Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01867 and BL02625
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:22
# Commandline: needle
# -asequence dna-align/BSNT_01867.1.5803.seq
# -bsequence dna-align/BL02625___ipi.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01867-BL02625___ipi.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01867-BL02625___ipi.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01867
# 2: BL02625___ipi
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 498
# Identity: 314/498 (63.1%)
# Similarity: 314/498 (63.1%)
# Gaps: 87/498 (17.5%)
# Score: 959.5
#
#
#=======================================
BSNT_01867 1 GTGAAACGGC---------TGCTTGTGATGCTCCTCCCCGTGCTGCTTTT 41
|..|||| ||.||||||||| |||||.||.|
BL02625___ipi 1 ---ATGCGGCTGATTTCCATGATTGTGATGC---------TGCTGTTTGT 38
BSNT_01867 42 GATAGGCTGCGGGAAAGATGAGCAGACAGAACCCGATAAGGAGGTATCAG 91
.|..||.||||||.||.|.|.|.|...||..|||||||||||||||||||
BL02625___ipi 39 CAGTGGATGCGGGCAAAACGGGGATCAAGTCCCCGATAAGGAGGTATCAG 88
BSNT_01867 92 GCGGAA-TGGAGAATCAAGAGGTTGTTTTATCTATTGACG-------CAA 133
| |||| ||||.|| |..|||..|| ..||||||| |..
BL02625___ipi 89 G-GGAAGTGGATAA-CGGGAGTGTG------ACATTGACGGTTGAACCCG 130
BSNT_01867 134 TTCAGGAGCCTGAACAAATCAAGTTTAACATGTC-GCTGAAGAACCAAAG 182
|.|||.|||..|.|.|||||.|.|||...||||| |.||.| |||||.|.
BL02625___ipi 131 TCCAGAAGCAGGGAGAAATCGAATTTCGGATGTCGGTTGTA-AACCATAC 179
BSNT_01867 183 TGAACGTGCTATTGAGTTTCAATTCAGCACAGGGCAAAAATTTGAACTTG 232
.||...|||....||||||.|||||||||..||.||.||||||||.|
BL02625___ipi 180 GGATGATGCGGCAGAGTTTGAATTCAGCAGCGGACAGAAATTTGAGC--- 226
BSNT_01867 233 TCGTGTATGATTCTGAGC-ACAAA---------GAAAGATACCGTTATTC 272
||||..|.||| ||||| |||||||||||.||.||
BL02625___ipi 227 -------TGATCGTCAGCGACAAAGAAGGGAATGAAAGATACCGCTACTC 269
BSNT_01867 273 GAAAGACAAAATGTTTACGCAGGCTTTTCAAAACCTGACGCTTGAATCTG 322
|||||..|||||||||||.||||||||.||.|...|||||| |.||||.|
BL02625___ipi 270 GAAAGGAAAAATGTTTACACAGGCTTTCCAGACGATGACGC-TCAATCCG 318
BSNT_01867 323 -GAGAAACATATGATTTCTCTGATGTGTGGAAGGAAGTCCCTGAGCCCGG 371
.|||..|.||.|||||..|||||||.|||||.||.||.|||||.|||||
BL02625___ipi 319 AAAGAGTCCTACGATTTTACTGATGTATGGAAAGAGGTGCCTGAACCCGG 368
BSNT_01867 372 AACCTATGAGGTAAAGGTGACATTTAAGGGCAGGGCGGAAAATCTCAAGC 421
.||.||.||.|||||.|||||||||..|||.||..||||| |
BL02625___ipi 369 CACATACGAAGTAAACGTGACATTTTTGGGGAGATCGGAA---------C 409
BSNT_01867 422 AGGTT-CA--------GGCTGTTCAGCA----GTTTGAAGTCAAATAA 456
||.|| || ||| |.||| |||||||||.||||||
BL02625___ipi 410 AGTTTGCAACTTTGAGGGC----CGGCAAAACGTTTGAAGTGAAATAA 453
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