Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03343 and BL02753
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:02
# Commandline: needle
# -asequence dna-align/BSNT_03343___birA.1.5803.seq
# -bsequence dna-align/BL02753___birA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03343___birA-BL02753___birA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03343___birA-BL02753___birA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03343___birA
# 2: BL02753___birA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1029
# Identity: 697/1029 (67.7%)
# Similarity: 697/1029 (67.7%)
# Gaps: 96/1029 ( 9.3%)
# Score: 2279.5
#
#
#=======================================
BSNT_03343___ 1 ATGCGGTCAACATTAAGAAAAGACCTTATTGAATTATTTTCTCAGGCAGG 50
||||.|||||..||||||||..|.||.|||.||||.|||.|..||||||.
BL02753___bir 1 ATGCAGTCAAATTTAAGAAAGAAACTCATTCAATTGTTTACCGAGGCAGA 50
BSNT_03343___ 51 CAATGAATTTATTTCCGGCCAAAAAATCAGTGATGCTCTCGGCTGTTCAA 100
|...|||||.|||||.|||||.||||||||.||.|..|||||.||.||||
BL02753___bir 51 CGGCGAATTCATTTCTGGCCAGAAAATCAGCGAAGAGCTCGGATGCTCAA 100
BSNT_03343___ 101 GAACTGCTGTGTGGAAGCATATTGAAGAGCTTCGGAAAGAGGGTTATGAA 150
||||.||.||.|||||||||||.|||||.||..|.|||..|||.||||||
BL02753___bir 101 GAACCGCCGTTTGGAAGCATATCGAAGATCTGAGAAAATCGGGATATGAA 150
BSNT_03343___ 151 GTAGAAGCCGTTAGAAGAAAAGGATATCGGC-------TCATCAAAAAAC 193
.|.|||||.||..||| |..||||| |.||.|||||||
BL02753___bir 151 CTTGAAGCGGTCCGAA-------AGCTCGGCTATAAAATGATAAAAAAAC 193
BSNT_03343___ 194 CCGGAAAACTCAGTGAAAGCGAAATTCGTTTTGGATTAAAAACGGAAGTG 243
|||..||..|||.||||...|||||..|..|.||.|||||||||.||...
BL02753___bir 194 CCGACAAGATCACTGAAGATGAAATCAGGCTCGGGTTAAAAACGAAAAAA 243
BSNT_03343___ 244 ATGGGCCAG------CATCTTATTTACCATGACGTTCTTTCAAGCACGCA 287
|||||.||| |||.|| ||.||.||..|||||...||.||
BL02753___bir 244 ATGGGACAGACGATCCATTTT------CAGGATGTCGTTTCATCAACTCA 287
BSNT_03343___ 288 AAAAACGGCTCATGAGCTCGCGAATAATAACTCACCGGAAGGCACCCTCG 337
|||||..||.||.||.||.||.||.||.....|.||.|||||.||..||.
BL02753___bir 288 AAAAATCGCCCACGAACTTGCAAACAACGGTGCGCCCGAAGGAACGATCA 337
BSNT_03343___ 338 TGGTGGCTGACAAACAAACAGCCGGAAGGGGCCGAATGTCTAGGGTATGG 387
|.||.||.|||||.||.||.|..|||||.||..|||||.|.||.|.||||
BL02753___bir 338 TCGTTGCCGACAAGCAGACTGAAGGAAGAGGAAGAATGGCGAGAGCATGG 387
BSNT_03343___ 388 CATTCTCAAGAAGGAAACGGCGTTTGGATGAGCCTGATTTTGCGGCCTGA 437
|||||.|..||||||||||||.|||||||||||.|.|||||..|||||||
BL02753___bir 388 CATTCCCCGGAAGGAAACGGCATTTGGATGAGCATCATTTTAAGGCCTGA 437
BSNT_03343___ 438 CATTCCGCTCCAAAAAACACCGCAGCTGACTCTGCTTGCTGCAGTAGCTG 487
.|||||..|.||||||||.|||||||||||.||..|.||.||.|||||..
