Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00715 and BL02809
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:21
# Commandline: needle
# -asequence dna-align/BSNT_00715___kipI.1.5803.seq
# -bsequence dna-align/BL02809___kipI.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00715___kipI-BL02809___kipI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00715___kipI-BL02809___kipI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00715___kipI
# 2: BL02809___kipI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 795
# Identity: 502/795 (63.1%)
# Similarity: 502/795 (63.1%)
# Gaps: 132/795 (16.6%)
# Score: 1445.5
#
#
#=======================================
BSNT_00715___ 1 ATGACTGTACGATATCAAA------TCGAA-------------CAGCTCG 31
.|.||| ||||| |.|||||
BL02809___kip 1 -------------TTGAAAAATCTTTCGAATGCGACAATGTCTCCGCTCG 37
BSNT_00715___ 32 GTGATTCTGCAATGATGATCC-GATTCGGAGAAGAAATCAATGAACAGGT 80
|.||.||.||..|.||.|||| |.|| |||||.|..||.|..||||||
BL02809___kip 38 GCGACTCCGCGGTTATCATCCAGCTT-GGAGAGGGGATAAGCGAACAG-- 84
BSNT_00715___ 81 CAACGGCA--TTGTC--CACGCCGCGGCCGCTTA-------TATAGAAGA 119
|| ||| .|||| || ||| ||||.| .||.||| |
BL02809___kip 85 --AC-GCACCGTGTCGTCA----GCG--CGCTGACAAAGCGGATTGAA-A 124
BSNT_00715___ 120 AC-AGCCATTTCCGGGATTCATTGAATGTATCCCGGCTTTTACAAGTCTA 168
|| |.||.|||||.||.||.|||||.|||.|.||||||||.||.|||.|.
BL02809___kip 125 ACGATCCGTTTCCCGGTTTTATTGAGTGTGTGCCGGCTTTCACGAGTGTG 174
BSNT_00715___ 169 ACTGTATTTTATGATATGTATGAAGTGTA---CAAGCAT---TTGCCTCA 212
||.||.||.|||.|....|.||||||.|| |||| || ..||..||
BL02809___kip 175 ACCGTTTTCTATCAGCCATTTGAAGTATACCGCAAG-ATGGAGAGCGGCA 223
BSNT_00715___ 213 AGGC-----ATAAGCTCACCTTTTGAGAAGGTCAAGTGC----------- 246
|||| || ||.||.|.|||.||||| ||..||
BL02809___kip 224 AGGCTGTTGAT----TCTCCGTATGAAAAGGT-AAAAGCCCTCCTCGACC 268
BSNT_00715___ 247 --GATGTCGAAGAGCGC---CTGGCAGAAATAGCCGAAGACTATGAGGTC 291
.||.||.||||||.| .|||.|||| .|||| ||.||
BL02809___kip 269 ATCATCTCCAAGAGCTCACAATGGAAGAA-------GAGAC----AGATC 307
BSNT_00715___ 292 AACCGC-CGTATTGTAGAAATTCCTGTCTGCTATGGCGGTGAATTTGGTC 340
|.||| || ||.||||||||.||.||.||.|||||....||.||.|
BL02809___kip 308 -AGCGCACG----GTGGAAATTCCGGTTTGTTACGGCGGCCGTTTCGGCC 352
BSNT_00715___ 341 CGGATTTAGAAGAGGTGGCGAAGATCAATCAG-----CTGTCACCGGAGG 385
|.|||||.||.||.|||||..|.||||| |.| ||| ||| |||
BL02809___kip 353 CTGATTTGGAGGAAGTGGCCGACATCAA-CGGCCTGACTG-CAC---AGG 397
BSNT_00715___ 386 AAGTAATCGACATTCATACAAACGGTGAATATGTGGTGTATATGCTTGGC 435
||||.|||||.|||||.||....|||||.||..|.||.||||||.|.|||
BL02809___kip 398 AAGTCATCGATATTCACACCTCGGGTGAGTACCTCGTTTATATGATCGGC 447
BSNT_00715___ 436 TTCGCGCCCGGTTTTCCTTTTCTAGGCGGGATGTC--AAAACGCATTGCA 483
||.|||||.||.||.||||..||||||||.||||| |||| .||.||.
BL02809___kip 448 TTTGCGCCGGGCTTCCCTTACCTAGGCGGAATGTCTGAAAA--GATAGCC 495
BSNT_00715___ 484 GCTCCGAGAAAATCATCGCCAAGACCGTCGATTCCCGCAGGTTCGGTCGG 533
||.|||.|....|||||.||..|..|.|||||||||||.|||||.|||||
BL02809___kip 496 GCACCGCGGCGGTCATCTCCTCGGACTTCGATTCCCGCCGGTTCAGTCGG 545
BSNT_00715___ 534 TATTGCGGGATTGCAGACAGGCGTTTACCCGATTTCAACGCCGGGCGGCT 583
.||.||.||..||||.||||||||.||.||..||||||||||||||||||
BL02809___kip 546 AATAGCCGGCATGCAAACAGGCGTCTATCCCCTTTCAACGCCGGGCGGCT 595
BSNT_00715___ 584 GGCAGCTGATCGGCAAAACGCCGCTGGCTCTTTTCCGGCCGCAGGAAAAC 633
||||||||||||||||.||||||||.|...|.|||..|||..|.|||.|.
BL02809___kip 596 GGCAGCTGATCGGCAATACGCCGCTTGAATTATTCAAGCCTTATGAACAG 645
BSNT_00715___ 634 CCGCCGA-CATTGCTGCGGGCGGGAGATACTGTGAAATTCGTTCGCATCT 682
||.|||| |.|| |||.|.||.||.||||..||||||||.||..||.|..
BL02809___kip 646 CCTCCGAGCCTT-CTGAGAGCAGGGGATATCGTGAAATTTGTCAGCGTGA 694
BSNT_00715___ 683 CAGAAAAAGACTATCACGC-CTATAAGGAGGAGTCCAA---TTGA 723
|||||.|.||.|||||||| || .|||||||.| || ||||
BL02809___kip 695 CAGAAGAGGAGTATCACGCGCT-GAAGGAGGGG---AAATCTTGA 735
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