Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00728 and BL02816
See
Amino acid alignment /
Visit
BSNT_00728 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:21
# Commandline: needle
# -asequence dna-align/BSNT_00728___mtlR.1.5803.seq
# -bsequence dna-align/BL02816___mtlR.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00728___mtlR-BL02816___mtlR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00728___mtlR-BL02816___mtlR.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00728___mtlR
# 2: BL02816___mtlR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2250
# Identity: 1395/2250 (62.0%)
# Similarity: 1395/2250 (62.0%)
# Gaps: 366/2250 (16.3%)
# Score: 3991.5
#
#
#=======================================
BSNT_00728___ 1 ATGTATATGACTGCCAGAGAACAAAAGCTGTTAAAGCACTTATTATTACA 50
|||| ||.|.||.|| ||| .||
BL02816___mtl 1 ------ATGA------------AATACCTTTT---GCA---------TCA 20
BSNT_00728___ 51 AAACAGATATATAACCGTAACTGAGCTTGCTGAGCT-GATGCAAGTCAGC 99
||||.|.|||.|.|..||.|.|||..||||.| ||| .||..||||||||
BL02816___mtl 21 AAACCGTTATGTCAAAGTCAATGAAATTGCCG-GCTATATAGAAGTCAGC 69
BSNT_00728___ 100 ACGAGAACCATTCACAGGGAACTCAAATCAATTAAA-CCG--CTG---AT 143
||.|||||..|.|||.|.||.||||||.|..||||| ||| ||| |.
BL02816___mtl 70 ACAAGAACGGTCCACCGCGAGCTCAAAGCGGTTAAATCCGTTCTGGACAA 119
BSNT_00728___ 144 GGAAACCGTGGGGCTTACGTTAGATAAACAGCCCGGTAAAGGGTTGAAAG 193
|.|.| |||||..|.|.|||||.|||||.||.|||||.||||||.
BL02816___mtl 120 GTACA------GGCTTCAGCTTGATAAGCAGCCGGGAAAAGGCTTGAAAC 163
BSNT_00728___ 194 CAGTGGGAAG--TCCCGAGGATAAACAAA-AGCTGCTTACTGATTTATCA 240
..||.|| || |.|.||| ||||| |||.||||..||| |
BL02816___mtl 164 TGGTCGG-AGCCTACAGAG-----ACAAACAGCGGCTTCTTGA------A 201
BSNT_00728___ 241 TAT--------GAACAG-CAT---GAATACAGCGCCGACGAACGGAAACT 278
.|| |.|||| ||| ||||||||.|||||.|||||.||.||
BL02816___mtl 202 GATCTGTCCCGGGACAGTCATGTCGAATACAGTGCCGATGAACGAAAGCT 251
BSNT_00728___ 279 GCTCATTCTTTGTTCGTTATTAGAGTCTCAGGAGCCCGTCAAACTGTACA 328
..|.|||.|.||..||.|..|.||..|....|||||..||||.||.||.|
BL02816___mtl 252 TTTGATTTTATGCGCGATGCTTGAAACGGGAGAGCCGATCAAGCTTTATA 301
BSNT_00728___ 329 CGCTTGCTCATGATCTCCAGGTGACGAATGCCACGGTCAGCTATGA-CTT 377
|..||||.|||||..|.|||||||||...||.|||.|||||.|.|| |||
BL02816___mtl 302 CAATTGCCCATGACTTGCAGGTGACGGCGGCAACGATCAGCAACGATCTT 351
BSNT_00728___ 378 AGATGAGCTCGAGAAGTGGATTTCTCCCTTCGGACTGACACTGATCCGCA 427
||.|||||.|||||||||||..||||.|||||.||..|.||||||.|.|
BL02816___mtl 352 -GACGAGCTGGAGAAGTGGATCGCTCCATTCGGCCTTTCGCTGATCAGAA 400
BSNT_00728___ 428 AAAGAGGTTTTGGCATCCAGCTCATAGGGCCGGAGAATGCGAAACGGAAA 477
|||||||.|..||.||..||||.|..|||||||||.|.||.||.||||||
BL02816___mtl 401 AAAGAGGCTACGGTATAGAGCTGAGGGGGCCGGAGGACGCCAAGCGGAAA 450
BSNT_00728___ 478 ATTGTCGGCAACTTGATTGTGAACCG----TCTCGACATCCAAATGTTTT 523
||.|||||.||||||||.| ||| .|||||..|.||...||||.
