Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03337 and BL02749
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:02
# Commandline: needle
# -asequence dna-align/BSNT_03337___dinG.1.5803.seq
# -bsequence dna-align/BL02749___dinG.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03337___dinG-BL02749___dinG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03337___dinG-BL02749___dinG.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03337___dinG
# 2: BL02749___dinG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 3030
# Identity: 1933/3030 (63.8%)
# Similarity: 1933/3030 (63.8%)
# Gaps: 471/3030 (15.5%)
# Score: 5728.5
#
#
#=======================================
BSNT_03337___ 1 ATGAATAAGCAACGGTTCGTTGTTATAGATGTAGAGACAACAGGGAATTC 50
|||||.||.|||||.|..||.||.||.|||||.||.||.|||||||||||
BL02749___din 1 ATGAACAATCAACGATATGTGGTCATTGATGTGGAAACGACAGGGAATTC 50
BSNT_03337___ 51 GCCGAAGAAAGGCGATAAAATCATACAAATCGCAGCGGTTGTAATCGAAA 100
.|||||.||||||||.|.||||||.|||||.|||||||||||.||.||||
BL02749___din 51 TCCGAAAAAAGGCGACAGAATCATTCAAATTGCAGCGGTTGTGATTGAAA 100
BSNT_03337___ 101 ATGGACAAATTACTGAGCGGTTTTCAAAATACATTAATCCAAATAAATCA 150
|||||||.||.||.||.||.||.||.|||||..|.|||||.|||.|..|.
BL02749___din 101 ATGGACAGATAACCGAACGTTTCTCCAAATATGTGAATCCCAATCAGCCG 150
BSNT_03337___ 151 ATCCCTGCTTTTATTGAGCAGCTTACTGGAATCTCTAATCAAATGGTCGA 200
||.||.|||||||||||||||||.||.||.||.||.|||.|||||||.||
BL02749___din 151 ATTCCCGCTTTTATTGAGCAGCTGACGGGCATTTCGAATGAAATGGTTGA 200
BSNT_03337___ 201 GAATGAACAGCCATTTGAAGCAGTTGCTGAAGAAGTATTCCAATTGCT-- 248
.||||||.|.||||||...||..||||.|||||..|.||..|..||||
BL02749___din 201 AAATGAAGAACCATTTTCGGCGATTGCCGAAGATATTTTTGAGCTGCTTC 250
BSNT_03337___ 249 -TGACGGCGCTTATTTTGTCGCACACAATATCCATTTTGACCTTGGATTT 297
||||.|| |.||||.||||.||.||.||.||||||||.||||..|||
BL02749___din 251 ATGACAGC---TGTTTTATCGCTCATAACATTCATTTTGATCTTGCTTTT 297
BSNT_03337___ 298 GTCAAGTATGAGCTACATAAGGCGGGCTTTCAGCTCCCAGATTG--TGAA 345
||||||.|||||||.||...|||.|||||| |.| .|||||| ||.|
BL02749___din 298 GTCAAGCATGAGCTGCAGCTGGCCGGCTTT--GGT--GAGATTGAATGCA 343
BSNT_03337___ 346 --GTGCTTGATACTGTCGAGCTCTCACGTATTGTTTTTCCGGGATTTGAA 393
||.||.|||||.||.|||||.||..|.||.||.||||||||.|||||.
BL02749___din 344 GCGTTCTCGATACGGTGGAGCTTTCGAGAATCGTCTTTCCGGGTTTTGAC 393
BSNT_03337___ 394 GGGTATAAGCTGACGGAATTAAGCGAGGAGCTTCAGCTGCGGCATGATCA 443
||.|||||..||||.||..|.|||||.|||||||||.|.||.|||||..|
BL02749___din 394 GGCTATAAATTGACAGAGCTGAGCGAAGAGCTTCAGATTCGCCATGAAAA 443
BSNT_03337___ 444 GCCGCACCGGGCTGACAGCGATGCTGAAGTGACAGGGCTT--ATTTTTT- 490
.||||||.||||||||||||||||.|||||||| .|||| ||.||||
BL02749___din 444 CCCGCACAGGGCTGACAGCGATGCGGAAGTGAC--CGCTTTGATCTTTTT 491
BSNT_03337___ 491 --------TGGAAATCCTTGAAAAGCTGCGGCAGCTTCC--TTATCCGAC 530
||||.|..| ||||||| ||.||.|.|||| ||.| ||.
