Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00207 and BL02799
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:52
# Commandline: needle
# -asequence dna-align/BSNT_00207___ybxB.1.5803.seq
# -bsequence dna-align/BL02799___ybxB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00207___ybxB-BL02799___ybxB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00207___ybxB-BL02799___ybxB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00207___ybxB
# 2: BL02799___ybxB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 621
# Identity: 463/621 (74.6%)
# Similarity: 463/621 (74.6%)
# Gaps: 30/621 ( 4.8%)
# Score: 1674.0
#
#
#=======================================
BSNT_00207___ 1 ATGAGTGAGCACTATTATTCAGAAAAACCTTCAGTGAAAAGCAACAAGCA 50
||||.|||.||.||||||||.|||||||||||||..|||||| ||||
BL02799___ybx 1 ATGACTGACCATTATTATTCGGAAAAACCTTCAGCAAAAAGC----AGCA 46
BSNT_00207___ 51 ----AACCTGGTCTTTTAGGCTTCGGAATAAAGA--TTTCACGTTTACCA 94
||..|||.|.||| .||||..|||....|| ||| ||.||||.||
BL02799___ybx 47 GATCAATGTGGGCATTT-CGCTTGAGAAACCGGACGTTT-ACTTTTATCA 94
BSNT_00207___ 95 GCGACAGCGGGGTTTTTTCTAAAAAAGAAGTTGATTTCGGCTCCCGCCTG 144
||||||||||.||||||||.||||.||||||.||.||.|||||..|.|||
BL02799___ybx 95 GCGACAGCGGAGTTTTTTCAAAAAGAGAAGTGGACTTTGGCTCAAGGCTG 144
BSNT_00207___ 145 CTGATTGATTCTTTTGAAGAGCCTGAGGTTGAGGGCAGCTTTTTGGATGT 194
||||||||..||||....||.||.||.|..||.||....|||||||||||
BL02799___ybx 145 CTGATTGAAGCTTTCCGGGAACCGGATGCAGAAGGTGATTTTTTGGATGT 194
BSNT_00207___ 195 AGGCTGCGGGTACGGCCCGATTGGTTTATCGCTGGCCAGC-GACTTTAAA 243
|||||||||.||.||||||||||||.|.|||||.| |.|| ||.||..||
BL02799___ybx 195 AGGCTGCGGCTATGGCCCGATTGGTCTTTCGCTTG-CTGCGGATTTCGAA 243
BSNT_00207___ 244 GACCGGACTATCCACATGATTGACGTTAATGAGAGAGCCGTAGAACTATC 293
||.||.|...|.||||||||.||.||||||||.|||||.||.|||||.||
BL02799___ybx 244 GATCGAATGGTTCACATGATCGATGTTAATGAAAGAGCTGTCGAACTTTC 293
BSNT_00207___ 294 AAATGAAAATGCG-GAACAAAACGGA---ATAACAAATGTTAAGATTTAT 339
.||.|||||.||| .||..||.|.|| |.|||| |.|||||.||.
BL02799___ybx 294 GAAGGAAAACGCGTTAAATAATCAGATCGACAACA----TAAAGATCTAC 339
BSNT_00207___ 340 CAAAGCGATTTGTTTTCAAACATTGATTCTGCTCAAACATTTGCTTCTAT 389
||.||.|||.|||||.|.|||.|.||..||||..|||.|||.||||||||
BL02799___ybx 340 CAGAGTGATCTGTTTGCCAACGTCGAACCTGCAAAAAAATTCGCTTCTAT 389
BSNT_00207___ 390 TCTTACAAATCCCCCAATCCGAGCCGGAAAAAAAGTTGTCCATGCTATCT 439
|.||||.||||||||.||.||.|||||.||||||..|||.||.||.||||
BL02799___ybx 390 TATTACTAATCCCCCCATACGCGCCGGGAAAAAAACTGTGCACGCCATCT 439
BSNT_00207___ 440 TTGAGAAAAGCGCTGAACACTTAAAAG----CTTCAGGTGAATTGTGGAT 485
||||.||||||||||||||.|| | |||||||.||..|||||.|
BL02799___ybx 440 TTGAAAAAAGCGCTGAACATTT----GCGGCCTTCAGGAGAGCTGTGGGT 485
BSNT_00207___ 486 CGTCATACAGAAAAAGCAGGGCGCGCCTTCTGCCATTGAAAAGCTCGAGG 535
||||||.||||||||.||.||||.||||||||||||||||||..|..|.|
BL02799___ybx 486 CGTCATTCAGAAAAAACAAGGCGGGCCTTCTGCCATTGAAAAATTAAAAG 535
BSNT_00207___ 536 AACTGTTCGATGAGGTTTCTGTCGTTCAAAAAAAGAAAGGCTATTATATC 585
||||.||.|..||.|||...|||||||||||||||||||..||.||||||
BL02799___ybx 536 AACTTTTTGCGGACGTTGAAGTCGTTCAAAAAAAGAAAGCGTACTATATC 585
BSNT_00207___ 586 ATAAAAGCAAAAAAAGTTTGA 606
||.||||||||||||||||||
BL02799___ybx 586 ATCAAAGCAAAAAAAGTTTGA 606
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