BL02816___mtl 451 ATCGTCGGAAACTTGATGG----CCGACAAGCTCGATGTTCAGCAGTTTC 496
BSNT_00728___ 524 TGGAAGCGGTTGAATTAAACATCAAAGGAAAAACCGATTCTTCAGAGAAA 573
|||||.||.|.|||.|.||.||.|||||.||.|.|||..|..|.||||||
BL02816___mtl 497 TGGAAACGATCGAAATGAATATTAAAGGCAAGAACGAAGCGCCGGAGAAA 546
BSNT_00728___ 574 ATGTTCGGGGTTGTCAGCAAAGGTGAGCTGCTAAAAATGG----AGCGCA 619
||.|||||.||.||||||...||..|..||||.|||..|| ||.||
BL02816___mtl 547 ATATTCGGTGTCGTCAGCCGGGGGAAATTGCTGAAAGCGGAAAAAGTGC- 595
BSNT_00728___ 620 TCTTATTTCAGCTCAAAGAAAA-AATCG-CTTTTTCATTGTCCGACAGCT 667
|.||||||.|.|||||||| .||.| ||||.|| |.||||||||..
BL02816___mtl 596 ---TGTTTCAGATGAAAGAAAAGTATGGACTTTCTC--TTTCCGACAGTG 640
BSNT_00728___ 668 CCTATATAGCGCTCGTCGTCCATCTGACGTATGCGATCGAACGAATTAAG 717
|.||.||.||.||.||||||||..||||||.|||||||||.||.||..||
BL02816___mtl 641 CATACATCGCTCTGGTCGTCCACTTGACGTTTGCGATCGAGCGGATACAG 690
BSNT_00728___ 718 CTTGGGGAAACCATCACCATGGAGCAAAATGAGCTTGA-GGAACTGAAGA 766
||.||.||||..||||..|||.|..||.|.|| .|||| |||.||||||.
BL02816___mtl 691 CTCGGTGAAATGATCAATATGAATGAAGAAGA-ATTGACGGATCTGAAGC 739
BSNT_00728___ 767 ATGCGAAGGAATCCAGCTCGGCTCTTGAAATCGCG--------------G 802
.|.||||.||.| |||||.|.||| |
BL02816___mtl 740 GTACGAAAGAGT------------TTGAACTGGCGCTTGCGCTTGCAAAG 777
BSNT_00728___ 803 GCGAGCTTGAACGTGCCTTCGGCGTGACGATTCCAGAGGCGGAGGTCGGC 852
|| |||||||..|||.||...|||||.|||.||.||.||.||||..||.
BL02816___mtl 778 GC--GCTTGAAGATGCGTTTCACGTGAAGATACCCGAAGCTGAGGCGGGG 825
BSNT_00728___ 853 TATATTACAATCCATCTTCGAAGCGCCAATCGAAAA--TACAAAACAGAA 900
||||||||.||.|||.|..|||||||||| .|||| |.|||||..||.
BL02816___mtl 826 TATATTACGATGCATTTAAGAAGCGCCAA--CAAAAGCTTCAAAATCGAC 873
BSNT_00728___ 901 TACAAAGCGCAGGAAATTGAGCTGGAAACAGCCCTGCA-AACAAAGCGGC 949
||||.||||.|.||.||.||||||||.||.||.|| || |||.||...||
BL02816___mtl 874 TACAGAGCGGAAGATATCGAGCTGGATACTGCGCT-CAGAACGAAAAAGC 922
BSNT_00728___ 950 TCATTGCTTTTATTTCAGACAAAATCAGAATGGATCTGAC--GAAAAACT 997
|.||.|.|||.||.||..|.||||...|.|||.||.|.|| |.||...|
BL02816___mtl 923 TGATCGATTTCATCTCGCAAAAAACGGGCATGAATTTAACCGGCAATCAT 972
BSNT_00728___ 998 ACTCTTTATATGAAGGCTTGATTGCCCATTTGGAGCCGGCCGTCAGCCGC 1047
.|.||| ||||||||.||.||.|||||..|.||.|||||..|||.|||.
