Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03395 and BL02792

See Amino acid alignment / Visit BSNT_03395 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:21
# Commandline: needle
#    -asequence dna-align/BSNT_03395___engA.1.5803.seq
#    -bsequence dna-align/BL02792___engA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03395___engA-BL02792___engA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03395___engA-BL02792___engA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03395___engA
# 2: BL02792___engA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1317
# Identity:    1049/1317 (79.7%)
# Similarity:  1049/1317 (79.7%)
# Gaps:          12/1317 ( 0.9%)
# Score: 4139.0
# 
#
#=======================================

BSNT_03395___      1 ATGGGTAAACCTGTCGTAGCCATTGTCGGGAGACCAAATGTAGGAAAATC     50
                     |||||.|||||||||||||||||.||.||.|||||.|||||.||.||.||
BL02792___eng      1 ATGGGAAAACCTGTCGTAGCCATAGTTGGAAGACCCAATGTGGGGAAGTC     50

BSNT_03395___     51 CACAATCTTTAACCGGATTGCGGGAGAAAGAATTTCAATAGTAGAAGATA    100
                     |||.|||||||||.||||.|||||.|||||||||||.||.||.|||||||
BL02792___eng     51 CACGATCTTTAACAGGATCGCGGGCGAAAGAATTTCGATTGTGGAAGATA    100

BSNT_03395___    101 CCCCTGGCGTGACAAGGGATCGGATATACAGCTCGGCTGAATGGCTGAAT    150
                     |.|||||||||||..|||||||||||||||||||.||.||.|||||||||
BL02792___eng    101 CACCTGGCGTGACGCGGGATCGGATATACAGCTCTGCCGAGTGGCTGAAT    150

BSNT_03395___    151 TATGATTTTAATTTGATTGATACGGGCGGTATTGATATCGGTGATGAGCC    200
                     .|.||.||.||..||||||||||.|||||.||.||..||||.||||||||
BL02792___eng    151 CACGACTTCAACCTGATTGATACAGGCGGAATCGAAGTCGGCGATGAGCC    200

BSNT_03395___    201 GTTCTTAGCGCAGATTCGCCAGCAGGCTGAAATCGCCATGGATGAAGCGG    250
                     |||.||.||||||||||||||.|||||.||.|||||||||||.|||||.|
BL02792___eng    201 GTTTTTGGCGCAGATTCGCCATCAGGCCGAGATCGCCATGGAAGAAGCAG    250

BSNT_03395___    251 ACGTGATTATTTTTATGGTGAACGGCCGTGAAGGTGTGACAGCTGCTGAT    300
                     |.|||||||||||.|||..|||||||||.|||||.||.|||||.||||||
BL02792___eng    251 ATGTGATTATTTTCATGACGAACGGCCGCGAAGGCGTCACAGCCGCTGAT    300

BSNT_03395___    301 GAAGAAGTGGCGAAAATTTTGTACCGCACAAAAAAGCCTGTTGTTTTAGC    350
                     |||||||||||.||||||||.|||||.||||||||.||.||.|||.|.||
BL02792___eng    301 GAAGAAGTGGCAAAAATTTTATACCGTACAAAAAAACCCGTCGTTCTGGC    350

BSNT_03395___    351 GGTTAATAAACTGGATAACACAGAAATGAGAGCGAATATTTATGATTTTT    400
                     ||||||||||.|||||||..|.|||||||||||.||.|||||.|||||||
BL02792___eng    351 GGTTAATAAAGTGGATAATCCTGAAATGAGAGCAAACATTTACGATTTTT    400

BSNT_03395___    401 ATTCGCTAGGCTTTGGCGAGCCGTATCCAATTTCGGGAACACACGGACTC    450
                     ||.|.||.||||||||||||||||..||.|||||.||.||.||.||.||.
BL02792___eng    401 ATGCCCTCGGCTTTGGCGAGCCGTTCCCGATTTCAGGGACGCATGGCCTT    450

BSNT_03395___    451 GGACTGGGTGATTTACTGGATGCCGTTGCA--GAGCATTTTAAAAACATT    498
                     ||.||.||.|||.|.||.||.||.||  ||  ||.||||||||||||||.
BL02792___eng    451 GGTCTCGGCGATCTGCTTGACGCGGT--CAGCGAACATTTTAAAAACATA    498

BSNT_03395___    499 CCAGAAACGAAATACAATGAGGAAGTTGTTCAATTCTGTCTGATCGGACG    548
                     ||.||.|||||.||..|.||.|||||.||||||||.||.||.|||||.||
BL02792___eng    499 CCCGAGACGAAGTATGAGGATGAAGTCGTTCAATTTTGCCTCATCGGCCG    548

BSNT_03395___    549 TCCGAATGTCGGAAAGTCTTCACTTGTGAATGCGATGCTCGGCGAAGAAC    598
                     .|||||.||||||||.||.||.|||||.||.||.|||.|.||.|||||.|
BL02792___eng    549 GCCGAACGTCGGAAAATCCTCCCTTGTAAACGCCATGATTGGAGAAGAGC    598

BSNT_03395___    599 GCGTTATTGTCAGCAACGTGGCTGGAACGACAAGAGATGCTGTTGATACG    648
                     |||||||.||||||||..|.||.||||||||..|.||.||..||||.|||
BL02792___eng    599 GCGTTATCGTCAGCAATATTGCGGGAACGACGCGCGACGCCATTGACACG    648

