Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03339 and BL02751
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:02
# Commandline: needle
# -asequence dna-align/BSNT_03339___panC.1.5803.seq
# -bsequence dna-align/BL02751___panC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03339___panC-BL02751___panC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03339___panC-BL02751___panC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03339___panC
# 2: BL02751___panC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 941
# Identity: 588/941 (62.5%)
# Similarity: 588/941 (62.5%)
# Gaps: 154/941 (16.4%)
# Score: 1698.0
#
#
#=======================================
BSNT_03339___ 1 ATGAGACAGAT---TAC------TGATATTACACAGCTGAAAGAAGCCAT 41
||||..||||| ||| .|||| ||||.|.||.||.||
BL02751___pan 1 ATGATTCAGATCTATACAGCAAAAGATA-TACAAAACTTAACGA------ 43
BSNT_03339___ 42 AAAA------CAATATCATTCAGAGGGCAAGTCAATCGGATTTGTTCCGA 85
|||| ||| .||.|||||..|.|||||.|||||.||||
BL02751___pan 44 AAAATTACCGCAA--------GGAAGGCAAAACCATCGGTTTTGTGCCGA 85
BSNT_03339___ 86 CGATGGGGTTTCTGCATGAGGGGCATTTAACCTTAGCAGACAAAGCAAGA 135
|.|||||.||.||.|||||.||.|||.|..|..|||.|||.|||||..||
BL02751___pan 86 CAATGGGCTTCCTTCATGAAGGTCATATGTCGCTAGTAGAAAAAGCGCGA 135
BSNT_03339___ 136 CAAGAAAACGACGCCGTTATT------ATGAGTATTTTTGTGAATCCTGC 179
.||||.||||| |||| |||||.||||||||.||||||..
BL02751___pan 136 AAAGACAACGA------TATTGTCGTGATGAGCATTTTTGTCAATCCTAT 179
BSNT_03339___ 180 ACAATTCGGCCCTAATGAAGATTTTGAAGCATATCCGCGCGATATTGAGC 229
.||.|||||.||....|||||.|.||||||.||||||.|.||||||||..
BL02751___pan 180 GCAGTTCGGTCCGGGAGAAGACTATGAAGCGTATCCGAGAGATATTGAAA 229
BSNT_03339___ 230 GGGA---TGCAGCTCTTGCAGAAAACGCCGGAGTCGATATTTTATTTACG 276
|.|| | ||| |||||.|....|.|.|||||.||..|.||.||.||.
BL02751___pan 230 GAGACCGT-CAG--CTTGCGGCCGGCTCAGGAGTGGACGTCTTGTTCACT 276
BSNT_03339___ 277 CCAGATGCTCATGATATGTATCCCGGTGAAAAGAATGTC--ACGATT--- 321
||.||..||.|.||.||||| |||..|..|| | |||.||
BL02751___pan 277 CCTGAGCCTGAAGAAATGTA---CGGCCAGGAG-----CCGACGGTTACC 318
BSNT_03339___ 322 -----CATGTAGAAAGACGCACAGACGTGTTATGCGGGCGCTCAAGAGAA 366
|.|| |.|||| ||.||.||.||..|.|||||.||.|||||||||
BL02751___pan 319 GCAAGCGTG-AAAAAG-CGGACGGATGTCCTTTGCGGCCGTTCAAGAGAA 366
BSNT_03339___ 367 GGACATTTTGACGGGGTCGCGATCGTACTGACGAAGCTTTTCAACCTAGT 416
||.|||||.|||||.|||||.|..||.||.||.|||||.|||||.| |
BL02751___pan 367 GGGCATTTCGACGGTGTCGCAACAGTGCTCACAAAGCTGTTCAATC---T 413
BSNT_03339___ 417 CAAG---CCGACTCGTGCCTATTTCGGTTTAAAGGATGCGCAGCAGGTAG 463
||.| |||||..|.|..||||||||..|.||||||||.||||||||.|
BL02751___pan 414 CACGTCTCCGACAAGGGTTTATTTCGGCATGAAGGATGCCCAGCAGGTTG 463
BSNT_03339___ 464 CTGTTGTTGATGGGTTAATCAGTGACTTCTTCATGGATATTGAATTGGTT 513
|.||.||.||.|||.|.||||..|||||.|||||||||||.||..||.|.
BL02751___pan 464 CCGTCGTCGACGGGCTGATCAACGACTTTTTCATGGATATCGAGCTGATC 513
BSNT_03339___ 514 CCTGTCG-----ATACGGTCAGAGAGGAAGAC-GGCTTAGCTAAAAGCTC 557
||||||| |.|||| ||.|||||| ||||| ||.||||||||
BL02751___pan 514 CCTGTCGAAACAAAACGG-----GAAGAAGACGGGCTT-GCCAAAAGCTC 557
BSNT_03339___ 558 TCGCAATGTATACTTAACAGCTGAGGAAAGAAAAGAAGCGCCTAA----G 603
..|.|||||..|..|...||||||.|||.|..|.||||| || .
BL02751___pan 558 AAGAAATGTCAATCTGCGAGCTGAAGAACGGCAGGAAGC----AACCGCT 603
BSNT_03339___ 604 CTGTATCGGGCCCTTCAAACAAGTGCG-----GAGCTGATCCAAGC--CG 646
||.||.||.||.|||| ||.||| |||||||||| || .|
BL02751___pan 604 CTTTACCGAGCTCTTC-----AGCGCGGCGCCGAGCTGATCC--GCAATG 646
BSNT_03339___ 647 GTGAAAGAGATCCTGAAGCGGTGATAAAAGCTGCAAAAGAAAT------C 690
|.||.|||||.||.||.||.|| .||||.| ||.|| |
BL02751___pan 647 GAGAGAGAGACCCGGAGGCCGT----TAAGCGG-----GAGATTCGGAGC 687
BSNT_03339___ 691 ATT---GAAACGACTAGCGGAACCATAGACTATGTAGAGCTTTATTCCTA 737
||| ||||..||.||.||....||.||.||||..||..|||||||.||
BL02751___pan 688 ATTCTGGAAAAAACGAGTGGTGTTATTGATTATGCCGATATTTATTCATA 737
BSNT_03339___ 738 TCCGGAACTCGAGCCTGTGAATGA------AATTG-CTGGAAAGATGATT 780
|||.||.||.||| ||.| .|||| |||||||..|.||.
BL02751___pan 738 TCCCGATCTGGAG-------ATCAGGGATCCATTGACTGGAAAAGTCATC 780
BSNT_03339___ 781 CTCGCTGTTGCAGTTGCTTTTTCAAAAGCGCGTTTAATAGATAATATCAT 830
.|.||.|||||.|||...|||||.|||||.||.|||||.||.||||||||
BL02751___pan 781 ATAGCGGTTGCCGTTCAGTTTTCCAAAGCCCGCTTAATTGACAATATCAT 830
BSNT_03339___ 831 TATTGATATTCGAG------AAATGGAGAGAAT----ATAA 861
..|.|||||.|..| |||.|||| ||.| |
BL02751___pan 831 CGTCGATATCCCGGCAGATCAAAAGGAG-GATTTGTGA--- 867
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