BL02816___mtl 973 TCGCTT--TATGAAGGATTAATCGCCCACCTTGAACCGGCGATCATCCGG 1020
BSNT_00728___ 1048 ATAAAAGAAAATATTGAGATATACAATCCGATGAAGGAACAAATCAAGCG 1097
||.||||||||.||...|.|..|.||||||.|.|..||.||..||||...
BL02816___mtl 1021 ATCAAAGAAAAGATGTCGGTGCATAATCCGTTAACAGAGCAGGTCAAAAA 1070
BSNT_00728___ 1098 CGATTATTTTCTGCTTTATATGGCGATCGAAGAAGGCGTCGAAAAGTATT 1147
.|||||||||||.||.||||||||.||.||.||||||||||||| ||||
BL02816___mtl 1071 AGATTATTTTCTCCTATATATGGCCATAGAGGAAGGCGTCGAAA--TATT 1118
BSNT_00728___ 1148 TT--CCGGGCATGTCC--TTTACTGATGATGAAATCGCTTTTATCGTTCT 1193
|| |||| |..||| |||.|.|||||.|||||.|||||||||||.||
BL02816___mtl 1119 TTTCCCGG--AAATCCGGTTTCCAGATGAAGAAATTGCTTTTATCGTCCT 1166
BSNT_00728___ 1194 TCACTTTGGCTCGGCTCTTGAAAT---CAAAAAAGAAGAAG-CAAAAGTG 1239
|||||||||.|||||.|||||.|| ||||.||.|||.|| || |.
BL02816___mtl 1167 TCACTTTGGATCGGCGCTTGAGATGAGCAAACAAAAAGTAGACA----TC 1212
BSNT_00728___ 1240 AAAGCGCTTGTCGTCTGCTCAAGCGGGATCGGCTCCTCGAAAATGCTTGC 1289
||.|||||.||..|.||.||.|||||.|||||.||.||.||.|||||.||
BL02816___mtl 1213 AACGCGCTCGTGATTTGTTCGAGCGGAATCGGTTCATCAAAGATGCTGGC 1262
BSNT_00728___ 1290 CTCCAGACTGAAAAAAGAAATGCCGGAAATTGAATCGTTTGATATGTCAT 1339
|||..|..||||||||||..|.||.|||||.|..||.|||||.||.||.|
BL02816___mtl 1263 CTCGCGGTTGAAAAAAGAGCTTCCTGAAATCGCTTCCTTTGAGATATCCT 1312
BSNT_00728___ 1340 CCCTGATCGAGCTAAAGGGGAAGGATGTTCAAGCCTATGATATGATTGTG 1389
|.|||||.||.||.|||..|||..|...|.|.||||.|||.||.||.||.
BL02816___mtl 1313 CTCTGATGGAACTGAAGACGAAAAACACTGATGCCTTTGACATCATCGTT 1362
BSNT_00728___ 1390 TCCACTGTACCGATTCCTTATGAAAACATTGATTACATCATGGTCAGCCC 1439
||.||.||.|||||.||.||||||||||||||.|.|.|||..|||||.||
BL02816___mtl 1363 TCAACCGTGCCGATCCCATATGAAAACATTGACTGCGTCACCGTCAGTCC 1412
BSNT_00728___ 1440 GCTATTAAATGA---GGAAGACGCAAACCAGGTCAAGCAGTATATCAAGC 1486
|||..| ||| ||||||.|..||.|||.||||.||..|..|||..|
BL02816___mtl 1413 GCTCCT---TGACACGGAAGATGTGAAACAGATCAAACACCAGCTCACCC 1459
BSNT_00728___ 1487 GGAAGATTCCCCTTATTCTTAACAAAAAAAGAAGCACGAAGGAAGA-GGC 1535
|.||.||.||.||.||.||| |..|||||| || || |||
BL02816___mtl 1460 GAAAAATCCCGCTCATCCTT--CGGAAAAAG-----CG------GATGGC 1496
BSNT_00728___ 1536 GC---AGCAAGCTGATG----TACCTGACATGCTAGAG---GCGGCGGAA 1575
|| |..||.|.|| | |.||.||.|||||..|| || ||||||
BL02816___mtl 1497 GCCCAAAAAACCGGA-GCCGTTTCCAGATATGCTTCAGATTGC-GCGGAA 1544
