Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03375 and BL02777
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:17
# Commandline: needle
# -asequence dna-align/BSNT_03375___aroB.1.5803.seq
# -bsequence dna-align/BL02777___aroB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03375___aroB-BL02777___aroB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03375___aroB-BL02777___aroB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03375___aroB
# 2: BL02777___aroB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1154
# Identity: 774/1154 (67.1%)
# Similarity: 774/1154 (67.1%)
# Gaps: 130/1154 (11.3%)
# Score: 2396.5
#
#
#=======================================
BSNT_03375___ 1 ATGAAGACACTGCATGTTCAAACTGCTTCCTCGTCATATCCTGTTTTTAT 50
|||||..||||.||..|..||||.|||||.|.|||.||.||.||.||.||
BL02777___aro 1 ATGAAATCACTTCAAATCGAAACCGCTTCTTTGTCCTACCCGGTATTCAT 50
BSNT_03375___ 51 CGGACAAGGTATCAGAAAAAAGGCTTGC-GAACTATTAACCTCTTTAAAC 99
|||...|||.||.||||||||.|| .|| ||.||.||..|.||.||.||
BL02777___aro 51 CGGGGGAGGCATTAGAAAAAACGC-GGCAGAGCTTTTGTCATCCTTGAA- 98
BSNT_03375___ 100 AGGCCTT----TAACAAGGATTATGCTT---GTCACGGATGAAGAAGTGG 142
|||| |.|| ||...||||| .||||.||.||||||||.|
BL02777___aro 99 ---CCTTCCGATGAC---GAAACTGCTTTTGATCACCGACGAAGAAGTTG 142
BSNT_03375___ 143 ---ACCGCCTGTATGGTGATGAAATG---------CTCCATTTGCTGCAA 180
|.||| |||||.||.||..|| |||| ||.||
BL02777___aro 143 ATAAACGC---TATGGAGAAGAGCTGTTCAGTCTTCTCC----GCAGC-- 183
BSNT_03375___ 181 GATAAATGGCCTGTGAAAAAAGTGACGGTACCGAGTGGAGAGCAGGCAAA 230
||||||||.||.|||||.||..||||.||.||.||.||||||||.||
BL02777___aro 184 ---AAATGGCCCGTCAAAAAGGTTGCGGTGCCAAGCGGCGAGCAGGCCAA 230
BSNT_03375___ 231 ATCCATGGACATGTACACAAAATTGCAGAGTGAAGCGATTCGTTTTCATT 280
||||||.||.||||..|..||..|.||||..|||||.||||..|||||..
BL02777___aro 231 ATCCATCGATATGTTTATGAAGCTCCAGACGGAAGCCATTCAATTTCACC 280
BSNT_03375___ 281 TGGATCGCTCCTCATGCATCATCGCATTCGGTGGCGGTGTTGTAGGGGAT 330
|.||.|||||.||||||||..|.||..|.||.|||||||||||.||.|||
BL02777___aro 281 TTGACCGCTCGTCATGCATTGTGGCGCTGGGCGGCGGTGTTGTCGGCGAT 330
BSNT_03375___ 331 CTTGCCGGTTTTGTGGCTGCCACTTTTATGCGCGGCATTGATTTCATCCA 380
|||||.||.||.||.|||.|.|||||||||.|.|||||.||||...|.||
BL02777___aro 331 CTTGCAGGATTCGTCGCTTCAACTTTTATGAGGGGCATCGATTATGTGCA 380
BSNT_03375___ 381 AATGCCTACGACGCTCTTGGCGCATGACAGCGCAGTCGGAGGAAAAGTAG 430
|.|.||.|||||.||..||.|.||||||||||||||||||||.|||||.|
BL02777___aro 381 ATTCCCAACGACTCTGCTGTCTCATGACAGCGCAGTCGGAGGGAAAGTGG 430
BSNT_03375___ 431 CCGTGAACCATCCGCTTGGAAAAAATCTAATCGGTGCGTTTTATCAGCCG 480
||.|.||.||.|||||.||||||||..|||||||.||.|||.||||||||
BL02777___aro 431 CCATTAATCACCCGCTCGGAAAAAACTTAATCGGCGCTTTTCATCAGCCG 480
BSNT_03375___ 481 AAAGCCGTGCTCTATGATACAGATTTCCTGCGTTCTCTGCCTGAAAAAGA 530
||.||.|||.|.|||||.||.||.|.||||.|..|.||.||.||||||||
BL02777___aro 481 AAGGCGGTGGTATATGACACCGAATGCCTGAGCACGCTTCCGGAAAAAGA 530
BSNT_03375___ 531 -----GCTTAGGTCCGGAATGGCAGAAGTGATTAAACACGCTTTTATCTA 575
|.|.||||| |.||.|||||.|||||.|||||.||||||..
