Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03889 and BL02710

See Amino acid alignment / Visit BSNT_03889 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:54
# Commandline: needle
#    -asequence dna-align/BSNT_03889___aadK.1.5803.seq
#    -bsequence dna-align/BL02710___aadK.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03889___aadK-BL02710___aadK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03889___aadK-BL02710___aadK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03889___aadK
# 2: BL02710___aadK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1018
# Identity:     535/1018 (52.6%)
# Similarity:   535/1018 (52.6%)
# Gaps:         290/1018 (28.5%)
# Score: 1176.5
# 
#
#=======================================

BSNT_03889___      1 ATGCGAAGTGAGCAGGAAATGATGGACATTTTCTTGGACTTTGCTTTGAA     50
                     |||||.|..|||||||||||.||.||      .||||    |||  ||||
BL02710___aad      1 ATGCGTACAGAGCAGGAAATCATCGA------TTTGG----TGC--TGAA     38

BSNT_03889___     51 CG----ATGAGAGAA--------TCCGATTGGTCACTTTGGAAGGGTCAC     88
                     .|    |.|.|||.|        ||.||..||||....||.|.||.||.|
BL02710___aad     39 GGTCGCACGGGAGGACAGCCGTGTCAGAGCGGTCGGCATGAACGGCTCGC     88

BSNT_03889___     89 GTACAAACAGAAATATCCCTCCTGAC-------AACTTCC--AA------    123
                     |.||.|||..|||..|||| .|.|||       |||.|||  ||      
BL02710___aad     89 GGACGAACCCAAACGTCCC-GCGGACGAACCCAAACGTCCCGAAGGACCC    137

BSNT_03889___    124 -------GATTATGACA-TCTCGTATTTTGTAACTGATGTAGAATCTTTT    165
                            ||||||||.| |.|| |||.|||||||.|||.|..|.||||||
BL02710___aad    138 TTTTCGCGATTATGATATTGTC-TATGTTGTAACAGATATGCAGTCTTTT    186

BSNT_03889___    166 AAAGAAAATGATCAG---TGGCTCGAAATCTTTGGGAAGCGCATTATGAT    212
                     ...|   ||||.|.|   |||.|.||..|.|||||..||||.||.||.||
BL02710___aad    187 CTCG---ATGAGCCGGGCTGGGTGGACGTTTTTGGAGAGCGGATCATCAT    233

BSNT_03889___    213 GCAAAAACCAGAAGATATGGAGCTTTTTCCTCCCGAAT----TAGGTAAT    258
                     |||.|..||.||||..||||||||.|||    ||||||    |.||.||.
BL02710___aad    234 GCAGACGCCGGAAGCGATGGAGCTGTTT----CCGAATGAGCTTGGCAAC    279

BSNT_03889___    259 TGGTTTTCATACATCATTCTTTTTGAGGATGGCA-ACAAATTAGATCTAA    307
                     .|.|||||.||..|.||..|.|||...||.|||| .|..||| |||.|.|
BL02710___aad    280 CGCTTTTCGTATTTGATGTTATTTACAGACGGCAGCCGCATT-GATTTGA    328

BSNT_03889___    308 CCCTTATTCCAATTCGTGAAGCAGAAGATTATTTTGCT--AATA------    349
                     ..|||.|.||..||         |||||..|    |||  ||||      
BL02710___aad    329 TTCTTGTGCCGCTT---------GAAGAAAA----GCTGGAATATAGCAG    365

BSNT_03889___    350 --ACGATGGTTTG---GTTAAGGTCTTGCTCGATAAGGAT----------    384
                       |.||.||.|||   ||   |.||.||.|.|||||||||          
BL02710___aad    366 GGAAGACGGCTTGACCGT---GATCCTGTTGGATAAGGATCAGGATCTGC    412