BSNT_00728___ 1576 AGCATAGGGCGGTATATGGAGGTTATTCAAAATGTTCTGCGCCATTTTAC 1625
| ||.||.|..||...||..|..||||||.||.|.|||.||||||||||
BL02816___mtl 1545 A--ATCGGCCATTACGCGGCCGGCATTCAACATATACTGAGCCATTTTAC 1592
BSNT_00728___ 1626 GCT------------AGCTCAACTCAAAACAAACCCGGACCATAGCATGC 1663
|.| |||| .||.|||.||.|||.||||
BL02816___mtl 1593 GGTTGAAACGATGGAAGCT------GAATCAAGCCTGGAACATA------ 1630
BSNT_00728___ 1664 TTCTGCTAGAGCTTTTTCAACAGCTGAAGAAGGATGGCCTGATCCGT--- 1710
|.| |||| |.||||...|.||.||.|
BL02816___mtl 1631 --CGG-----------TCAA---------ACGGATTTGCGGAACCCTGGA 1658
BSNT_00728___ 1711 -GATCCGGAAAAAGCCGAGGTT-----TGCCTGGCTGA--GCGG------ 1746
|||| |||.|..|||| |||..|||.|| ||||
BL02816___mtl 1659 AGATC------AAGGCCTGGTTAAGGATGCAGGGCAGATGGCGGATGGAC 1702
BSNT_00728___ 1747 ---------GAGAA--ACAAGGGGGATTGGGAATCCCCGGAACAAACATG 1785
||||| |||.||.||..|.|||||.||||||||||.|.|.
BL02816___mtl 1703 TGATGAAAAGAGAAGCACAGGGTGGCCTCGGAATTCCCGGAACAACCTTC 1752
BSNT_00728___ 1786 GCGCTTTATCATCTCAAAAATGATGAAATCGTCC-----TGCCTTTTTTC 1830
|||||.|.||||.|.||||.|| ||.||.|| |.||.|.|||
BL02816___mtl 1753 GCGCTGTTTCATTTAAAAAGTG----AAGCGGCCGCGGTTCCCCTCTTT- 1797
BSNT_00728___ 1831 AAAATGTT-TGATCT---CAGCACC--TCCTATGAAGTGGAT----GGCA 1870
|||..|| |||||| || .||| || || ||| ||.|
BL02816___mtl 1798 -AAAGCTTATGATCTGTCCA-AACCGTTC----GA----GATCAAAGGGA 1837
BSNT_00728___ 1871 TGGACGGAATTACCCTCAGGATGACACGCATCCTCGTCATGATGGCGCCT 1920
|||||||||...||.|.|.|||||..||.||.|||.|||||.|||||||
BL02816___mtl 1838 TGGACGGAAGCGCCATGAAGATGATGCGGATGCTCATCATGCTGGCGCC- 1886
BSNT_00728___ 1921 GGCTCAT-TATCTGCTGAAGGCTCGGAGATTTTAAGCGCGATCAGCTCGG 1969
|||..|| |.|||.|.|||||.||.||||||.|.|||...||||||||..
BL02816___mtl 1887 GGCCGATCTGTCTCCGGAAGGTTCCGAGATTCTGAGCTTCATCAGCTCTT 1936
BSNT_00728___ 1970 CAATTATCGAGAGCG----GAG----AAAGCATGGCGGGGTTTCAGGAAG 2011
|.||.||.||.||.| ||| |||||||..| ||
BL02816___mtl 1937 CGATGATAGAAAGTGATGAGAGCATAAAAGCATACC------------AG 1974
BSNT_00728___ 2012 A-AGGAGAACAAGAATTGTATCAGCGGTTAAACCGCAT----------AT 2050
| .|||||.|..| |.||||.|| ||.|||| .|
BL02816___mtl 1975 ACCGGAGACCGCG------AGCAGCTGT---ACGGCATGCTGAACGTGCT 2015
BSNT_00728___ 2051 TTTTCAC------AT---GGATGAAAGA------AAAAAACATACTGTAA 2085
.|||||| || |||| ||||| |
BL02816___mtl 2016 GTTTCACCGGTTTATACAGGAT-AAAGAGTGGTGA--------------- 2049
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.