Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

DNA alignment: BSNT_03316 and BL02729

See Amino acid alignment / Visit BSNT_03316 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:00
# Commandline: needle
#    -asequence dna-align/BSNT_03316___yppF.1.5803.seq
#    -bsequence dna-align/BL02729.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03316___yppF-BL02729.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03316___yppF-BL02729.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03316___yppF
# 2: BL02729
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 203
# Identity:     152/203 (74.9%)
# Similarity:   152/203 (74.9%)
# Gaps:          16/203 ( 7.9%)
# Score: 574.0
# 
#
#=======================================

BSNT_03316___      1 ATGAACGTATCATACTTAAGCAAACGTTTTGCAGAAATGAAGAAATATGA     50
                     ||||||||||||||||||||.||..|||||||.||.|||||..|.|||||
BL02729            1 ATGAACGTATCATACTTAAGAAATTGTTTTGCCGAGATGAAACAGTATGA     50

BSNT_03316___     51 AACAGACTGTATGAATAAACTGATGGACTTTGCCAAGTTCCTCTATATTC    100
                     .||||||||.|||||.|||||||||||.||.||.|||||..|.|||||.|
BL02729           51 GACAGACTGCATGAACAAACTGATGGATTTCGCTAAGTTTTTGTATATCC    100

BSNT_03316___    101 AAGGACATCTCAGCAT--AACTGAGTTTCGTAACAGTATGAAGGTTCTCG    148
                     |.||||||||.| |||  ||| ||.|||||.|..||||||||.|||||.|
BL02729          101 AGGGACATCTGA-CATTAAAC-GAATTTCGCACAAGTATGAAAGTTCTTG    148

BSNT_03316___    149 AAGCAAATGGAGCAGAAAGCCCGGCATATGAGATGAAT------------    186
                     ||||.|||||.|||.|...|||.||.|||||.||||||            
BL02729          149 AAGCGAATGGCGCACAGCACCCTGCTTATGATATGAATACGGACGCCAGC    198

BSNT_03316___    187 TAA    189
                     |||
BL02729          199 TAA    201


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.