BL02749___din 492 ACATATGATGGACAGAC-TGAAAAG--GCTGCCGATTCCCGTTTT--GAA 536
BSNT_03337___ 531 AT-TAAAGCAGTTAAGAAGGCTTTCGCAGCATTTCATCAGTGATCTGACG 579
|| || |.|||.|.||.||...||||||.|||||.|| ..||
BL02749___din 537 ATCTA-------TCAGACGTCTATCCTGGCATTTGATCAGCGA---CGCG 576
BSNT_03337___ 580 CA-------TTTGTTGGATATGTTCATTAATGAAAACAGAC----ATACC 618
|| ||||..|| .||.|||..|||||| ||.| ||.|.
BL02749___din 577 CAGGAGCTTTTTGACGG----CTTGATTGCTGAAAA-AGGCGCCGATGCT 621
BSNT_03337___ 619 GA----GATACCGGGCTATACG-----CGCTTTTCTTCGTTTTCTG-TCA 658
|| ||..|| ||||.|||| ||.|| .||||.|| |||
BL02749___din 622 GAACTTGAGGCC-GGCTTTACGAAGGTCGGTT------CTTTTGTGATCA 664
BSNT_03337___ 659 GAGA-ACCTGAAGCTATCGATGTTCGTATAAATGAGGACG---------- 697
| || .||||||| |||| |.||.|| ||||.||
BL02749___din 665 G-GACTCCTGAAG---TCGA-----GGATGAA-GAGGCCGGCCATAAGAG 704
BSNT_03337___ 698 ---------------AGAACTTCTCATTTGAGATCGAAAGCTGGGAAGCG 732
|||.|..||||||| |
BL02749___din 705 CCGGGTTCCGCAGACAGAGCCGCTCATTT--------------------G 734
BSNT_03337___ 733 GGAAATGAAAAAGC--GCTGTCAGAGTTAATGCCTG-------GGTATGA 773
||||| ||.|..|| |||.|| ||.|| || |||.|||
BL02749___din 735 GGAAA-GAGACGGCGGGCTTTC----TTCAT---TGGACGACCGGTTTGA 776
BSNT_03337___ 774 AAAAAGAGACGGCCAAATGATGATGATGAGAGAGGTGGCTG--ATGCGTT 821
.||.|||||.||.||.|..|..||||||.|.||||| ||| ..||.||
BL02749___din 777 CAAGAGAGAAGGTCAGACAAAAATGATGCGGGAGGT--CTGGACCGCTTT 824
BSNT_03337___ 822 TGCCAATCGTGAGCATGCGCTGATTGAAGCTCCTCCAGGCATCGGAAAAA 871
|...||||.||||||||||.|.||.|||||..||.|.||.|||||||||.
BL02749___din 825 TCAAAATCATGAGCATGCGTTAATAGAAGCCGCTACTGGAATCGGAAAAT 874
BSNT_03337___ 872 CGATTGGCTATCTTATTCCGGCTGCGCTTTTTGCCAAGAAATCAAAAAAG 921
||.|.||.|||||..|.||||||||..||...||||||.||.||...||.
BL02749___din 875 CGCTCGGATATCTCGTGCCGGCTGCAATTCACGCCAAGCAAACAGGCAAA 924
BSNT_03337___ 922 CCGGTCATAATCAGCACGTATTCGAC---GCTTTTACAGCAGCAGATTCT 968
||||||.|.||||||||.|||.|||| |||| ||||||||.| |
BL02749___din 925 CCGGTCGTGATCAGCACATATACGACATTGCTT---CAGCAGCAAA---T 968
BSNT_03337___ 969 CACAAA---GGATTTGCCGATTGTCCAAGATCTGTTTCCATTTCCGGTAA 1015
.|.||| .|||.|.|||.||.|..||.|..|.||||||||||||||||
BL02749___din 969 GATAAACCGCGATATCCCGCTTTTGGAAAAGATTTTTCCATTTCCGGTAA 1018
BSNT_03337___ 1016 CAGCGGCGATTTTAAAAGGGCAATCGCATTATTTATGCCTGTAT----AA 1061
.|||.|||.|||||||.||.|..||.|||||.||||.| || ||
BL02749___din 1019 AAGCCGCGGTTTTAAAGGGCCGCTCCCATTACTTATCC----ATTCGCAA 1064
BSNT_03337___ 1062 ATTTGAGCAGGTGCTTCATGAAGAAGATGATAATTATGATGCCGTACTGA 1111
.||..||||..|..|.||.|||||.|||||.|||||||||..|||.||..
