Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00203 and BL02802
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:51
# Commandline: needle
# -asequence dna-align/BSNT_00203___rplA.1.5803.seq
# -bsequence dna-align/BL02802___rplA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00203___rplA-BL02802___rplA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00203___rplA-BL02802___rplA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00203___rplA
# 2: BL02802___rplA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 699
# Identity: 606/699 (86.7%)
# Similarity: 606/699 (86.7%)
# Gaps: 0/699 ( 0.0%)
# Score: 2658.0
#
#
#=======================================
BSNT_00203___ 1 ATGGCTAAAAAAGGTAAAAAGTACGTTGAAGCTGCTAAGCTTGTAGACCG 50
||||||||||||||||||||.|||||.||||||||.|||||||||||.||
BL02802___rpl 1 ATGGCTAAAAAAGGTAAAAAATACGTCGAAGCTGCCAAGCTTGTAGATCG 50
BSNT_00203___ 51 TTCTAAAGCTTACGACGTCTCTGAAGCAGTAGCTCTCGTTAAAAAAACAA 100
|.|.||||||||||||||....|||||..|.|..||.||.||||||||||
BL02802___rpl 51 TACAAAAGCTTACGACGTAAACGAAGCGATTGAGCTTGTGAAAAAAACAA 100
BSNT_00203___ 101 ACACAGCTAAATTCGACGCTACAGTTGAAGTGGCTTTCCGTTTAGGGGTT 150
||||||||||||||||.|||||.|||||||.|||.||.||||||||.|||
BL02802___rpl 101 ACACAGCTAAATTCGATGCTACTGTTGAAGCGGCATTTCGTTTAGGTGTT 150
BSNT_00203___ 151 GACCCTCGTAAAAACGACCAGCAAATCCGTGGAGCAGTTGTGCTTCCAAA 200
|||||||||||||||||||||||||||||.||.||||||||.||||||||
BL02802___rpl 151 GACCCTCGTAAAAACGACCAGCAAATCCGCGGTGCAGTTGTACTTCCAAA 200
BSNT_00203___ 201 CGGAACTGGTAAAACTCAGCGCGTTCTCGTTTTCGCAAAAGGCGAAAAAG 250
||||||.||.|||||||||||||||||.||||||||.|||||.|||||||
BL02802___rpl 201 CGGAACAGGCAAAACTCAGCGCGTTCTTGTTTTCGCTAAAGGTGAAAAAG 250
BSNT_00203___ 251 CGAAAGAAGCTGAAGCTGCTGGTGCAGATTTCGTAGGCGACACTGACTAC 300
||||||||||.|||||||||||||||||.|.|||||||||..|.||.|||
BL02802___rpl 251 CGAAAGAAGCAGAAGCTGCTGGTGCAGACTACGTAGGCGATGCAGATTAC 300
BSNT_00203___ 301 ATCAACAAAATTCAACAAGGCTGGTTCGATTTCGATGTTATCGTAGCTAC 350
||||||||||||||.|||||||||||.|||||.|||||.|||||.||.||
BL02802___rpl 301 ATCAACAAAATTCAGCAAGGCTGGTTTGATTTTGATGTGATCGTTGCGAC 350
BSNT_00203___ 351 ACCTGACATGATGGGTGAAGTTGGTAAAATCGGTCGTGTACTTGGACCAA 400
.||||||||||||||||||||.|||||||||||.||.||.||||||||||
BL02802___rpl 351 TCCTGACATGATGGGTGAAGTCGGTAAAATCGGACGCGTGCTTGGACCAA 400
BSNT_00203___ 401 AAGGTTTAATGCCAAACCCTAAAACTGGTACAGTTACTTTCGAAGTTGAA 450
|||||.|.|||||||||||||||||.||.||.|||||.||.|||||||||
BL02802___rpl 401 AAGGTCTTATGCCAAACCCTAAAACAGGAACGGTTACATTTGAAGTTGAA 450
BSNT_00203___ 451 AAAGCGATCGGCGAAATCAAAGCTGGTAAAGTTGAATACCGCGTTGATAA 500
|||||..||..||||||||||||.||||||||||||||||||||||||||
BL02802___rpl 451 AAAGCAGTCAACGAAATCAAAGCGGGTAAAGTTGAATACCGCGTTGATAA 500
BSNT_00203___ 501 AGCTGGAAACATTCATGTTCCTATCGGTAAAGTTTCTTTCGAGGATGAAA 550
|||.||||||||.||.|||||.|||||.|||||.||||||||.||.|..|
BL02802___rpl 501 AGCAGGAAACATCCACGTTCCAATCGGAAAAGTGTCTTTCGAAGAAGGCA 550
BSNT_00203___ 551 AACTTGTTGAGAACTTCACAACAATGTACGATACAATCCTTAAAGCTAAA 600
|.|||||.|||||||||.|.|||||||||||.|||||..|.|||||.||.
BL02802___rpl 551 AGCTTGTAGAGAACTTCGCGACAATGTACGACACAATTTTGAAAGCGAAG 600
BSNT_00203___ 601 CCTGCTGCAGCTAAAGGCGTTTACGTGAAAAACGTTGCTGTAACTTCTAC 650
||||||||.||||||||.||.|||||||||||||||.||||.||.|||||
BL02802___rpl 601 CCTGCTGCTGCTAAAGGTGTATACGTGAAAAACGTTTCTGTTACATCTAC 650
BSNT_00203___ 651 TATGGGACCTGGTGTCAAAGTAGACTCTTCAACTTTTAACGTAAAATAA 699
.|||||||||||..|||||||.|||.||||||||||.||||||||||||
BL02802___rpl 651 AATGGGACCTGGAATCAAAGTGGACCCTTCAACTTTCAACGTAAAATAA 699
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