Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01982 and BL02659
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:31
# Commandline: needle
# -asequence dna-align/BSNT_01982___yjcJ.1.5803.seq
# -bsequence dna-align/BL02659___yjcJ.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01982___yjcJ-BL02659___yjcJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01982___yjcJ-BL02659___yjcJ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01982___yjcJ
# 2: BL02659___yjcJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1191
# Identity: 875/1191 (73.5%)
# Similarity: 875/1191 (73.5%)
# Gaps: 33/1191 ( 2.8%)
# Score: 3095.0
#
#
#=======================================
BSNT_01982___ 1 TTGAGTAAACACAATTGGACGCTGGAAACCCAGCTCGTGCACAATCCATT 50
.|||||.|..|.||.||||||||.|||||..||||.||.||.||.|.|..
BL02659___yjc 1 ATGAGTCATGAAAACTGGACGCTTGAAACAAAGCTTGTTCATAACCAAAA 50
BSNT_01982___ 51 TAAAACAGACGGCGGAACCGGGGCGGTCAGTGTACCGATTCAGCACGCCT 100
||||||.|||||.|.||||||.||.|||||.||.|||||.||||||||.|
BL02659___yjc 51 TAAAACGGACGGAGCAACCGGAGCCGTCAGCGTGCCGATCCAGCACGCAT 100
BSNT_01982___ 101 CGACTTTTCACCAATCTTCATTTGAAGAGTTCGGGGCATATGATTACAGC 150
|.||.|||||.|||..|||.|||||..|.|||||.|.||||||.||||||
BL02659___yjc 101 CAACCTTTCATCAAGATTCTTTTGACAAATTCGGCGAATATGACTACAGC 150
BSNT_01982___ 151 CGCTCTGGCACGCCGACAAGAACAGCTCTCGAAGAAACAATTGCCGCACT 200
||.||.|||||.||||||||.|..||.||.|||||.||.||.||||..||
BL02659___yjc 151 CGGTCAGGCACACCGACAAGGAAGGCGCTTGAAGACACGATAGCCGAGCT 200
BSNT_01982___ 201 GGAAGGCGGAACAAGAGGATTTGCTTTCAGTTCA---GGCATGGCTGCCA 247
.||.||.||.||.|||||||||||||| |||| |||||||||||.|
BL02659___yjc 201 TGAGGGAGGGACGAGAGGATTTGCTTT---TTCATCCGGCATGGCTGCGA 247
BSNT_01982___ 248 TCTCAACAGCATTTTTACTGCTGTCACAGGGTGATCACGTTCTTGTGACA 297
|.||..|.||.|||.|.||..|||||.||||.||||||||.||.||.|||
BL02659___yjc 248 TTTCCTCCGCCTTTCTGCTTTTGTCAAAGGGCGATCACGTGCTCGTCACA 297
BSNT_01982___ 298 GAAGATGTATACGGCGGAACCTTCCGTATGGTGACAGAGGTGCTGACCCG 347
.|||||||.||||||||.||.|.|||.|||.|.||.||.|||||||.|||
BL02659___yjc 298 AAAGATGTGTACGGCGGCACTTACCGGATGATTACGGAAGTGCTGAGCCG 347
BSNT_01982___ 348 GTTTGGCATTGAGCATACGTTTGTCGACATGACGGATCGTAATGAAGTGG 397
.|||||.|||||.|||||.||.|||||.|||||||||...||||||.|.|
BL02659___yjc 348 CTTTGGGATTGAACATACTTTCGTCGATATGACGGATTTAAATGAAATTG 397
BSNT_01982___ 398 CGCGGAGCATCAAGCCGAATACAAAGGTCATTTATATGGAGACGCCATCA 447
|....|.|||.|||...||.|||||.|||||.|||.|.||.||.||.|||
BL02659___yjc 398 CTTTAAACATAAAGGAAAACACAAAAGTCATCTATCTTGAAACACCGTCA 447
BSNT_01982___ 448 AATCCGACACTTGGGATTACGGATATTAAAGCGATTGTTCAGCTTGCAAA 497
||||||||.||.||.|||||||||||||.||.|.|.||..|||||||.||
BL02659___yjc 448 AATCCGACGCTCGGCATTACGGATATTAGAGGGGTCGTCAAGCTTGCCAA 497
BSNT_01982___ 498 AGAAAACGGCTGTCTGACCTTTCTGGACAATACATTCATGACACCGGCAC 547
.|...|||||||||||||.||.||.|||||.||.||||||||.|||||..
BL02659___yjc 498 GGCGCACGGCTGTCTGACGTTCCTTGACAACACGTTCATGACCCCGGCGT 547
BSNT_01982___ 548 TGCAGCGTCCGCTTGACCTCGGCGTGGATATTGTACTTCACAGCGCGACA 597
|||||||.||||||||.||||||||.||||||||.||||||||||||||.