BL02749___din 1065 GTTCAAGCATATTTTACAGGAAGATGATGACAATTATGATAGCGTCCTAG 1114
BSNT_03337___ 1112 CAAAGGCACAGCTTCTCGTTTGGCTGACAGAGACAAATACAGGAGATGTA 1161
||||.||.|||.|||||||.|||||||||||.||..|.||.||.|||.||
BL02749___din 1115 CAAAAGCGCAGATTCTCGTCTGGCTGACAGACACGGAAACGGGCGATTTA 1164
BSNT_03337___ 1162 GCGGAACTGAATTTGCCTTCAGGCGGAAAATTGCTGTGGGACAGATTGGC 1211
.|.|||.|.|||.|.||.|||||||||||..|..|.|||||||||.||||
BL02749___din 1165 TCCGAAATTAATCTCCCGTCAGGCGGAAAGCTTTTATGGGACAGACTGGC 1214
BSNT_03337___ 1212 TTATGA--CG-ATGACTCCTAT---AAAAGAAGTCGCAGTGAGCA---TG 1252
.||||| || || ||.||| .||||.||...|| ||||.| ||
BL02749___din 1215 ATATGATTCGCAT---TCATATGCAGAAAGCAGCAACA-TGAGGAAATTG 1260
BSNT_03337___ 1253 TGATCGGTTTTTACGAGCGGGCCAAA---------CAGATTGCTTTGCGT 1293
| |||||||.||..|.|||||| ||||..|||
BL02749___din 1261 T-----GTTTTTATGAAAGAGCCAAAGCGAGGGCCCAGAAGGCT------ 1299
BSNT_03337___ 1294 TCCGATTTGGTGATCACCAATCATTCTCTTTTGCTGACCGATGAAGGCAG 1343
|||.||.|.||.|||||||||.|.|||.||.||||.||.|||..||.
BL02749___din 1300 ---GATATGATCATTACCAATCATGCGCTTCTGTTGACTGACGAAACCAA 1346
BSNT_03337___ 1344 CCAGAAAAAAAGGCTTCCCGAAAGCGGCACA----------TTTATTATT 1383
.|||..|| ||| |.|.||| |.| ||.||||||
BL02749___din 1347 TCAGCGAA-------TCC--ATACCGG-AGATGCCGATATGTTCATTATT 1386
BSNT_03337___ 1384 GATGAAGCACACCATTTTGAACGTGCGGCAAGCGAACATTTAGGGAAAAG 1433
||||||||.||.||||||||.||.|||||..||||.|| |.|..|
BL02749___din 1387 GATGAAGCCCATCATTTTGAGCGCGCGGCGGGCGAGCA------GTATGG 1430
BSNT_03337___ 1434 AGCTACGTACATAGAAT-------TGCATACGAAATTGAGCAGAATCGGC 1476
||||| |..||.|..|| |.||.|..|.|||||..||..|||||
BL02749___din 1431 AGCTA-GAGCAGACTATGTCTTTCTCCACAAAAGATTGATGAGGCTCGGC 1479
BSNT_03337___ 1477 ACTCTGAAGGAGCAGGG--ACTTCTAAAAAAGATGAGACAGCTATTCCAG 1524
||.||.|||.|| |||| |.||..|||||||..|| ||.|||.|.||.|
BL02749___din 1480 ACCCTCAAGCAG-AGGGGTATTTTGAAAAAAGCCGA-ACGGCTCTACCGG 1527
BSNT_03337___ 1525 -CGAAACAGCCTGCCGG---TT-----GATTCATTTTTCGAATTGGAAGA 1565
|| ||.|| || ||.||.||||||.||.||||.||
BL02749___din 1528 TCG---------GCAGGCATTTCATCAGAATCCTTTTTCCAAATGGACGA 1568
BSNT_03337___ 1566 GTGGCT---TCAGCACGTTCAAGCAGAAAGTGATGCT-TTCTTCAGCTCT 1611
.||||| ||||| |||..|.||||||.||| || |||||.|...||
BL02749___din 1569 ATGGCTCGCTCAGC---TTCTTGAAGAAAGCGAT-CTATTCTTTACGGCT 1614
BSNT_03337___ 1612 GTACATTCTTTTGTCAAACGAAGAAAACCTAAAGAA--GACTTAAACCGT 1659
||.||||||||||||||..|.||.||||| ||||| ||..||||||||
BL02749___din 1615 GTTCATTCTTTTGTCAAGAGGAGGAAACC--AAGAAACGATCTAAACCGT 1662
