Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03341 and BL02752

See Amino acid alignment / Visit BSNT_03341 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:02
# Commandline: needle
#    -asequence dna-align/BSNT_03341___panB.1.5803.seq
#    -bsequence dna-align/BL02752___panB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03341___panB-BL02752___panB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03341___panB-BL02752___panB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03341___panB
# 2: BL02752___panB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 858
# Identity:     619/858 (72.1%)
# Similarity:   619/858 (72.1%)
# Gaps:          48/858 ( 5.6%)
# Score: 2107.5
# 
#
#=======================================

BSNT_03341___      1 ATGAAAAC-AAAACTGGATTTTCTAAAAATGA---AGGAGTCTGAAGAAC     46
                     |||||.|| |||||| ||.|||||||||||||   |.|||   |.|||.|
BL02752___pan      1 ATGAAGACAAAAACT-GACTTTCTAAAAATGAAACAAGAG---GGAGAGC     46

BSNT_03341___     47 CGATTGTCATGCTGACCGCTTATGATTATCCGGCAGCTAAACTTGCTGAA     96
                     ||||.|||||||||||.||.||.|||||||||||.||.||.|||||.|||
BL02752___pan     47 CGATCGTCATGCTGACTGCCTACGATTATCCGGCGGCAAAGCTTGCCGAA     96

BSNT_03341___     97 CAAGCGGGAGTTGACATGATTTTAGTCGGTGATTCACTCGGAATGGTCGT    146
                     ||.||.||.||.||.|||||..|.|||||.|||||||||||.|||||.||
BL02752___pan     97 CAGGCCGGCGTCGATATGATCCTTGTCGGCGATTCACTCGGCATGGTTGT    146

BSNT_03341___    147 CCTCGGCCTTGATTCAACTGTGGGTGTGACAGTTGCGGATATGATTCATC    196
                     .|||||||||||.||.||.||...|||.||.|||||.||||||||.||.|
BL02752___pan    147 ACTCGGCCTTGACTCGACCGTATCTGTTACGGTTGCTGATATGATCCACC    196

BSNT_03341___    197 ATACAAAAGCCGTTAAAAGGGGTGCGCCGA----ATACCTTTATTGTGAC    242
                     ||||||||||.||.|||.|.||.||    |    ||||.|||.|||||||
BL02752___pan    197 ATACAAAAGCTGTCAAACGCGGGGC----AAAAGATACGTTTGTTGTGAC    242

BSNT_03341___    243 AGATATGCCGTTTATGTCTTATCACCTG-TCCAAGGAAGATACGCTGAAA    291
                     .||||||||.||||||||.||||| ||| ||...||||....|.||||||
BL02752___pan    243 GGATATGCCTTTTATGTCATATCA-CTGCTCTTTGGAAAGCGCTCTGAAA    291

BSNT_03341___    292 AATGCAGCGGCTATCGTTCAGGAAAGCGGAGCTGACGCACTGAAGCTTGA    341
                     |||||.|||||.||||||||.||||||||.||.||.||..||||||||||
BL02752___pan    292 AATGCCGCGGCGATCGTTCAAGAAAGCGGGGCAGATGCTTTGAAGCTTGA    341

BSNT_03341___    342 GGGCGGAGAAGGCGTGTTTGAATCCATTCGC-GCATTGACGCTTGGAGGC    390
                     .|||||.||.||.||||||||..|.| ||.| ||.||.||.|..||.||.
BL02752___pan    342 AGGCGGCGACGGTGTGTTTGAGACGA-TCACGGCTTTAACACGCGGCGGA    390

BSNT_03341___    391 ATTCCAGTAGTCAGTCACTTAGGTTTGACACCGCAGTCAGTCGGCGTACT    440
                     ||.||.||.|||||.||.|||||.|||||.||.||.||.|||||.||..|
BL02752___pan    391 ATACCTGTTGTCAGCCATTTAGGCTTGACTCCTCAATCCGTCGGTGTTTT    440

BSNT_03341___    441 GGGCGGCTATAAAGTACAGGGCAAAGACGAACAAAGCGCCAAAAAATTAA    490
                     |||.|||||||||||.||.||.|||||.|||.||||||||...||..|.|
BL02752___pan    441 GGGAGGCTATAAAGTTCAAGGGAAAGATGAAGAAAGCGCCGGCAAGCTGA    490

BSNT_03341___    491 TAGAAGACAGTATAAAATGCGAAGAAGCAGGAGCTATGATGCTTGTGCTG    540
                     |.||||||||.|.....||.|||||||||||.||.|||..|||.||.|||
BL02752___pan    491 TTGAAGACAGCAGGCGCTGTGAAGAAGCAGGCGCGATGGCGCTCGTTCTG    540

BSNT_03341___    541 GAATGTGTACCGGCAGAACTCACAGCCAAA---ATTGCCGATACGCTAAG    587
                     |||||.||.|||||||..|||   ||..||   |||.|..|...|||.|.
BL02752___pan    541 GAATGCGTCCCGGCAGCGCTC---GCTGAACGGATTTCAAAGGAGCTCAC    587

BSNT_03341___    588 CATACCGGTCATTGGAATCGGGGCGGGTG-TGAAAGCA--GACGGACAAG    634
                     .||.||.|||||.||.||.||.||.|||| ||   |||  ||||||||.|
BL02752___pan    588 AATTCCTGTCATCGGCATTGGAGCAGGTGCTG---GCACGGACGGACAGG    634

BSNT_03341___    635 TTCTCGTTTATCATGATATTATCGGCCACGGTGTTGAG-AGAACACCTAA    683
                     ||||||||||.||.|||.||.||||.|||||.| |.|| .|.||.|||||
BL02752___pan    635 TTCTCGTTTACCACGATGTTGTCGGACACGGAG-TAAGCCGGACGCCTAA    683

BSNT_03341___    684 ATTTGTAAAGCAATATACGCGTATTGATGAAACCA-----TCGAAACAGC    728
                     ||||||.|||||.|||.|.|..||.|     ||||     |.|||..|||
BL02752___pan    684 ATTTGTCAAGCAGTATGCACAAATCG-----ACCAGCCGCTTGAACAAGC    728

BSNT_03341___    729 AATCAGCGGATATGTTCAGGATGTAAGA--CATCGTGCTTTCCCTGAACA    776
                     ..|..|.|||||||||.|||||||.|||  |..||||  ||.||||||.|
BL02752___pan    729 GCTTCGGGGATATGTTGAGGATGTCAGAAGCCGCGTG--TTTCCTGAAGA    776

BSNT_03341___    777 AAAGCATTCCTTTCAAATGAACCAGACAGTGCTGGACGGCTTGTACGGGG    826
                     ....|||||.||.|..||..|.|||..|||.||.||.||.||.|||||.|
BL02752___pan    777 TGCTCATTCGTTCCGTATAGATCAGCAAGTTCTTGAAGGATTATACGGAG    826

BSNT_03341___    827 GAAAATAA    834
                     |.|||||.
BL02752___pan    827 GGAAATAG    834


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_03341 and BL02752

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
