Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03393 and BL02790

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:20
# Commandline: needle
#    -asequence dna-align/BSNT_03393___yphE.1.5803.seq
#    -bsequence dna-align/BL02790.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03393___yphE-BL02790.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03393___yphE-BL02790.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03393___yphE
# 2: BL02790
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 211
# Identity:     151/211 (71.6%)
# Similarity:   151/211 (71.6%)
# Gaps:          14/211 ( 6.6%)
# Score: 497.5
# 
#
#=======================================

BSNT_03393___      1 TTGAATCTGGCATTGATGAAAATGTGGTTTGCACTAGGG-TCCATGGGTC     49
                     .|||||.|.|...||.|.|||||||||||||| ||.||| ||.|||||.|
BL02790            1 GTGAATGTCGGTCTGTTAAAAATGTGGTTTGC-CTTGGGATCAATGGGCC     49

BSNT_03393___     50 TGATGTTTCTGGCTGTAGCTT-CCATCTATTTAAGCCGCTTTAAGTGCCA     98
                     |||||||..|.||.|| |.|| ||||.||..|||||.|.|.|||.|...|
BL02790           50 TGATGTTCTTAGCGGT-GATTGCCATATACATAAGCAGATATAAATTTAA     98

BSNT_03393___     99 AAACCGTTTTTTGAAGATTACGATTTCA--TCAT---TCGCATACATGTG    143
                     ||||||||||||.||.||||     |||  ||.|   ||||.||||..||
BL02790           99 AAACCGTTTTTTAAAAATTA-----TCACGTCGTTTGTCGCCTACACATG    143

BSNT_03393___    144 TATGCTCATATCTGGAATTATTGTGTTTGTCGTGGTTTTTAGCGGCCCTG    193
                     |||||||||.||.||..|.||.||.|||.|.||.||.||.||||||||.|
BL02790          144 TATGCTCATCTCCGGCGTGATCGTCTTTTTTGTCGTCTTCAGCGGCCCCG    193

BSNT_03393___    194 TCAATGAATAA    204
                     ||||.||||||
BL02790          194 TCAACGAATAA    204


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