BL02659___yjc 548 TGCAGCGACCGCTTGAGCTCGGCGTCGATATTGTGCTTCACAGCGCGACG 597
BSNT_01982___ 598 AAATTCTTAAGCGGACACAGCGATGTGCTCTCAGGTTTGGCTGCTGTCAA 647
||.||.|||||||||||||||||.||..|.|||||..|.||.|..||.||
BL02659___yjc 598 AAGTTTTTAAGCGGACACAGCGACGTATTATCAGGCCTTGCCGTCGTGAA 647
BSNT_01982___ 648 AGATGAAGAGCTTGG-GAAGCAGCTGTATAAGCTGCAAAACGCGTTCGGC 696
|||..||.||||.|| |||| |.||.||||||||||||||..||||||||
BL02659___yjc 648 AGACAAAAAGCTCGGCGAAG-AACTCTATAAGCTGCAAAATTCGTTCGGC 696
BSNT_01982___ 697 GCCGTCCTTGGCGTACAGGATTGCTGGCTTGTCCTGCGCGGATTAAAAAC 746
||.||.||.|||||.||.||.|||||||||||.|||.|.||..|.||.||
BL02659___yjc 697 GCTGTTCTCGGCGTCCAAGACTGCTGGCTTGTGCTGAGAGGGCTGAAGAC 746
BSNT_01982___ 747 ATTGCAGGTCCGTTTAGAGAAGGCGAGTCA-AACAGCCCAGCGGCTTGCG 795
..|.||.||.||..|.||.||.||.|| || .||.||.||||.|||.||.
BL02659___yjc 747 GCTCCAAGTGCGGCTTGAAAAAGCAAG-CAGGACGGCTCAGCAGCTCGCC 795
BSNT_01982___ 796 GAATTTTTCCAGAAGCATCCGGCGGTGAAGCGCGTGTATTATCCGGGACT 845
|||||||||.|.||.||||||||.||.||.|..|||||||||||.||.||
BL02659___yjc 796 GAATTTTTCGAAAAACATCCGGCCGTCAAACAAGTGTATTATCCAGGGCT 845
BSNT_01982___ 846 GGCTGATCATCCCGGCGCTGAAACCCATAAAAGCCAGTC-AACGGGAGCG 894
|.||...|||||.||.||....|.|||.|||..||||.| ||| ||.||.
BL02659___yjc 846 GTCTTCGCATCCGGGTGCATCGATCCACAAACACCAGGCGAAC-GGCGCA 894
BSNT_01982___ 895 GGCGCCGTGCTATCTTTTGAGCTTGA--AAGCAAAGAGGCCGTTAAGAAG 942
||.||.||.||.||||||||.||||| |.|| .||.||.||.||..||
BL02659___yjc 895 GGTGCGGTCCTTTCTTTTGAACTTGAGGATGC--GGAAGCAGTCAAACAG 942
BSNT_01982___ 943 TTAGTCGAGAATGTGTCACTCCCAGTCTTCGCTGTCAGCCTTGGCGCCGT 992
.|.||.||.|||||.||.|||||.||||||||.|||||.|||||.||.||
BL02659___yjc 943 GTTGTGGAAAATGTCTCTCTCCCTGTCTTCGCCGTCAGTCTTGGAGCTGT 992
BSNT_01982___ 993 GGAATCGATTTTGTCCTATCCGGCAACGATGTCTCATGCGGCAATGCCTA 1042
|||.|||||..|.||.||||||||||..|||||.||.||.||.|||||.|
BL02659___yjc 993 GGAGTCGATCCTTTCTTATCCGGCAAAAATGTCGCACGCCGCCATGCCGA 1042
BSNT_01982___ 1043 AGGAAGAGCGTGAAAAACGCGGTATCACTGATGGCCTGCTCCGTCTGAGT 1092
||||.|||||...||||||.||.||.||.||.||.||.||.||..||||.
BL02659___yjc 1043 AGGAGGAGCGCACAAAACGGGGCATTACCGACGGACTTCTGCGCTTGAGC 1092
BSNT_01982___ 1093 GTCGGCGTCGAACATGCAGACGATTTAGAACACGATTTCGAACAAGCGCT 1142
|||||.||||||.||||.||.||||||.|....||.||.|..||||||.|
BL02659___yjc 1093 GTCGGGGTCGAAAATGCCGATGATTTACAGGCGGACTTTGCCCAAGCGTT 1142
BSNT_01982___ 1143 GAAAGAAATTGC----TCCAGTTGCGGTT---CGTTAA--- 1173
|.|| || ||| |..|||.|| ||||.|
BL02659___yjc 1143 GGAA------GCCGTATCC-GGAGCGCTTGCCCGTTCATAA 1176
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