTCTATTCATTATTCTTCGC 728
BSNT_04692___ 729 GCAGCCAAAGCACCAGGCGATAGTGGACAGCAACCG-TGCGTTCTTAAAC 777
||||||.||.||.||||||.|..|.||.|||||||| |.| ||||||||.
BL02621___yuk 729 GCAGCCGAAACAGCAGGCGTTTATCGAAAGCAACCGCTAC-TTCTTAAAT 777
BSNT_04692___ 778 AAGCAGTACAGTGAAGTCATCAGCACACTGTCCAAGTACGAGGCGGA-AA 826
||.||||||||..||||||||||.||.||....||.||.||.||.|| .|
BL02621___yuk 778 AAACAGTACAGCAAAGTCATCAGTACGCTTGATAAATATGATGCCGATGA 827
BSNT_04692___ 827 GCCTGCCTGAATCGGTGCAGTATCAGCTGGCGACGTCCTATGTTGAGGTC 876
| .|||||||.||.||.||||||||||||||....||.|||.|....||.
BL02621___yuk 828 G-ATGCCTGATTCTGTTCAGTATCAGCTGGCTTATTCGTATATCATCGTT 876
BSNT_04692___ 877 GAAAACCTGGGGAGTGCAA--AAACCAAAAATATA---GAAAATAACTT- 920
||.|| .|.|.|| || ||.|| .||.|| |||.||..|.|
BL02621___yuk 877 GACAA----TGTACTG-AAGGAAGCC---GATTTACAGGAAGATGCCATG 918
BSNT_04692___ 921 ---AG--TCACCCTTCAA-TCAGACCCTCAGCATTTCTTATATTGGATT- 963
|| |.||.|||||| || ||.||..|..|||||.|.||.||||||
BL02621___yuk 919 AAGAGCCTGACGCTTCAAGTC-GATCCGAATAATTTCCTTTACTGGATTC 967
BSNT_04692___ 964 -GATTATGGTAGAGGAG--AATACAAAGAAGCG-ATCAGTATCGG-CCGT 1008
||| .||..|.||.| ||| ||||||||| .|.|| .||| ||||
BL02621___yuk 968 AGAT--CGGACGCGGCGCCAAT--AAAGAAGCGCTTGAG--ACGGCCCGT 1011
BSNT_04692___ 1009 AAGCTTGAATACAAT-----GATTATATT--TACTT-TGCCCTAGCTAAA 1050
|||||.|||.||||| |||.||.|| .|||| || |||
BL02621___yuk 1012 AAGCTGGAAAACAATGCACAGATCATGTTGGCACTTATG--------AAA 1053
BSNT_04692___ 1051 TATAAACAGCAGCTTTTATCTGAGGATACAAATGATGAAGATATACAAAA 1100
||.| |.||.||.|..||.|..||.|||
BL02621___yuk 1054 TACA---------------CAGATGACATTAAAGCCGATGAT-------- 1080
BSNT_04692___ 1101 AGAACTTGACTCAGTAAATAGTGAGC--TTGAAAAAGC----------CC 1138
||.|||.| ||||.| ||||| ..||||.||| |.
BL02621___yuk 1081 --AAATTGTC-CAGTGA----TGAGCGGCAGAAACAGCTGGATCCGCTCG 1123
BSNT_04692___ 1139 AAAAAGAACGTCAAGAAAATAAACAGTCTAATTCTGAA----ACATCGTT 1184
|||||||||.|.||||| .|||| |||.||
BL02621___yuk 1124 AAAAAGAACTTGAAGAA----------------TTGAAGCGGACAGCG-- 1155
BSNT_04692___ 1185 AGTCGATACAAGCGAAGAACAGACA--CAAACAGAC-GAAGAAAAACAAG 1231
||.|||||||.| |||| || |||| |||||.||
BL02621___yuk 1156 -------------GATGAACAGAAAGCCAAA---ACTGAAG-AAAACCAG 1188
BSNT_04692___ 1232 CAG---AA----GAG--AAAGC-GGCAGAAGAAAAAGCCGCA---GCCGA 1268
||| || ||| |||.| |||.||.|.|.|.|||||| ||.||
BL02621___yuk 1189 CAGGCAAACACCGAGCAAAACCAGGCGGACGTAGAGGCCGCAAAGGCTGA 1238
BSNT_04692___ 1269 ---GGAAAAAG-CGAAAAAAGAA-GAACAGAAGAAAAAAGAAGACGAGAA 1313
|||.||.| || |||| ||||||..|||||||||| ||
BL02621___yuk 1239 AACGGAGAAGGCCG-----AGAAGGAACAGGCGAAAAAAGAA------AA 1277
BSNT_04692___ 1314 AAAAGAAACAGAAAAGAAAGATGAGAAAAAAGATGACAAATAA 1356
.|||||||..|||.|.||| .||||||||||||||||||||
BL02621___yuk 1278 TAAAGAAAAGGAAGACAAA---AAGAAAAAAGATGACAAATAA 1317
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