Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00325 and BL02721

See Amino acid alignment / Visit BSNT_00325 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:59
# Commandline: needle
#    -asequence dna-align/BSNT_00325___ybbK.1.5803.seq
#    -bsequence dna-align/BL02721___ybbK.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00325___ybbK-BL02721___ybbK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00325___ybbK-BL02721___ybbK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00325___ybbK
# 2: BL02721___ybbK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 474
# Identity:     314/474 (66.2%)
# Similarity:   314/474 (66.2%)
# Gaps:          39/474 ( 8.2%)
# Score: 987.5
# 
#
#=======================================

BSNT_00325___      1 ATGATTCTAGTCAGTTCCTGCCTTGGAGGCATTGAATGCAGATATAACGG     50
                     |||||.||.||.|||||.||.||.|..||..|.||||||.|.||||||||
BL02721___ybb      1 ATGATACTGGTAAGTTCATGTCTGGCCGGAGTGGAATGCCGCTATAACGG     50

BSNT_00325___     51 CTCTCACGCAGC---GTCGGAGAAAATCAGAAAACTCGTCGATGAAAAGA     97
                     .||.||  ||||   ||| ||.|||||||..||.|||||.||.|||||.|
BL02721___ybb     51 TTCGCA--CAGCTATGTC-GAAAAAATCAATAAGCTCGTTGAAGAAAAAA     97

BSNT_00325___     98 AAGCAGTTATGGCTTGCCCTGAACTTCTCGGCGGCTTCTC-TACCCCACG    146
                     ||||.||.||||||||.||.||.||.||||||||.|| || .||.|||.|
BL02721___ybb     98 AAGCGGTGATGGCTTGTCCCGAGCTGCTCGGCGGATT-TCAAACACCAAG    146

BSNT_00325___    147 CGAACCCGCAGAAATCATAGGAGGCACCGGCGAGGATGTCCTCAATGGAA    196
                     .|||||.||.|||||.|||||.||.||.||.||.||.||..|..|.||.|
BL02721___ybb    147 GGAACCGGCCGAAATTATAGGCGGGACGGGAGAAGACGTTTTAGACGGCA    196

BSNT_00325___    197 CAGCGAAAATCGTGACAGCTTCAGGAGAAGACGTCACAGAACTATATATG    246
                     .||||...|||..||||...||.|||.|.|||||.|||||.||||||.|.
BL02721___ybb    197 AAGCGGTGATCAAGACACAATCGGGAAATGACGTAACAGACCTATATGTA    246

BSNT_00325___    247 GAAGGCGCCGCGA----AAACATTGGCTTACGCAAAAGAAATCAACGCTT    292
                     .||||.||    |    |||||||||.....||||...|||||||.|||.
BL02721___ybb    247 AAAGGGGC----ATATCAAACATTGGAGATGGCAAGGCAAATCAAGGCTG    292

BSNT_00325___    293 CTGCCGTCATATTAAAAGAAAACAGTCCATCTTGCGGAAGCGGTTTTATC    342
                     .|.|..||.|..|.||.||||||||.||.||||||||.|||.|...|||.
BL02721___ybb    293 ATACGATCGTGCTGAAGGAAAACAGCCCGTCTTGCGGCAGCAGCCATATA    342

BSNT_00325___    343 TATAACGGCACATTCTCTGGCAAAAAAATCACCGGCAGCGGAGTAACCGC    392
                     ||..|.||.|..|||||..||||||||||..||||||.|||..|.||.||
BL02721___ybb    343 TACGATGGAAGTTTCTCAAGCAAAAAAATAGCCGGCAACGGCCTTACGGC    392

BSNT_00325___    393 CGCACTGTTAAAACAAGCGGGCTACCGCGTCATTTCGGA---------AA    433
                     .|||||..|.|||.|||..||||.|||.||.|||||.||         |.
BL02721___ybb    393 GGCACTTCTGAAAAAAGAAGGCTTCCGTGTGATTTCCGAACATCAAATAG    442

BSNT_00325___    434 ACGAGCT-TAACGACATATTGTAA    456
                     ||||||| ||.             
BL02721___ybb    443 ACGAGCTGTAG-------------    453


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