BL02753___bir 438 AATTCCCGTGCAAAAAACGCCGCAGCTGACGCTTTTAGCCGCTGTAGCGA 487
BSNT_03343___ 488 TTGTGCAGGGAATAGAAGAGGCAGCAGGCATCCAAACGGATATTAAATGG 537
|.||.||||.|||.||||||..|.|.||||||..|.|.||.|||||||||
BL02753___bir 488 TCGTTCAGGCAATCGAAGAGCAAACCGGCATCGCAGCCGAAATTAAATGG 537
BSNT_03343___ 538 CCAAATGATATTTTGATTAACGGAAAAAAAACAGTCGGCATCCTAACGGA 587
||.||.|||||||||||.|||||.||||||...|||||.|||.|||||||
BL02753___bir 538 CCGAACGATATTTTGATCAACGGCAAAAAAGTGGTCGGGATCTTAACGGA 587
BSNT_03343___ 588 AATGCAGGCTGAAGAAGACCGCGTACGTTCAGTGATCATTGGGATCGGCA 637
|.|||||||.||||..||.|..||.|.|||.||.||..|.||.|..||.|
BL02753___bir 588 ACTGCAGGCGGAAGCTGATCAGGTCCATTCCGTTATTGTCGGAACGGGGA 637
BSNT_03343___ 638 TTAACGTTAACCA----GCAGCCTAATGATTTTCCAGATGAATT----GA 679
|.|||||.||.|| |||||| ||.|||||.||.||||| ||
BL02753___bir 638 TCAACGTCAATCAGCTTGCAGCC----GACTTTCCGGAGGAATTACAAGA 683
BSNT_03343___ 680 AGGACATCGCGACAAGCC----TCAGCCAAGCTGCTGGGGAAAAAATTGA 725
| ||| |||||||||| ||...||||| ||.||||||||.||
BL02753___bir 684 A--ACA--GCGACAAGCCTTCGTCTCGCAAGC----GGTGAAAAAATCGA 725
BSNT_03343___ 726 TCGGGCCGGCGT-----CATCCAGCATATTTTACTATGCTTTGAGAAACG 770
|.|..||||.| ||..|| |||.|.| |.|.| |||||.|||.|
BL02753___bir 726 -CAGAGCGGCTTTGGTCCAAACA--ATAATGT-CGACG-TTTGAAAAAAG 770
BSNT_03343___ 771 GTACCGGGATTATATGACGC--ACGGATTTACGCCGATTAAGCTTTTATG 818
|||....||.|||.| ||| ||||.|||...|||||.||||||||.||
BL02753___bir 771 GTATGAAGACTATCT--CGCCTACGGTTTTGAACCGATCAAGCTTTTGTG 818
BSNT_03343___ 819 GGAAAGCTATGCGCTCGGTATTGGCACT--------AATATGAGAGCCAG 860
|||||||||||| .|||.|.|| ||| |||..|||.|
BL02753___bir 819 GGAAAGCTATGC-------TTTGACCCTGAACCGCGAAT-TGACGGCCCG 860
BSNT_03343___ 861 AACGTTAAACGGAACCTTTTACGGGAAGGCGTTAGGTATAGATGATGAAG 910
.|||.|.||||||||.|||.||||.||.|||.|.||.||.||.||.||||
BL02753___bir 861 GACGCTGAACGGAACGTTTCACGGCAAAGCGCTCGGAATCGACGAAGAAG 910
BSNT_03343___ 911 GCGTTCTGCTTTTAGAAACGAACGAAGGCATTAAAAAAATCTATTCTGCC 960
||||..||.|..|.|||||||..||.|||||.||||||||.||.||.||.
BL02753___bir 911 GCGTATTGATCCTGGAAACGAGTGACGGCATCAAAAAAATATACTCCGCT 960
BSNT_03343___ 961 GATATCGA-ATTGGGCTAA---------- 978
|||||||| || |||
BL02753___bir 961 GATATCGATAT-----TAATCCGTCATAG 984
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