Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01249 and BL02712

See Amino acid alignment / Visit BSNT_01249 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:45
# Commandline: needle
#    -asequence dna-align/BSNT_01249___yfnB.1.5803.seq
#    -bsequence dna-align/BL02712___yfnB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01249___yfnB-BL02712___yfnB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01249___yfnB-BL02712___yfnB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01249___yfnB
# 2: BL02712___yfnB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 729
# Identity:     522/729 (71.6%)
# Similarity:   522/729 (71.6%)
# Gaps:          30/729 ( 4.1%)
# Score: 1763.5
# 
#
#=======================================

BSNT_01249___      1 ATGAAACGATACCGCACTTTATTATTTGATGTAGATGATACCATCCTTGA     50
                     .|||||...||.||.||||||||.||||||||.||||||||..|..|.||
BL02712___yfn      1 GTGAAAAATTATCGTACTTTATTTTTTGATGTGGATGATACACTATTAGA     50

BSNT_01249___     51 TTTTCAAGCGGCAGAAGCTTTAGCCCTGCGTTTGCTGTTTGAAGATCAGA    100
                     .||....|||||||||...|.|||..||||..||||.|||||.||.|||.
BL02712___yfn     51 CTTCGGTGCGGCAGAAAAGTCAGCATTGCGAATGCTTTTTGAGGAGCAGC    100

BSNT_01249___    101 ACATTCCTTTAACAAATGACAT-GAAGGCGCAGTATAAAACCAGCAATCA    149
                     |.||||.|||.|||..|||.|| ||| |||.|.||||||...|.||||||
BL02712___yfn    101 AAATTCGTTTGACAGCTGAAATAGAA-GCGAATTATAAACGAATCAATCA    149

BSNT_01249___    150 AGGTCTCTGGAGAGCCTTTGAAGAAGGTAAGAT-GACACGGGATGAAGTC    198
                     ||||.|.|||||.|..||.|||.||||..|||| ||| ||.||..||||.
BL02712___yfn    150 AGGTTTATGGAGGGTGTTCGAAAAAGGGGAGATGGAC-CGCGACCAAGTG    198

BSNT_01249___    199 GTAAACACACGTTTCTCCGCTTTGCTCAAGGAGTACGTTTACGAAGCGGA    248
                     ||.||||||||.||.|||..|||..||||.||.||.|.|...||.||.||
BL02712___yfn    199 GTGAACACACGCTTTTCCCTTTTATTCAAAGAATATGGTCTTGAGGCTGA    248

BSNT_01249___    249 CGGCGCTTTGCTTGAGCAAAAATACCGCCGCTTTCTTGAAGAAGGACATC    298
                     |||||.||||||||||.|.||.||.|||.||||.|||||||||||.||||
BL02712___yfn    249 CGGCGTTTTGCTTGAGAAGAAGTATCGCAGCTTCCTTGAAGAAGGGCATC    298

BSNT_01249___    299 AGCTTATTGACGGTGCATTTGATCTCATCTCAAATCTGCAGCAACAGTTT    348
                     ||||.||.|||||.||.|||||..|.|||..||..||||.|.|.||.|.|
BL02712___yfn    299 AGCTGATAGACGGCGCTTTTGAATTAATCAAAAGCCTGCGGGATCAATAT    348

BSNT_01249___    349 GATTTGTACATCGTGACAAACGGCGTGTCTAACACACAATATAAGCGTCT    398
                     |||||.||.||||||||.|||||.||.||.||.||.||.||||||||.||
BL02712___yfn    349 GATTTATATATCGTGACGAACGGTGTTTCAAAAACGCAGTATAAGCGCCT    398

BSNT_01249___    399 CCGTGATTCAGGATTATTTCC-ATTCTTCAAGGACATTTTCGTTTCTGAA    447
                     .|..|.|||||||||.|..|| ||..||.|||| .|||||.|||||.|||
BL02712___yfn    399 GCAAGCTTCAGGATTGTACCCGATGTTTAAAGG-GATTTTTGTTTCAGAA    447

BSNT_01249___    448 GACACAGGCTTCCAAAAGCCGATGAAGGAATATTTCGATTACGTATTTGA    497
                     |||||.||.||.||||||||||||||.|||||.||.||||||||.|||||
BL02712___yfn    448 GACACCGGTTTTCAAAAGCCGATGAAAGAATACTTTGATTACGTTTTTGA    497

BSNT_01249___    498 ACGGATTCCTCAATTTTCAGCAGAGCA----CACATTAATCATTGGGGAT    543
                     ||||||||||||.|||||.|..||.||    |    |.|||||.||||||
BL02712___yfn    498 ACGGATTCCTCATTTTTCTGTCGATCAGGGGC----TGATCATCGGGGAT    543

BSNT_01249___    544 TCACTGACTGCTGATATCAAAGGCGGACAGCTCGCCGGACTTGACACTTG    593
                     |||.||||.||.||.||..||||.||.|.|||.||||||.|.||.||.||
BL02712___yfn    544 TCATTGACAGCGGACATAGAAGGGGGGCGGCTGGCCGGATTGGATACATG    593

BSNT_01249___    594 TTGGATGAACCCTGACATGA-AGCCGAATGTGCCAGAGATCATACCAACC    642
                     .||||||||.||.|.||||| || |.||||...|.|..||..||||||||
BL02712___yfn    594 CTGGATGAATCCGGGCATGATAG-CAAATGACACTGGTATTGTACCAACC    642

BSNT_01249___    643 TATGAGATTCGTAAGCTTGAAGAGCTATATCACATTTTGAATATCGAAAA    692
                     |||.|.||.|..||.|||||.|||.|.|||.|.|||||.||.||.|||||
BL02712___yfn    643 TATCAAATACAAAAACTTGATGAGTTGTATTATATTTTAAACATTGAAAA    692

BSNT_01249___    693 TA-------CCGTCAGC------TCCTAA    708
                      |       |||.|.||      |..|||
BL02712___yfn    693 -AGAATCGGCCGCCGGCCATTGTTTATAA    720


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