Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03344 and BL02754
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:03
# Commandline: needle
# -asequence dna-align/BSNT_03344___cca.1.5803.seq
# -bsequence dna-align/BL02754___cca.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03344___cca-BL02754___cca.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03344___cca-BL02754___cca.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03344___cca
# 2: BL02754___cca
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1311
# Identity: 798/1311 (60.9%)
# Similarity: 798/1311 (60.9%)
# Gaps: 234/1311 (17.8%)
# Score: 2168.0
#
#
#=======================================
BSNT_03344___ 1 ATGGAAAAAGTTTTTATCAAAGCACTTCCCGTGCTCCG-CATCTTAATCG 49
|||||..|..|.|||.|.||.||.|||||..|.||.|| .|.||.|| .
BL02754___cca 1 ATGGAGGATCTCTTTTTGAAGGCTCTTCCTCTCCTTCGTGAGCTGAA--A 48
BSNT_03344___ 50 AAGCA-GGCCATCAGGCTTATTTTGTCGGAGGCGCAGTTCGTGACAGCTA 98
||.|| |||...|||||.||.|||||.||.||.||.||..|.||...|.|
BL02754___cca 49 AAACACGGCTGGCAGGCCTACTTTGTAGGCGGAGCCGTCAGGGATGCCCA 98
BSNT_03344___ 99 TATGAAACGAACGA--TCGGAGATGTCGATATCGCGACAGATGCGGCACC 146
.|||||..|| || ||||.|||.|.||||||||.||||||||..|.||
BL02754___cca 99 AATGAACAGA--GATGTCGGCGATATTGATATCGCTACAGATGCATCCCC 146
BSNT_03344___ 147 TGATCAAGTAGAACGGC--TGTTTCAGCGGACTGTTGATGTAGGCAAAGA 194
.||..||.|.||| || |.||||.|...||.||||||||.||.||.||
BL02754___cca 147 GGAAGAAATCGAA--GCCATTTTTCCGAAAACCGTTGATGTCGGAAAGGA 194
BSNT_03344___ 195 GCACGGGACCATTATTGTGCTCTGGGAGGATGAAACCTATGAAGTCACGA 244
.|||||.|||||.||.||.||||..||||..|||.||||.||.||.||||
BL02754___cca 195 ACACGGAACCATCATCGTCCTCTTTGAGGGAGAATCCTACGAGGTGACGA 244
BSNT_03344___ 245 CATTCCGGACTGAATCTGATTATGTTGATTTCAGAAGACCGTCAGAAGTG 294
|.||.||..|.||...|||.||||..||||.||||||.|||...|..||.
BL02754___cca 245 CCTTTCGCGCAGAGCTTGAATATGAGGATTACAGAAGGCCGAGCGGCGTT 294
BSNT_03344___ 295 CAATTTATCTCATCATTAGAA-GAGGATCT-AAAACGCAGAGATTTAACG 342
||.||||||..|||..| ||| ||.||.|| ||.|.|| |.|||.|.|||
BL02754___cca 295 CAGTTTATCAAATCGCT-GAAGGAAGACCTGAAGAGGC-GGGATCTGACG 342
BSNT_03344___ 343 ATCAATGCGATGGCCATGACAGCGGACG-GGAAGG-----TGCTTGATTA 386
||.|||||||||||.|| |||.| .||||| ||.|.||.||
BL02754___cca 343 ATTAATGCGATGGCGAT------GGATGAAGAAGGCAGACTGATCGACTA 386
BSNT_03344___ 387 TTTTGGCGG-------------CAAGAAAGATATTGATCAGAAAGTGATT 423
|||.||||| |..||||||| |||||
BL02754___cca 387 TTTCGGCGGGCTCCGCGACATACGGGAAAGAT-------------TGATT 423
BSNT_03344___ 424 CGAACCGTTGGAAAGCCTGAGGATAGATTTCAAGAGGATGCGCTTCGTAT 473
|.|||.||.||..|.||.|.|||..|.|||||.||.|||||||||||.||
BL02754___cca 424 CAAACGGTCGGCGACCCGGCGGAGCGTTTTCACGAAGATGCGCTTCGCAT 473
BSNT_03344___ 474 GCTGAGAGCCGTACGCTTTATGAGCCAGCTTGGCTTTACGCTTTCACCGG 523
||||.|.||..|.||.||||||||.|||||.|..|||..||||||.||..
BL02754___cca 474 GCTGCGGGCGCTCCGTTTTATGAGTCAGCTCGAGTTTGAGCTTTCTCCAA 523
BSNT_03344___ 524 AAACAGAAGAAGCCA-TTGCGAAAGAAAAA----TCACTCCTCTCCCATG 568
|.|||.||.||||.| ||||| |||| .|.|||||..|||||.
