Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02742 and BL02713
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:30
# Commandline: needle
# -asequence dna-align/BSNT_02742___pbpX.1.5803.seq
# -bsequence dna-align/BL02713___pbpX.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02742___pbpX-BL02713___pbpX.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02742___pbpX-BL02713___pbpX.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02742___pbpX
# 2: BL02713___pbpX
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1299
# Identity: 808/1299 (62.2%)
# Similarity: 808/1299 (62.2%)
# Gaps: 252/1299 (19.4%)
# Score: 2264.5
#
#
#=======================================
BSNT_02742___ 1 ATGACAAGCCCA-ACCCGCAGAAGAACTGCGAAACACAGACGGAGAAAAC 49
|||.||||..|| || ||||| |||||..| |||||
BL02713___pbp 1 ATGGCAAGAACATAC-------AGAAC-GCGAATAA-------AGAAA-- 33
BSNT_02742___ 50 TAAATAAAAGAGGAAAAC-----------------TGTTGCTTGGTCTTT 82
|.|.|||||..|||||| |.|| || .||||
BL02713___pbp 34 -AGAAAAAAGCAGAAAACAAAAAGAAGGCTTATCATATT--TT--CCTTT 78
BSNT_02742___ 83 TAGCAGTGATGGTT--TGCATTACGATTTGGAATGCTCTTC--ATCGGAA 128
| ||.|.||| ||.|||| ||||....|||.|||| |.|||.|
BL02713___pbp 79 T-----TGGTTGTTTGTGGATTA--ATTTATCTTGCACTTCCAAGCGGTA 121
BSNT_02742___ 129 TAGTG--------AAGAAAACGAACCATCTCAAGAAACTGCAGCGGTTTC 170
| |.| |.|||||| |.||..||||.|||||
BL02713___pbp 122 T-GCGAGATCACCAGGAAAAC---CAATTGCAAGCAACTG---------- 157
BSNT_02742___ 171 AAATACCGATCAGAAAAAAGAGG-------TCAA--AAAGAAAACTGCCA 211
|||||.||| |.|| |||||||| .||||
BL02713___pbp 158 --------------AAAAAAAGGCACAGCCTGAAGCAAAGAAAA-AGCCA 192
BSNT_02742___ 212 A---AAAATCAGAGGAACAAATCAAAACAGTGGATCGAAAT-----CAAA 253
| ||||| |.||||| |||| ||.|.|||| ||||
BL02713___pbp 193 ACACAAAAT----GAAACAA---AAAA-----GAGCAAAATCGTCACAAA 230
BSNT_02742___ 254 AAATCA------GCAAT--------TATTTAGAAGAA--ATCGGTTTCAG 287
||||.| .|||| ||||| ||| || ||.||.|||||
BL02713___pbp 231 AAATGATAATGCTCAATTGGATCAATATTT-GAA-AAGCATTGGATTCAG 278
BSNT_02742___ 288 CGGAACAGCCATGATTGTCAGAA-ATGGAGAAATCGTAACAAATAAAGGT 336
|||.|||||..||||.|| |||| |||||.||.|.||.||||..|||||.
BL02713___pbp 279 CGGCACAGCATTGATCGT-AGAAGATGGAAAAGTGGTGACAAGCAAAGGG 327
BSNT_02742___ 337 TTTGGCTATGCTGACC----GTAAA-------CACTACATTCAAAATAAT 375
|.|...|||||..||| |.||| ||.|||| |.|.|||
BL02713___pbp 328 TATTTATATGCAAACCGCGAGGAAATGGTTCCCAATACA--CCAGATA-- 373
BSNT_02742___ 376 CCATTGACATCTTTTTATGTCGGTTCATCACAAAAAGCGCTGATTGCAAC 425
||.| .||||||||.||.|||||||||||||||.|.||||||||
BL02713___pbp 374 CCGT-------CTTTTATGTGGGGTCATCACAAAAAGCGATTATTGCAAC 416
BSNT_02742___ 426 TGCTATTTTGCAGCTAGAGGAAAAGGGGAAACT-TCAGACAAGTGATCCG 474
.||.|||||.|||||.||||||||.||....|| ||.| .||.|||.||.
