Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00320 and BL02718

See Amino acid alignment / Visit BSNT_00320 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:59
# Commandline: needle
#    -asequence dna-align/BSNT_00320___ybbF.1.5803.seq
#    -bsequence dna-align/BL02718___ybbF.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00320___ybbF-BL02718___ybbF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00320___ybbF-BL02718___ybbF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00320___ybbF
# 2: BL02718___ybbF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1432
# Identity:     976/1432 (68.2%)
# Similarity:   976/1432 (68.2%)
# Gaps:         128/1432 ( 8.9%)
# Score: 3143.0
# 
#
#=======================================

BSNT_00320___      1 ATGAGCAAAGAAAATAACTACCATCAT------CTCGCACAGAAAATCCT     44
                     ||||||.|.||.||.||.|      ||      ||.||| |||      .
BL02718___ybb      1 ATGAGCGATGAGAAAAAAT------ATGCCGGGCTGGCA-AGA------C     37

BSNT_00320___     45 TGAGCT--------ATGCGGAGGAAAATCCAATATTTCTTC----AT-AT     81
                     |||..|        || |||.||     ||..|.|..|.||    || ||
BL02718___ybb     38 TGATTTTACAACACAT-CGGCGG-----CCCGTCTAACGTCGCAGATCAT     81

BSNT_00320___     82 ACGCATTGCATGACACGCCTGCGCATTACGCCT---TACGATGAAAGCAA    128
                     ||.||.||.|||||.|||||||||||.||||||   .||..|.|||  ||
BL02718___ybb     82 ACCCACTGTATGACGCGCCTGCGCATCACGCCTGTCAACAGTCAAA--AA    129

BSNT_00320___    129 AGC-AGAT------GCTCAGGGTTTAAGAAAGCTTGACGGCGTATTGGGG    171
                     |.| |.||      |.|||      |||  .||||||.|||||..|.||.
BL02718___ybb    130 ACCGACATCGACTCGATCA------AAG--CGCTTGAAGGCGTGATCGGC    171

BSNT_00320___    172 GTCGTTGAAGCTGAAAC-CTTACAAATTATCCTCGGCACAGGAGTCGT--    218
                     ||.|||||.|..||||| ||| ||.|||||||||||||||||.||.||  
BL02718___ybb    172 GTAGTTGAGGAGGAAACGCTT-CAGATTATCCTCGGCACAGGCGTTGTAC    220

BSNT_00320___    219 --CA---ATCA----TGTTAC----AGCTGCTTTCTCAAAGCTCGTGTCA    255
                       ||   ||||    .||| |    ||||||||    |||       ||.
BL02718___ybb    221 AGCACGTATCAGACGAGTT-CGGGAAGCTGCTT----AAA-------TCC    258

BSNT_00320___    256 GCAGAAGAAGGTGCCGATGTCAAAGAAGCTGCGGCCAAAAAGAAAGCCGA    305
                     ||||||.|.|.|   ||..|.||||||.|.||.||||||.|.|||||.||
BL02718___ybb    259 GCAGAACACGTT---GACTTAAAAGAATCCGCAGCCAAACATAAAGCGGA    305

BSNT_00320___    306 TAT---CAATCGAAAAAACGCCACTCCTTTTAAACT-TTTCTTACGTAAA    351
                     .||   |||   .||||||||.||.|||||.||.|| |||| |.||...|
BL02718___ybb    306 GATTTCCAA---GAAAAACGCGACGCCTTTCAAGCTGTTTC-TCCGGCGA    351

BSNT_00320___    352 ATTGCCAGCATTTTTATCCCTCTTATTCCCGCTCTAGTCGCTTCCGGTTT    401
                     ||.||.|||||||||||.||.||.||.||||||.|.|||||.||.||.||
BL02718___ybb    352 ATCGCAAGCATTTTTATACCGCTGATCCCCGCTTTGGTCGCCTCAGGCTT    401

BSNT_00320___    402 AATTACTGGGATTACCAAAGCAATTATTCAAGCAGGCTGGCTCTCTGCAG    451
                     .|||||.||.||.||||||||..||||.||.||.|||||||||.|.|.|.
BL02718___ybb    402 GATTACCGGAATCACCAAAGCCGTTATCCAGGCTGGCTGGCTCGCGGAAA    451

BSNT_00320___    452 ACTCACAAATTGCGGTTATCCTGACAGTCATCGGATCAGGGCTGTTCACT    501
                     .||||||||..|||.||||..|.||.||.||.||.|||||.||.||.||.
BL02718___ybb    452 CCTCACAAACCGCGATTATTTTAACGGTAATAGGCTCAGGTCTATTTACG    501

BSNT_00320___    502 TATCTCGGCATTCTCGTCGGTATTAACGCTTCGAAAGAATTTGGCGGGAC    551
                     |||.|.||.||.||.||.||.||.||..|..||||||||||.|||||..|
BL02718___ybb    502 TATTTGGGTATCCTGGTGGGGATCAATACGGCGAAAGAATTCGGCGGCTC    551

BSNT_00320___    552 ACCCGCACTTGGGGCTTTGGCCGGGATCTTGATTATCAATCCGGAGATCG    601
                     .||||||||.||.|..||.|||||.||.||.||.||.||.||      ||
BL02718___ybb    552 CCCCGCACTCGGCGGATTAGCCGGTATTTTAATCATTAACCC------CG    595

BSNT_00320___    602 C--------AAAAATCAGTTTATTTGGAGAAGAGCTTCTCCCGGGCAGGG    643
                     |        |||..|||.||  ||.||.||||.||||.|.|||||..|.|
BL02718___ybb    596 CCGTTGGTGAAATTTCACTT--TTCGGTGAAGCGCTTTTGCCGGGACGCG    643

