Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03314 and BL02738
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:00
# Commandline: needle
# -asequence dna-align/BSNT_03314___yppG.1.5803.seq
# -bsequence dna-align/BL02738.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03314___yppG-BL02738.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03314___yppG-BL02738.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03314___yppG
# 2: BL02738
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 481
# Identity: 264/481 (54.9%)
# Similarity: 264/481 (54.9%)
# Gaps: 140/481 (29.1%)
# Score: 695.0
#
#
#=======================================
BSNT_03314___ 1 ATGAACG---GGAGCTC--TCGAAGCTATCCT-----CGGCAAATGGGCT 40
|||.|.| ||||.|| .||.| |||||| ||||
BL02738 1 ATGGAAGAGAGGAGATCCGCCGTA--TATCCTTATTCCGGC--------- 39
BSNT_03314___ 41 ATTATTATCCT----CAGCATATGCAAGGATAT------TATCAGCAGGC 80
||| | ||||||.||||..||| .|.||.|||||
BL02738 40 --------CCTGGTGC-GCATATTCAAGCCTATCAGCAAAACCATCAGGC 80
BSNT_03314___ 81 ---TGCACCCGGTT--------ATTTAG--AGCA---------------- 101
| ||.||.||| .||.|| ||.|
BL02738 81 CTAT-CATCCCGTTCAGCTGTACTTCAGCCAGGAAACCGTTCCGTACGCC 129
BSNT_03314___ 102 --------ACAACTGCC---------TCAGCAGC--ATTATGGACAGCAG 132
|||.|.||| |||||||| ||| .|||||
BL02738 130 CATCCTGCACAGCGGCCGCAGCCATATCAGCAGCCGATT-----GAGCAG 174
BSNT_03314___ 133 GATT-------ATTATCAGCCTTATGCTCCGATC--CAGCCTAT------ 167
.||| .||.||||.|| ||| ||||||.|
BL02738 175 AATTTGGACCCGTTTTCAGTCT---------ATCATCAGCCTGTTCAGCA 215
BSNT_03314___ 168 GCCTATGCAGCCGCCT------------GTATTTTCT------AACCCTT 199
||..||||||||||.| |.||||.|| .|.||.|
BL02738 216 GCAAATGCAGCCGCTTCCGCCGTTTCAGGGATTTCCTTATCAGCATCCAT 265
BSNT_03314___ 200 ATCCTATC-CCAAGGCCTAATCAACAGCAGCCTTCACAATTTCAAAGCAT 248
|.||| || ||..|||||||||..||.|||||.|||||.|||||||||.|
BL02738 266 ACCCT-TCGCCGCGGCCTAATCTCCATCAGCCGTCACAGTTTCAAAGCTT 314
BSNT_03314___ 249 TATGTCGCAGTTCAAAAAAGCCAATGGGCAATTTGATTTTAATAAAATGA 298
|.|||||||.|||||||||...||.|||||..|||||||.|..|||||||
BL02738 315 TCTGTCGCAATTCAAAAAAAAGAACGGGCAGATTGATTTCAGCAAAATGA 364
BSNT_03314___ 299 TGGATACGACAGGTCAAGTAATGAGTGCAATGAATCAGGTCGGATC-TTT 347
||||.||..||||.||..|..||||..|..|.||||||||||||.| .||
BL02738 365 TGGACACCGCAGGCCAGATGGTGAGCACGGTCAATCAGGTCGGAGCGCTT 414
BSNT_03314___ 348 AATAAAGGGATTTACCAGCTTTTTTAAATGA 378
...|||||| ||||...|.||.||.||||.|
BL02738 415 GCCAAAGGG-TTTATGGGATTCTTCAAATAA 444
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