Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00343 and BL02700
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:59
# Commandline: needle
# -asequence dna-align/BSNT_00343___ybbM.1.5803.seq
# -bsequence dna-align/BL02700___rsiW.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00343___ybbM-BL02700___rsiW.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00343___ybbM-BL02700___rsiW.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00343___ybbM
# 2: BL02700___rsiW
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 649
# Identity: 457/649 (70.4%)
# Similarity: 457/649 (70.4%)
# Gaps: 50/649 ( 7.7%)
# Score: 1587.5
#
#
#=======================================
BSNT_00343___ 1 ATGAGCTGTCCTGAACAAATTGTGCAGCTTATGCATATGCATCTTGATGG 50
|||||||||||.||.||.|||||.|||||||||||||...|.|||||.||
BL02700___rsi 1 ATGAGCTGTCCGGAGCATATTGTTCAGCTTATGCATAAATACCTTGACGG 50
BSNT_00343___ 51 AGATATCCTTCCAAAAGATG-AACACGTATTAAATGAACATCTGGAGACA 99
|||.||.|||||..|||||| |||.||| |||||.||.||.||..|..||
BL02700___rsi 51 AGACATACTTCCGGAAGATGAAACGCGT-TTAAAAGAGCACCTCCAATCA 99
BSNT_00343___ 100 TGCGAGAAATGCAGAAAGCATTTTTACGAGATGGAGAAATCCATAGCGCT 149
|||||....||||.||||||..||.|.||.|||||.||||||||.||.||
BL02700___rsi 100 TGCGAAGGCTGCAAAAAGCACCTTCATGAAATGGAAAAATCCATCGCTCT 149
BSNT_00343___ 150 TGTACGGAGCACATCGCATGTCGAAGCCCCCGCGGATTTTACCGCTAATG 199
|||.|.||||||.||||||.|...|||.||.|||.|.|||||.||.||||
BL02700___rsi 150 TGTCCAGAGCACGTCGCATCTTACAGCTCCGGCGAACTTTACAGCCAATG 199
BSNT_00343___ 200 TCATGGCAAAATTGCCTAAGGAGAAGAAAAG-----AGCTTCTGTAAAAA 244
|..||||.||..||||.| |||||||| .||.||..|.||.|
BL02700___rsi 200 TGCTGGCGAATCTGCCGA-----AAGAAAAGCGGACGGCATCGATCAACA 244
BSNT_00343___ 245 GATGGTTCAGAACCCATCCCGTTATCGCAGCTGCTGCGGTATT--CATCA 292
|.|||.|.|.|.|||||||..||.|.|..||.||.||..|||| || |
BL02700___rsi 245 GGTGGCTTAAAGCCCATCCGTTTTTAGTGGCGGCGGCTTTATTTGCA--A 292
BSNT_00343___ 293 TTTTGATGGGCGGGGGTTTTTTTAACAGCTGGCATAATGACCACAATTTC 342
|||||||||||||..|.|||||...|||||||.|.||.||.|||.|||||
BL02700___rsi 293 TTTTGATGGGCGGCAGCTTTTTCTCCAGCTGGAAAAACGATCACGATTTC 342
BSNT_00343___ 343 AGCGTGTCCAAGCAGCCGAATCTTGTGGTTCATAACCATACTGTGACCGT 392
|||||.||||..|||||.|||||||||||..|.|||.|.||.||.|.|||
BL02700___rsi 343 AGCGTATCCAGCCAGCCTAATCTTGTGGTGAAAAACAACACGGTCATCGT 392
BSNT_00343___ 393 GCCAGAAGGTGAGACGGTCAAAGGTGATGTCACTGTCAAAAACGGCAAGC 442
|||.|||||.||....||||||||.|||||.||.||.||||||||.||||
BL02700___rsi 393 GCCTGAAGGCGAAGTTGTCAAAGGCGATGTGACCGTGAAAAACGGAAAGC 442
BSNT_00343___ 443 TGATTATTAAAGGCAAAATAGACGGGGATGTAACCGTCGTAAACGGCGAA 492
|||||||..|.||||||.|.|||||.|||||.||..|.||||||||.|||
BL02700___rsi 443 TGATTATAGAGGGCAAAGTCGACGGCGATGTCACGATTGTAAACGGTGAA 492
BSNT_00343___ 493 AAGTATATGGCCTCTGCTGGACAAGTCACCGGTCAGATTGAAGAAATCAA 542
||.||||.|||.||.||.||||||||||||||||||||..|.||.|||||
BL02700___rsi 493 AAATATACGGCTTCAGCAGGACAAGTCACCGGTCAGATCCATGAGATCAA 542
BSNT_00343___ 543 TCAATTATTCGACTGGACATGGTACAAGATGAAGTCTGCGGGGAAAA--- 589
..|..|.||||||||||..|||||.|||||.||.|| |...||||||
BL02700___rsi 543 CGAGGTGTTCGACTGGATCTGGTATAAGATCAAATC-GACCGGAAAATCG 591
BSNT_00343___ 590 -------GTGTACTCGATGCATTCAATCCGAACGGAG----AAGAGTAA 627
|||| ||| |||| |||||||.
BL02700___rsi 592 GTTTTTGGTGT------------------GAA-GGAGTCTAAAGAGTAG 621
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