BSNT_03395___    649 TCATTTACTTACAACCAGCAGGAG--TTTGTCATTGTCGATACTGCAGGT    696
                     ...|||||.|||||.||  |.|||  ||||||||.||.|||||.||.||.
BL02792___eng    649 AGGTTTACATACAATCA--AAGAGACTTTGTCATCGTGGATACAGCCGGG    696

BSNT_03395___    697 ATGCGAAAAAAAGGGAAAGTCTATGAAACGACTGAGAAGTATAGTGTACT    746
                     |||.|||||||.||||||||.|||||..|.|||||.||.||.||.||.||
BL02792___eng    697 ATGAGAAAAAAGGGGAAAGTGTATGAGGCAACTGAAAAATACAGCGTCCT    746

BSNT_03395___    747 GCGGGCGCTAAAAGCGATTGACCGCTCAGAAGTCGT-GGCGGTTGTGCTG    795
                     .||.||..||||.|||||.|||||.||||||||||| .|| ||.||..||
BL02792___eng    747 CCGAGCTTTAAAGGCGATCGACCGTTCAGAAGTCGTCTGC-GTCGTCTTG    795

BSNT_03395___    796 GATGGCGAAGAAGGCATTATTGAACAGGACAAGCGTATCGCCGGTTATGC    845
                     ||.||||||||||||||||||||.|||||||||||.||.|||||.|||||
BL02792___eng    796 GACGGCGAAGAAGGCATTATTGAGCAGGACAAGCGGATTGCCGGCTATGC    845

BSNT_03395___    846 ACACGAAGCGGGCAAGGCCGTCGTCATCGTCGTAAACAAATGGGATGCTG    895
                     .||.|||||.||.||.||.||.||||||||||||||||||||||||||.|
BL02792___eng    846 GCATGAAGCAGGAAAAGCTGTTGTCATCGTCGTAAACAAATGGGATGCAG    895

BSNT_03395___    896 TTGACAAAGATGAGAGCACAATGAAAGAATTTGAAGAAAATATTCGCGAT    945
                     |.||.|||||.|||.|.||.||||||||||||||||||||..||.|.||.
BL02792___eng    896 TCGAAAAAGACGAGCGGACGATGAAAGAATTTGAAGAAAAGGTTAGAGAC    945

BSNT_03395___    946 CATTTTCAATTTCTGGATTATGCGCCAATCCTATTTATGTCTGCCTTAAC    995
                     ||.|||||||||.||||.||.|||||..|..|.||||||||.||.||.||
BL02792___eng    946 CACTTTCAATTTTTGGACTACGCGCCTGTTTTGTTTATGTCCGCTTTGAC    995

BSNT_03395___    996 GAAAAAACGGATCCATACGCTGATGCCTGCGATTATTAAAGCAAGTGAAA   1045
                     .|||||.||.|||||||||||||||||||||.|.||.|..||.||.||||
BL02792___eng    996 TAAAAAGCGCATCCATACGCTGATGCCTGCGGTCATGACGGCGAGCGAAA   1045

BSNT_03395___   1046 ATCATTCACTTCGAGTTCAGACGAA-CGTCTTAAATGATGTCATCATGGA   1094
                     |.|||||..|..|.||.|||||.|| ..|||| ||||||.||||.|||||
BL02792___eng   1046 ACCATTCGATGAGGGTGCAGACCAATATTCTT-AATGATATCATTATGGA   1094

BSNT_03395___   1095 TGCTGTGGCAATGAACCCGACACCGACTCATAACGGTTCTCGTTTGAAAA   1144
                     |||.|||||.|||||||||||.|||||.|||||.||....||.||.||||
BL02792___eng   1095 TGCGGTGGCTATGAACCCGACGCCGACGCATAATGGAAACCGGTTAAAAA   1144

BSNT_03395___   1145 TTTACTATGCGACTCAAGTGTCGGTAAAGCCGCCAAGCTTCGTTGTGTTT   1194
                     ||||.||||||||.||||||.|.||.||||||||.|..||.||.||.|||
BL02792___eng   1145 TTTATTATGCGACACAAGTGGCTGTGAAGCCGCCGACATTTGTCGTATTT   1194

BSNT_03395___   1195 GTAAACGATCCGGAATTGATGCATTTTTCATACGAACGGTTTTTAGAAAA   1244
                     ||.||.||.||.||..|||||||||||||.||||||||.|||||.|||||
BL02792___eng   1195 GTCAATGACCCTGAGCTGATGCATTTTTCTTACGAACGCTTTTTGGAAAA   1244

BSNT_03395___   1245 CCGAATCAGAGACGCGTTCGGTTTTGAGGGGACACCAATCAAAATATTTG   1294
                     |||.||..|.|||||.|||||.|||||.||.||||||||||..||.||.|
BL02792___eng   1245 CCGGATACGCGACGCCTTCGGATTTGAAGGAACACCAATCAGGATTTTCG   1294

BSNT_03395___   1295 CAAGAGCTAGAAAATAA   1311
                     |||||||.|||||||||
BL02792___eng   1295 CAAGAGCAAGAAAATAA   1311


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