Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03329 and BL02743

See Amino acid alignment / Visit BSNT_03329 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:01
# Commandline: needle
#    -asequence dna-align/BSNT_03329___nth.1.5803.seq
#    -bsequence dna-align/BL02743___nth.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03329___nth-BL02743___nth.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03329___nth-BL02743___nth.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03329___nth
# 2: BL02743___nth
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 667
# Identity:     516/667 (77.4%)
# Similarity:   516/667 (77.4%)
# Gaps:          11/667 ( 1.6%)
# Score: 1957.5
# 
#
#=======================================

BSNT_03329___      1 GTGTTAAATCTAAAACAAATTGAATTCTGTTTAGACAAGATAGGTGACAT     50
                     .||.|||....||||||.||.||.||.||||||||||..||.|||||.||
BL02743___nth      1 ATGCTAACAAAAAAACAGATCGAGTTTTGTTTAGACACAATCGGTGAAAT     50

BSNT_03329___     51 GTTTCCTCATGCGGAGTGTGAACTGGTTCATTCCAATCCTTTTGAATTAG    100
                     ||||||..||||.|||||.|||.|.||.|||..||||||.||||||.|.|
BL02743___nth     51 GTTTCCGGATGCAGAGTGCGAATTAGTCCATGACAATCCGTTTGAACTTG    100

BSNT_03329___    101 TGGTGGCTGTTGCTTTATCTGCGCAATGTACAGATGCACTTGTAAACAGA    150
                     |..|.|||||.||||||||.||.||.||.|||||.||.|||||.||.|.|
BL02743___nth    101 TCATCGCTGTCGCTTTATCGGCCCAGTGCACAGACGCGCTTGTCAATAAA    150

BSNT_03329___    151 GTGACCAAAACATTATTCCAAAAATATAAACGGCCGGAAGACTATTTGGC    200
                     |||||.|||||..|.|||||||||||.|||...||.|||||.|||.|.||
BL02743___nth    151 GTGACGAAAACGCTTTTCCAAAAATACAAAAAACCTGAAGATTATCTTGC    200

BSNT_03329___    201 TGTTCCGCTGGAAGAGCTTCAGCAGGATATTAAATCAATCGGTTTATATC    250
                     .||||||||.||||||||.||||||||.||.|||||.|||||.|||||.|
BL02743___nth    201 AGTTCCGCTTGAAGAGCTGCAGCAGGACATCAAATCGATCGGCTTATACC    250

BSNT_03329___    251 GTAATAAAGCGAAAAATATTCAAAAGCTGAGTAAAATGATTATTGAAGAT    300
                     |.||.|||||.||||||||||||||||||.|.||||||.|..|.|||||.
BL02743___nth    251 GCAACAAAGCTAAAAATATTCAAAAGCTGTGCAAAATGCTGCTGGAAGAC    300

BSNT_03329___    301 TACGGCGGAGAAGTGCCGAGAGACCGCGATGAGCTTGTCAAACTGCCAGG    350
                     |||||.||.||||||||||||||||||||||||||.||.|||||.||.||
BL02743___nth    301 TACGGAGGTGAAGTGCCGAGAGACCGCGATGAGCTGGTGAAACTTCCGGG    350

BSNT_03329___    351 GGTCGGGAGAAAGACCGCAAACGTAGTGGTATCCGTTGCGTTTGGCGTGC    400
                     .|||||.|||||||||||.||.||.||.||.|||||.||.||.|||||.|
BL02743___nth    351 TGTCGGAAGAAAGACCGCTAATGTCGTCGTTTCCGTGGCATTCGGCGTTC    400

BSNT_03329___    401 CGGCCATAGCCGTAGATACCCATGTGGAGAGAG--TCAGCAAACGATTGG    448
                     |.|||||.|||||.||.|||||||||||.||||  |||  |||.|..|.|
BL02743___nth    401 CTGCCATTGCCGTCGACACCCATGTGGAAAGAGTTTCA--AAAAGGCTCG    448

BSNT_03329___    449 GCATTTGCCGGTGGAAGGACTCGGTTCTGGAAGTTGAAAAGACGCTGATG    498
                     |||||||..|.||||||||.|||||..|||||||||||||||||||||||
BL02743___nth    449 GCATTTGTAGATGGAAGGATTCGGTCATGGAAGTTGAAAAGACGCTGATG    498

BSNT_03329___    499 CGCAAGGTTCCCAAAGAAGATTGGTCCGTTACGCATCACCGGCTT-ATTT    547
                     ...||.||.||..||..|||.||||||||.||.||||||| |||| ||||
BL02743___nth    499 AAAAAAGTGCCTGAATCAGAGTGGTCCGTCACTCATCACC-GCTTGATTT    547

BSNT_03329___    548 TCTTCGGCAGATATCACTGTAAAGCCCAATCTCCGCGCTGTGCGGAGTGT    597
                     |.||||||.|.|||||||||||.||.|||...|||...||.|..||.||.
BL02743___nth    548 TTTTCGGCCGCTATCACTGTAAGGCGCAAAGACCGAAATGCGAAGAATGC    597

BSNT_03329___    598 CCGCTGCTTTCTTTGTGCAGAGAAGGGCAGAAGAGGGATAAAAAAGGACT    647
                     |||.||.|||||.|||||||.||||||||.||..|..||||||||||.||
BL02743___nth    598 CCGTTGTTTTCTCTGTGCAGGGAAGGGCAAAAACGATATAAAAAAGGGCT    647

BSNT_03329___    648 GGTGAAAC----GATGA    660
                     ||||||.|    | |||
BL02743___nth    648 GGTGAAGCTGCTG-TGA    663


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