BL02754___cca 524 ATACAAAAAAAGCGATTTGCG-----AAAACCGTCCGCTCCTGGCCCATA 568
BSNT_03344___ 569 TTTCAGTCGAACGAAAAACTATAGAGTTCGAGAAATTGCTGCAGGGAAGA 618
||||....||.||.|||||..|.||.|||||.|||.|..|..|.||||.|
BL02754___cca 569 TTTCTACAGAGCGGAAAACGGTTGAATTCGAAAAACTTTTAAAAGGAAAA 618
BSNT_03344___ 619 GCTTCTCGCCAGGCGCTTCAAACA----CTCATTCAAAC-GAGATTGTAT 663
||..|..|||.|||.||..||.|| | |.|||| |.|.|| ||.
BL02754___cca 619 GCAGCAGGCCGGGCTCTGGAAGCAGCGGC----TGAAACAGGGCTT-TAC 663
BSNT_03344___ 664 GAAGAGCTTCCTGGTTTTTA--TCATAAACGAGAAAACCTGATTTCAACG 711
.|.||||||||.||..|..| .||.|||.||| ||
BL02754___cca 664 AAGGAGCTTCCGGGGCTGGACGGCAAAAAGGAG---------------CG 698
BSNT_03344___ 712 AGT-----------GAG--TTTCCATTCTTCTCTTTAACATC----CCGT 744
.|| ||| ||||| ||.||.|| |||.|| ..||
BL02754___cca 699 CGTTCTGGCTGCCCGAGCTTTTCC-TTTTTATC---AACTTCAAAAAAGT 744
BSNT_03344___ 745 GAGGAGCTTTGGGCTGCTCTTTTAATTAACCTTGGCATAGTCTTGA---- 790
|..||..|.|||||.|| |||.|||.| |||..|.|.||
BL02754___cca 745 GCCGATATATGGGCGGC---TTTCATTCA------CATGATATCGATCAA 785
BSNT_03344___ 791 --------AAGACGCGCCGCTTTTCCTGAAAGGTTGGAAGCTCCCGGGAA 832
||| |||.|||.|||| |.|||||.||||||||.|||||.|
BL02754___cca 786 TCCCGCTGAAG-CGCACCGGTTTT--TAAAAGGGTGGAAGCTTCCGGGGA 832
BSNT_03344___ 833 AAGTGATCAAGGA-AGCCATTCACAT-----TG--CCGATACGTT----- 869
||||.|||| || ||.|..|| ||| || |.||| ||.|
BL02754___cca 833 AAGTCATCA--GACAGGCGCTC-CATACGGCTGAACGGAT-CGATCAAAA 878
BSNT_03344___ 870 -TGGCCAGA----GTCTTGACGTAATGACAATGTACAGAGCTGGGGAAAA 914
||| || ||||.||.|| |||| .||.||||||.|
BL02754___cca 879 ATGG---GATGCCGTCTCGATGT-ATGA----------GGCGGGGGAAGA 914
BSNT_03344___ 915 AGCACTGCT---CTCAGCGGCCAAAATATCGCAGCTT-----------CG 950
..|.||||| |.||.|.|||| .||||||||| .|
BL02754___cca 915 GACGCTGCTGGCCGCATCTGCCA----TTCGCAGCTTGAGGGACAAGCAG 960
BSNT_03344___ 951 GCAAAACGAAAAACTGGATGAAAAGAAACTG-----AA--GGACATTCAG 993
|||| |.||||||.||.|.||| || .||||.|| |
BL02754___cca 961 GCAA----------TCGATGAAGAGCAGCTGGCTGAAATCAGACAGTC-G 999
BSNT_03344___ 994 TA-----CGCTTATCAAAACCTGCCGATCAAAAGCCTTAAGGATCT--TG 1036
|| ||||| |||||.||||||||.||.||.|| .|
BL02754___cca 1000 TACCAGGCGCTT-----------CCGATTAAAAGCCTGAAAGACCTGGCG 1038
BSNT_03344___ 1037 ATATCACGGGTAAG-GACTTGCTTGCGCTTC-GAAACCGGCCGGCCGGAA 1084
.|||| .|.||| ||..||| ||...||| ||||...|||||||||||
BL02754___cca 1039 GTATC---TGGAAGCGATCTGC-TGAATTTCAGAAAGAAGCCGGCCGGAA 1084
BSNT_03344___ 1085 AATGGGTGTCGGAAGAATTACAGCGGATCGAGCAGGCTGTTGTGACA-GG 1133
||||||||||.||.||.||..|.|||||.||||.|||.| |||.|.| ||
BL02754___cca 1085 AATGGGTGTCCGATGATTTGAAACGGATTGAGCGGGCCG-TGTTAAACGG 1133
BSNT_03344___ 1134 GAAGCTCTCCAATCAAAAGAAACACATAGAGGAGTGGCTGAAGACATGCG 1183
|.||||..||||||||||.|||..||||||||||||||||.|..|||||.
BL02754___cca 1134 GGAGCTTGCCAATCAAAAAAAAGCCATAGAGGAGTGGCTGGATTCATGCA 1183
BSNT_03344___ 1184 GTCAACATTAA 1194
|||||..||||
BL02754___cca 1184 GTCAAATTTAA 1194
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