BSNT_03337___ 1660 CTAGTGTTTAA----GGTGAA------CAAAG-AAAGCCAGGATAAAAGC 1698
||..|.|.||| ||.||| .|||| |.|||..|| |||
BL02749___din 1663 CTCTTATATAAGATCGGCGAAACCGGTGAAAGCAGAGCATGG-----AGC 1707
BSNT_03337___ 1699 TGGTCGATCTTAACAGATGGTG--CGGAGAGGCTTTGTTCCATGC----T 1742
.|| |||.| |||.||.| ||.||| ||.|||||||||| |
BL02749___din 1708 AGG-----CTTGA-AGAAGGCGCACGAAGA--CTGTGTTCCATGCTGTAT 1749
BSNT_03337___ 1743 GACACATTTGCAGCAGCTTTTTGAGGCGCAGTCATCCCTTATGGA--AAA 1790
|||| ||||.|.|||.| ||||||| |||
BL02749___din 1750 GACA----TGCATCGGCTGT------------------TTATGGATCAAA 1777
BSNT_03337___ 1791 ACATTTGAAGGGTATGAAGAGC--------AAAACCGTCTTTTT-----A 1827
| |||.||| |||||.|.|||.|| |
BL02749___din 1778 A--------------GAAAAGCCTCGCTGAAAAACAGGCTTCTTTCACAA 1813
BSNT_03337___ 1828 GCC-----------------GATGAATACCAAAGA----AGCATGAAAG- 1855
||| ||.|||||| || .|||||||.|
BL02749___din 1814 GCCGTCAGGCGTTTTTGTTAGAGGAATAC----GATTCGTGCATGAACGA 1859
BSNT_03337___ 1856 GCTTGCAGCATTACTGTCAGACGTTGCAGAAGCTCT--TCTTTGGGTCTG 1903
.||||.|| |.||..|..|||||.| |.|..||| | |.||||...|||
BL02749___din 1860 CCTTGAAG-AATATCGAAAGACGCT-CGGCCGCT-TGATGTTTGACCCTG 1906
BSNT_03337___ 1904 ATGACGATGAAGCGGTTTGGATTGAAATAGATGCAAAGGGTGCGAAAAAT 1953
.|||.|||||.|..||.|||||||||||.||.||.|||||.||.|||||.
BL02749___din 1907 TTGAAGATGAGGTCGTCTGGATTGAAATTGACGCGAAGGGCGCAAAAAAC 1956
BSNT_03337___ 1954 GCAGTGGCCATTTACGCACAGCCTCTTGAACCTGGTGAACTTCTGGCTGA 2003
||.|..||.||||||||.|||||.|||||..|..|.|||.|||||||.||
BL02749___din 1957 GCCGCTGCTATTTACGCTCAGCCGCTTGATACAAGCGAAATTCTGGCCGA 2006
BSNT_03337___ 2004 TCAGTTTTTCGCGCG-CAAAAATAGTGTGGTGCTGACATCTGCAACCCTT 2052
.|.|||||||.| || .|||||.||.||.||.||.|||||.|..||.|||
BL02749___din 2007 CCGGTTTTTCAC-CGAGAAAAAAAGCGTTGTCCTCACATCGGGGACGCTT 2055
BSNT_03337___ 2053 ACAGTCGAAGGTTCTTTTCAATTTATGATTGAACGACTGGGACTGAGTGA 2102
...|||||....||||||.|.|.||||||..||...||.||..|.||.||
BL02749___din 2056 GTCGTCGAGAACTCTTTTGACTATATGATCAAAAAGCTTGGTTTAAGCGA 2105
BSNT_03337___ 2103 CTTTTTCCCGCGGACAATGAGAATTGAGTCACCTTTTTCTTACGATGAGC 2152
.||.|..|||.||||..||..|||.|||||.|||||||||||.|||.|.|
BL02749___din 2106 TTTCTATCCGAGGACCTTGCAAATCGAGTCGCCTTTTTCTTATGATAAAC 2155
BSNT_03337___ 2153 GTATGCAGGTAATGATTCCAAAGGAAATGAAATCA-----ATTC---AGG 2194
.||||.|..|.||||||||.|.|| ||| ||| |||| |.|
BL02749___din 2156 ATATGAATATCATGATTCCGACGG--ATG---TCAGCCCGATTCAAAACG 2200
BSNT_03337___ 2195 ATACCGGGCAACCTGAATTTATACAGGATACAGCCCGTTATATCGAACTG 2244
|| ||||| .||.|.|||.||||||....|.|||||..||.|...|