BL02713___pbp 417 GGCAATTTTACAGCTGGAGGAAAAAGGATTGCTATCTG-TAAATGACCCT 465
BSNT_02742___ 475 GTAAGTACGTATTTACCTCATTTTCCTAACGG-ACAAACGATTA--CTTT 521
||...||.||||.|.||..|||||||.||||| .|||| |||.| ||||
BL02713___pbp 466 GTTTCTAAGTATCTTCCCAATTTTCCAAACGGCTCAAA-GATCACCCTTT 514
BSNT_02742___ 522 GAAGAATC--TGCTT-ACACATACATCGGGGATAAACGGACATATTGAAG 568
||| |.||| ||.||.|||||.||.||.|..||.||.|..||||
BL02713___pbp 515 -----ATCATTTCTTGACGCACACATCCGGAATTAGGGGTCACAAAGAAG 559
BSNT_02742___ 569 GAGACGGCGCCATTACGCCGGACGATTTAATAAAAGACATAGAACTGCAG 618
|...|||....|||.|||||||.||||||||.|||||.||.|||...|.|
BL02713___pbp 560 GCCGCGGATATATTTCGCCGGAAGATTTAATTAAAGATATCGAAAAACGG 609
BSNT_02742___ 619 GGAATCAAACGT---CAGCCGGGCGTATGGGACTACCAG-GATTCCAACT 664
||..|.||| | ||.|.||| ..||||||.|| .|| ||.|||||.|
BL02713___pbp 610 GGTGTAAAA--TACCCAACAGGG-AAATGGGATTA-TAGAGACTCCAATT 655
BSNT_02742___ 665 ATTCTGTTCTCGCTTATATTATTGC--TGAAGTAAGCGGTGAGCCCTATG 712
|.||.|||||.||.||.|||.||.| || |||||||||||.||....|
BL02713___pbp 656 ACTCGGTTCTGGCATACATTGTTTCCATG--GTAAGCGGTGAACCAGTCG 703
BSNT_02742___ 713 AACAGTACATAAAGAATCATATTTTTAAGCCTGCGGGAATGACGCATGCA 762
|.||.|||||.||.||.|||||||||||.|||||.||.||||..||||||
BL02713___pbp 704 ACCAATACATCAAAAAGCATATTTTTAAACCTGCCGGTATGAAACATGCA 753
BSNT_02742___ 763 GGCTTTTACAAAACATATGAAAAAGAACCTTATCCTGCTGTC-GGGTATA 811
||||||||.|||||||.||..|||||..|..||||..| |.| ||.||||
BL02713___pbp 754 GGCTTTTATAAAACATTTGCTAAAGAGTCAAATCCATC-GACAGGATATA 802
BSNT_02742___ 812 AGATGAAGGGCGGCAAAACA-----GTTACACCGTATATACCTGATCTAT 856
|..|.|| .|.||||||.| ..|||.||..|.||.||.|||.|||
BL02713___pbp 803 AATTAAA--CCTGCAAAAAAAGCTTTATACGCCTGACATGCCGGATTTAT 850
BSNT_02742___ 857 CCCAGCTGTATGGAGCGGGTGATATTTATATGAGCGCTATA-GATATGTA 905
|.|||||.||.||.||.||||||||||||||||.|||| || ||.|||||
BL02713___pbp 851 CACAGCTTTACGGGGCCGGTGATATTTATATGACCGCT-TATGACATGTA 899
BSNT_02742___ 906 CAAATTTGACCAAGCGCT----GATAGACGGAAAACTGT-ATTCGCAA-A 949
....|||||..||||.|| ||.||| |||| | |||..||| .
BL02713___pbp 900 TTTGTTTGATAAAGCACTTTACGAAAGA---AAAA---TCATTTCCAATG 943
BSNT_02742___ 950 AAAG--CTATGAAAAGATGTTTACGCC--AGGGAGCAGCTCCACATACGG 995
|||| .||||||| ||||||||||| |...|||| ||||||||
BL02713___pbp 944 AAAGTTTTATGAAA--ATGTTTACGCCGAATAAAGCA-----ACATACGG 986
BSNT_02742___ 996 CATGGGATTTTATGTTGATCCCGGAAGCTATTCAAACCATGGTGTTATGC 1045
||||||.||||||||...|||.|||||||||||||.|||.|||||.||||
BL02713___pbp 987 CATGGGCTTTTATGTGTCTCCAGGAAGCTATTCAAGCCACGGTGTCATGC 1036
BSNT_02742___ 1046 CGGGCTTCAATATCTTGAACAGCTTTAGCAAATCT------GGGCAAACC 1089
|.||||.|||.||.||.|||||.||.|| ||| |.|||.|
BL02713___pbp 1037 CCGGCTACAACATATTAAACAGTTTCAG----TCTGACAGGGAGCAGA-- 1080
BSNT_02742___ 1090 ATT--GTTATTTTGTTCTCAAACATTCAAAATAATGCTAA---ATTGGGC 1134
| ||.|||.|.||.||||||||.|||||.||...||| .||.|||
BL02713___pbp 1081 --TACGTCATTCTATTTTCAAACATCCAAAACAACATTAAGTCTTTTGGC 1128
BSNT_02742___ 1135 CAAGTGAACAATAAAATATACCAGCTTC-------TAAATCAAGAATGA 1176
...|||||.|||...|| |||| |||||..|...|||
BL02713___pbp 1129 AGTGTGAATAATCGGAT-------CTTCTCTATTTTAAATGGATTTTGA 1170
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