BSNT_03889___    385 TCGTTCATCAACTATAAAGTGACC----CCAAATGATCGCCAATACTGGA    430
                     .|| |||||             ||    ||.|..|||||..||||.|||.
BL02710___aad    413 CCG-TCATC-------------CCGCCGCCGACGGATCGGGAATATTGGG    448

BSNT_03889___    431 TGAAAAAGCCG--ACTGCAAGGGAATTTGATGATTGCTGTAATGAGTTCT    478
                     ||.||||.|||  .|.||||.|  .||.|..||.|||||.|||||.||.|
BL02710___aad    449 TGCAAAAACCGTCCCCGCAATG--CTTCGCCGACTGCTGCAATGAATTTT    496

BSNT_03889___    479 GGATGG-TTTCGACTTACGTAGTAAAAGGAC---TAGCAAGAAATGAAAT    524
                     || ||| ..|||||.||.||.|..||||| |   |.||  |..|.|||||
BL02710___aad    497 GG-TGGACATCGACATATGTGGCCAAAGG-CTTGTGGC--GGCAGGAAAT    542

BSNT_03889___    525 CCTTTTTGCCATTGACCATTTAAATGAAATTGT-ACGTCCTAAT-TTATT    572
                     .||||.|||..|.||.|||||||||   .|.|| |.|.||  || .|.||
BL02710___aad    543 TCTTTATGCACTCGATCATTTAAAT---CTCGTCAGGGCC--ATGCTGTT    587

BSNT_03889___    573 GAGAATGATGGCCTGGCATATCGCATCTCAGAAA--GGGTATTCATTTAG    620
                     ||.||||.|.|..|||.|..|||  .||..||||  ||.|.|||..|.||
BL02710___aad    588 GAAAATGCTCGAATGGAAGGTCG--GCTTTGAAACGGGCTTTTCGCTGAG    635

BSNT_03889___    621 TATGGGGAAGAACTATAAATTTATGAAGCGGTACCTT--TCAAATAAAGA    668
                     .||.||.||.||....||||||.||.|.||.||..||  |||||..|.| 
BL02710___aad    636 CATAGGCAAAAATGCAAAATTTTTGGATCGCTATGTTGATCAAAATACG-    684

BSNT_03889___    669 ATGGGAGGAA--CTCATGTCTACATATTCTG-----TGAAT------GGG    705
                      |||||  ||  ||..||...||.|| ||.|     |||.|      |||
BL02710___aad    685 -TGGGA--AAGGCTTTTGGAGACGTA-TCCGCCAGCTGATTATAAGCGGG    730

BSNT_03889___    706 TATCAGGAA-------------ATGTGGAAGTCTTTATTT----------    732
                     |||  ||||             ||||||.||   .|.|||          
BL02710___aad    731 TAT--GGAACAGTTTGTTTAAGATGTGGGAG---CTGTTTGAAGAGACAG    775

BSNT_03889___    733 -------ACTTGCT----------ATG--CATTA---TTTAGAAAGTATT    760
                            |.|||||          |||  ||.||   |||.|        
BL02710___aad    776 CAGCAGCAGTTGCTGAACATCTGAATGAACAATACCTTTTCG--------    817

BSNT_03889___    761 CAAAAGCTGTATCAGAAAGTCTTGCATATCAGTATC--------------    796
                     ||.||||.|    |||||||    ||.| |||||||              
BL02710___aad    818 CAGAAGCGG----AGAAAGT----CAGA-CAGTATCTGAGGCGCGTTCAG    858

BSNT_03889___    797 ---CTGATTAC--GATG--AAGGCA--TCACTAAGTATACGGAAGGTATT    837
                        |||| .||  ||||  ||||.|  |.|||||                
BL02710___aad    859 CAGCTGA-AACCTGATGCAAAGGAAATTGACTAA----------------    891

BSNT_03889___    838 TATTGCTCAGTAAAGTGA    855
                                       
BL02710___aad    891 ------------------    891


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