BL02749___din 2201 AT-CCGGG-----AGACTATATTCAGGATGTCTCGCGTTACGTCAAGGCG 2244
BSNT_03337___ 2245 ATGGCAAAGGAAAAACA-GCCTAAAATCCTTGTGCTGTTTACATCCCATG 2293
.|.|||||..|.|||.| ||| |||.|.||.||.||||||||.||.||||
BL02749___din 2245 CTTGCAAAACAGAAAGATGCC-AAAGTGCTCGTCCTGTTTACGTCTCATG 2293
BSNT_03337___ 2294 ATATGCTGAAAAAGGTTCACCAGGAGCTCAAGCAT---AACATGAG---- 2336
||||||||..|.|.||..|| ||..||| ||.|||||
BL02749___din 2294 ATATGCTGCGAGACGTCTAC--------CATACATTGAAAAATGAGGAAG 2335
BSNT_03337___ 2337 ----TGCTTCCGGCATTCAGCTCTTGGCACAAGGGATTACAGGCGGGAGT 2382
|.||| .|||||||.|.|||||.||||||.|.|||||.|||
BL02749___din 2336 ACTTTCCTT------GTCAGCTCCTTGCACAGGGGATTTCCGGCGGAAGT 2379
BSNT_03337___ 2383 CCCGGCAAACTGATGAAGACTTTTAAAAC--ATCCAATCAGGCGATCCTG 2430
||||..||..|.||||||...||||||.| |||| |||.|||.|.||.
BL02749___din 2380 CCCGTTAAGGTCATGAAGTTGTTTAAATCGTATCC--TCATGCGGTTCTT 2427
BSNT_03337___ 2431 CTCGGAACAAATCATTTTTGGGAAGGCGTTGATTTCCCTGGTGATGAGCT 2480
||||||||.||.|||||||||||.||||||||.||.||.|||||||||||
BL02749___din 2428 CTCGGAACGAACCATTTTTGGGAGGGCGTTGACTTTCCGGGTGATGAGCT 2477
BSNT_03337___ 2481 GACAACAGTAATGATCGTGAGGCTCCCATTCCGGTCCCCTGATCACCCGC 2530
|||.||..|.||.||||..|||||.||.|||.|..|.|||||.||.|||.
BL02749___din 2478 GACGACGCTGATCATCGCAAGGCTTCCGTTCAGACCGCCTGACCATCCGG 2527
BSNT_03337___ 2531 TTCATGCTGCAAAATGTGAGCTAGCCC--GCAA--AAAAGGAAAGAA--T 2574
||.|..|.|||||.||.|| || |||| |.||||..|||| |
BL02749___din 2528 TTGAATCAGCAAAGTGCGA------CCGGGCAAAGAGAAGGGGAGAAAGT 2571
BSNT_03337___ 2575 CCGTTTCAAACAGTGTCATTACCGGAAGCTGTGCTGACCTTCAGGCAAGG 2624
|||||||||.|.||.||..|.|||||||||||.|||.||||||||||.||
BL02749___din 2572 CCGTTTCAAGCGGTATCTCTGCCGGAAGCTGTCCTGGCCTTCAGGCAGGG 2621
BSNT_03337___ 2625 AATCGG-ACGCTTGCTGCGTTCTGCGGGAGACAAGGGAACGATTATGATA 2673
|||||| |.|| ||||.||.||.|.|..|||||..||||||.|..|.||.
BL02749___din 2622 AATCGGCAGGC-TGCTCCGCTCAGAGAAAGACAGCGGAACGGTCGTTATT 2670
BSNT_03337___ 2674 TTGGACAGACGGATTAAAACCGCTGGTTACGGC-CGGCTGTTTCTTGATG 2722
.|.|||.|.||.||...||||.||...|||||| ||| ||||| .|||.|
BL02749___din 2671 CTTGACCGCCGCATCCGAACCTCTTCCTACGGCACGG-TGTTT-ATGAAG 2718
BSNT_03337___ 2723 CCT-TGCC----GACAACCTCA-GTATCCGAAATGACTGACAGCGAGCTT 2766
.|| |||| |..||..||| |.|.|| .|||..|...||||||
BL02749___din 2719 GCTCTGCCCCCTGCAAAAGTCATGGAGCC-----TACTTTCCTTGAGCTT 2763
BSNT_03337___ 2767 GAAGCTTATGTTGCAGGGGAAAAAGAATAA 2796
|||||.||..|.||.|||.||||.|..|||
BL02749___din 2764 GAAGCCTACATAGCCGGGAAAAACGGCTAA 2793
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