BSNT_00320___    644 GAGGTCTGATCGGCGTCCTTTTCGCAGCCATATTCATTGCTTACACCGAA    693
                     |.|||.|.||||||.|..|.||||||||...|||.||.||||....||||
BL02718___ybb    644 GCGGTTTAATCGGCATTTTATTCGCAGCTGCATTTATCGCTTTTCTCGAA    693

BSNT_00320___    694 CAA---TTTATTCGCCGTTTTATTCCTCAATCACTCGATATCATTGTCAC    740
                     .||   .|.|..||||   ||.|.|||||.||||||||.|||||..||||
BL02718___ybb    694 AAACGGGTCAGGCGCC---TTGTACCTCACTCACTCGACATCATCATCAC    740

BSNT_00320___    741 ACCCACCGTTTCACTGTTAATCACCGGAATCGTAACGTATGTCGTATTTA    790
                     |||.||.||.||.||..|.|||||.||||||||.||.||.||.||.||.|
BL02718___ybb    741 ACCTACAGTCTCCCTTCTTATCACAGGAATCGTCACCTACGTTGTCTTCA    790

BSNT_00320___    791 TGCCTTTAGGCGGATTCATCTCTGATGCTATTACATCCGGCCTTCTGTCC    840
                     |||||.|.|||||.||.||.||.||.||.|||||.||.||.|||||..||
BL02718___ybb    791 TGCCTGTCGGCGGCTTGATTTCCGACGCCATTACGTCAGGTCTTCTCGCC    840

BSNT_00320___    841 ATCCTGGACATCGGCGGCATCGCTGCAGGCTTTATTCTGGGCGCAACCTT    890
                     |||.|.||..|.||.|||||....||.||||||.|.||||||||.|||||
BL02718___ybb    841 ATCTTAGATCTTGGGGGCATTATCGCCGGCTTTGTACTGGGCGCCACCTT    890

BSNT_00320___    891 CCTTCCTCTCGTCGTAACCGGACTGCATCAAGGCTTGACGCCTGTGCACA    940
                     ||||||.|||||||||||||||||.||||||||..||||.||.||.||.|
BL02718___ybb    891 CCTTCCGCTCGTCGTAACCGGACTTCATCAAGGACTGACACCCGTTCATA    940

BSNT_00320___    941 TGGAACTGATCAATTCAATTGGCAATGATCCTCTGCTCCCTATTTTGGCT    990
                     |||||.|.|||||||||||.|||.||||.||.|||||.||.||||||||.
BL02718___ybb    941 TGGAATTAATCAATTCAATCGGCGATGACCCGCTGCTGCCGATTTTGGCC    990

BSNT_00320___    991 ATGGGAGGTGCAGGACAGGTAGGCGCGGCCTTTGC---CGTTTTCGTGAA   1037
                     |||||.||.||||||||.||||||||.||.|||||   |..||||   ||
BL02718___ybb    991 ATGGGGGGCGCAGGACAAGTAGGCGCCGCTTTTGCGATCTATTTC---AA   1037

BSNT_00320___   1038 GACGAAAAAAACAACACTGAGGAAAGCAATCGCCGGCGGGCTTCCATCGG   1087
                     .|||||||||.|||..||.|..|.|||.||.||||||||.||.||.||.|
BL02718___ybb   1038 AACGAAAAAAGCAAAGCTAAAAAGAGCCATTGCCGGCGGACTGCCGTCAG   1087

BSNT_00320___   1088 GACTGCTCGGCATTGGTGAACCGCTTATTTTCGGAGTCACGCTGCCGCTT   1137
                     |.|||||||||||.||.||||||||.||.|||||.||.||.||.|||||.
BL02718___ybb   1088 GCCTGCTCGGCATCGGCGAACCGCTCATATTCGGTGTAACCCTTCCGCTC   1137

BSNT_00320___   1138 GGCCGTCCGTTTTTAACAGCATGTTTAGGAGCTGGAATCGGTGGTGCCTT   1187
                     ||.||||||||||||||.||.||..|.||.||.|||.|.||.||.||.||
BL02718___ybb   1138 GGACGTCCGTTTTTAACCGCGTGCCTCGGGGCCGGAGTAGGCGGAGCATT   1187

BSNT_00320___   1188 TCAAGCGTATTTTCAAGTAGCCACCATTGCGATTGGTGTCTCCGGACTGC   1237
                     ||||||||||||..||.|.||.|||.|..||||.||.||.||.||.||.|
BL02718___ybb   1188 TCAAGCGTATTTCAAAATTGCGACCGTATCGATAGGCGTATCAGGGCTCC   1237

BSNT_00320___   1238 CGCTTTCCTTTCTAG-TCCTGCCTTCGCAAATCATCCTGTATATCGTTGG   1286
                     |..|.||.|||.|.| ||.|.||..| |||.|..|..|||||||..|.||
BL02718___ybb   1238 CTTTGTCGTTTTTGGTTCATACCCAC-CAAGTTCTTTTGTATATTCTCGG   1286

BSNT_00320___   1287 GCTCTTTATTTCCTACGCGGCCGGCTTTTTATTGACCTATGCATTCGGAT   1336
                     ..|.|||||||||||.||.|||||||||.|.||.||.||..|.||.||.|
BL02718___ybb   1287 TTTGTTTATTTCCTATGCTGCCGGCTTTGTCTTAACATACTCCTTTGGTT   1336

BSNT_00320___   1337 ATAAAGATGAAATGGCTTCTCAGTTCGATTAA   1368
                     ..||.||.||.|||||...|.|.||.||||||
BL02718___ybb   1337 TCAAGGACGATATGGCAGTTGAATTTGATTAA   1368


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