BL02777___aro 531 AATGCGTTCAGGTC-----TTGCGGAAGTCATTAAGCACGCATTTATCCG 575
BSNT_03375___ 576 TGACAGAGCGTTTC-TGGAGGAGCTGCTGAATATCCACTCACT----GCG 620
||| .||...|||| ||.|.||..||||.||..|..|.|||.| |||
BL02777___aro 576 TGA-TGAATCTTTCTTGAACGAATTGCTTAAACTTGATTCAATAGAAGCG 624
BSNT_03375___ 621 TGATATCACTAATGATCAGCTGAATGACATGATTTTTAAAGGCATTTCAA 670
||.||.|..|..|||||.|.|||.|||.|||..|||||||||||.|
BL02777___aro 625 ----ATTACGACCGGCCAGCTCAGTGAAATGGTTTACAAAGGCATTTCGA 670
BSNT_03375___ 671 TTAAAGCGTCTGTCGT-TCAGCAGGATGAAAAAGAAGAGGGGATAAGAGC 719
||||||||...||.|| ||| ||.||.|||...|||.||||.||.||.||
BL02777___aro 671 TTAAAGCGGAAGTTGTCTCA-CAAGACGAACGCGAACAGGGAATCAGGGC 719
BSNT_03375___ 720 TTACTTAAACTTCGGGCATACGCTCGGTCATGCCGTTGAGGCGGAATATG 769
.||.||.|||||||||||||||||.||.||.||||||||.||.|||||.|
BL02777___aro 720 CTATTTGAACTTCGGGCATACGCTTGGCCACGCCGTTGAAGCCGAATACG 769
BSNT_03375___ 770 GATACGGGCAGATCACTCACGGTGATGCCGTAGCCCTCGGAATGCAGTTT 819
|.|||||..|||||||.||.||.||||||||.||..|.||.|||||.|||
BL02777___aro 770 GCTACGGAGAGATCACCCATGGCGATGCCGTCGCTTTAGGCATGCAATTT 819
BSNT_03375___ 820 GCTTTATATATAAGCGAAAAGACTGTAGGCTGTGAAATG-------GAC- 861
|||||.|.|.|.|||||.||| || || ||||.|| |||
BL02777___aro 820 GCTTTGTTTGTCAGCGAGAAG---GT--GC--TGAATTGTCCTGTTGACC 862
BSNT_03375___ 862 ---AGAAAACGTTTGGTCAGCTGGCTAAAAAGCCTGGGTTATCC---AA- 904
.||||| |.|.|..||||||.||||..||.||.||||| ||
BL02777___aro 863 GTACGAAAA----TCGCCGCCTGGCTGAAAAATCTCGGCTATCCGGAAAG 908
BSNT_03375___ 905 -GTCAAATCAGAA-----AAGAGACGGAAACTTCGGTTCTCTTGGACCGT 948
||.|||...||| ||.|||.| |..||.||| |.||.
BL02777___aro 909 CGTGAAACGCGAAGTTTCAACAGAAG-------CCCTTATCT---ATCGA 948
BSNT_03375___ 949 ATGATGAATGATAAGAAAACCCGTGGCGGGAAGATTCAGTTTATTGTGC- 997
||||||||.|||||.|||||.||.||.||.|..||||||| ||||.|
BL02777___aro 949 ATGATGAACGATAAAAAAACACGCGGAGGCATCATTCAGT---TTGTCCT 995
BSNT_03375___ 998 TCAATGAATTAG---GGAAAGT-TGCTGAT-CATACATTT---TCC--AG 1037
|| ||.||.|| || .||| |||.|.| ||..|.||| .|| ||
BL02777___aro 996 TC--TGGATAAGATCGG-CAGTGTGCGGCTGCACTCCTTTAAAGCCGAAG 1042
BSNT_03375___ 1038 AAAT-GAACTTGAGAGCTGGCTGAACAAATGGCGATTGGA-GGAGACATC 1085
|||| |||| |.||||||||.|..|||.||||||| ||||||| .
BL02777___aro 1043 AAATCGAAC------GATGGCTGAATATGTGGAGATTGGAGGGAGACA-A 1085
BSNT_03375___ 1086 ATGA 1089
||||
BL02777___aro 1086 ATGA 1089
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