Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01698 and BL02827
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:11
# Commandline: needle
# -asequence dna-align/BSNT_01698___prsA.1.5803.seq
# -bsequence dna-align/BL02827___prsA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01698___prsA-BL02827___prsA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01698___prsA-BL02827___prsA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01698___prsA
# 2: BL02827___prsA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 942
# Identity: 617/942 (65.5%)
# Similarity: 617/942 (65.5%)
# Gaps: 138/942 (14.6%)
# Score: 1986.0
#
#
#=======================================
BSNT_01698___ 1 ATGAAGAAAATCGCAATAGCAGCTATCACTGCTACAAGCATCCTCGCTCT 50
||||||||.||.|||||.||.||.||.||.||.||||||.|.||.|||||
BL02827___prs 1 ATGAAGAAGATTGCAATTGCGGCGATTACAGCGACAAGCGTGCTGGCTCT 50
BSNT_01698___ 51 CAGTGCTTGCAGCAGCGGCGACAAAGAAGTCATCGCAAAAACAGACGCAG 100
|||.||.||||||.|.||.||....||.||..|.||..|||||.|.||.|
BL02827___prs 51 CAGCGCATGCAGCGGGGGAGATTCTGAGGTTGTTGCGGAAACAAAAGCTG 100
BSNT_01698___ 101 GCGATGTAACAAAAGGCGAGCTTTACACAAACATGAAGAAAACA--GCTG 148
|..||.|.|||||||..||.||||| .|||||||.|| ||.||| ||.|
BL02827___prs 101 GAAATATTACAAAAGAAGACCTTTA-TCAAACATTAA-AAGACAATGCCG 148
BSNT_01698___ 149 GCGCAAGCGTACTGACACA-GCTAGTGCAAGAAAAAGTATTGGACAAGAA 197
|.||...||.||||| ||| |||.||.||..||||||||.|.||..|.||
BL02827___prs 149 GAGCGGACGCACTGA-ACATGCTTGTTCAGCAAAAAGTACTCGATGATAA 197
BSNT_01698___ 198 GTATAAAGTTTCGGATAAAGAAATTGACAACAAGCTGAAAGAATACAAAA 247
.||..|.||.||.||.||||||||.|||||.||||||||.||.|||||||
BL02827___prs 198 ATACGATGTCTCCGACAAAGAAATCGACAAAAAGCTGAACGAGTACAAAA 247
BSNT_01698___ 248 CGCAGCTTGGCGATCAATATACTG-----CC--CTCGAAAAG-------- 282
.||||| || || |||.|..||
BL02827___prs 248 -----------AATCAA-----TGGGTGACCAGCTCAACCAGCTCATTGA 281
BSNT_01698___ 283 -CAATATGGCAAGGATTACCTGAAAGAACAAGTAAAATATGAATTGCTGA 331
|||.|.|||.|.||.|.|.|.||||||||..|.|||||.|||.|.||||
BL02827___prs 282 CCAAAAAGGCGAAGACTTCGTCAAAGAACAGATCAAATACGAACTTCTGA 331
BSNT_01698___ 332 CACAAAAAGCGGCTAAAGATAACATCAAAGTAACAGATGATGAAATTAAA 381
..||||||||.||.||.||||||||.||||||||.||||||||..|.|||
BL02827___prs 332 TGCAAAAAGCCGCAAAGGATAACATAAAAGTAACCGATGATGACGTAAAA 381
BSNT_01698___ 382 GAATACTGGGAAGGCTTAAAAGGCCAGATTCGCGCAAGCCACATCCTTGT 431
|||||.|..||.|||.|.||||||.|.||.|.|..|||||||||.||||
BL02827___prs 382 GAATATTATGACGGCCTGAAAGGCAAAATCCACTTAAGCCACATTCTTG- 430
BSNT_01698___ 432 CGCTGACA-AAAAG---ACAGCTGAGGAAATAGAGAAAAAGCTGAAAAAA 477
|||.| ||||| ||.|||||.|||.|.||||||||||||||||||
BL02827___prs 431 ---TGAAAGAAAAGAAAACGGCTGAAGAAGTTGAGAAAAAGCTGAAAAAA 477
BSNT_01698___ 478 GGCGAGAAATTTGATGCCCTTGCGAAGGAATACTCTACAGACACAGGCTC 527
|||||.|||||.||.|.||||||.||.||.||.||.||.||| ||..|
BL02827___prs 478 GGCGAAAAATTCGAAGACCTTGCAAAAGAGTATTCAACTGAC---GGTAC 524
BSNT_01698___ 528 AGCTACAAACGGTGGCGAACTTGGCTGGATTTCAAAA---GATAAC--GA 572
|||...|||.||.|||||.||.||||||.|....||| |||||| |.
BL02827___prs 525 AGCCGAAAAAGGCGGCGACCTCGGCTGGGTCGGCAAAGACGATAACATGG 574
BSNT_01698___ 573 ACAACTGGATTCCACATTCAGAAAAGCTGCATTCAAGTTGAAAACAAACG 622
|||| |||| |||...|||||.|||||....||||||||...||
BL02827___prs 575 ACAA--GGAT------TTCGTCAAAGCGGCATTTGCTTTGAAAACCGGCG 616
BSNT_01698___ 623 AAGTCAGCGATCCTGTGAAAACACAATTTGGCTACCATATCA-TCAAAAA 671
||.||||||..|||||||||.|.|||||.|||||.||.|||| |.|||||
BL02827___prs 617 AAATCAGCGGACCTGTGAAATCCCAATTCGGCTATCACATCATTAAAAAA 666
BSNT_01698___ 672 GACTGAAGAACGCGGCAAATACGATGATATGAAAAAAGAACTGAAATCTG 721
||| |||||||||||||||||.||.||.|||||||||||.||.|||...|
BL02827___prs 667 GAC-GAAGAACGCGGCAAATATGAAGACATGAAAAAAGAGCTTAAAAAAG 715
BSNT_01698___ 722 AAGTGCTTGAACAAAAACTAAATG----------ACAGCAATGCCGTTCA 761
||||.|..||||||||.|.||||| ||.||||| ||| |||
BL02827___prs 716 AAGTCCAAGAACAAAAGCAAAATGATCAAACTGAACTGCAAT-CCG-TCA 763
BSNT_01698___ 762 GGAAGCTGTTCAAAAA---GTCATGAAGAAGGCTGACATCGAAGTAAAAG 808
||.|.||| |||| ||| |.|||||..|..|||||||||
BL02827___prs 764 --------TTGACAAACTTGTCA--AAG-ATGCTGATTTAAAAGTAAAAG 802
BSNT_01698___ 809 ATAAAGATCTGAAAGCCACATTTAATA-------CATCTTCA-------A 844
|.|||||..||||| .||.| ||.|.||| |
BL02827___prs 803 ACAAAGAGTTGAAA--------AAACAAGTCGACCAGCGTCAAGCTCAGA 844
BSNT_01698___ 845 CAAGCAACAGCA-CTTCTTCATCTTCAAGCAATTCTAAATAA 885
||||||.||||| ||..
BL02827___prs 845 CAAGCAGCAGCAGCTGA------------------------- 861
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