Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01672 and BL02831
See
Amino acid alignment /
Visit
BSNT_01672 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:09
# Commandline: needle
# -asequence dna-align/BSNT_01672___yheE.1.5803.seq
# -bsequence dna-align/BL02831___yheE.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01672___yheE-BL02831___yheE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01672___yheE-BL02831___yheE.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01672___yheE
# 2: BL02831___yheE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 216
# Identity: 164/216 (75.9%)
# Similarity: 164/216 (75.9%)
# Gaps: 12/216 ( 5.6%)
# Score: 578.0
#
#
#=======================================
BSNT_01672___ 1 ATGATTTCTCA-TTTCAGCTGGAAACCTTTGTTCCCAAAAGAAAAGCTGC 49
||||||||||| ||||| .|||||.||..||||...||||||||.|||.|
BL02831___yhe 1 ATGATTTCTCACTTTCA-ATGGAAGCCGCTGTTTAAAAAAGAAAGGCTTC 49
BSNT_01672___ 50 CCGGATGGAAAATTTCATTTTATTATAAAGGGACCCATTATGAAGGCATC 99
||||.||||||||.||.||||||.|||||||||..|||||||||||.||.
BL02831___yhe 50 CCGGCTGGAAAATATCGTTTTATCATAAAGGGATTCATTATGAAGGAATT 99
BSNT_01672___ 100 TATCATAAGAGC-GGTGAGATTGAATGGGG-AG-ACTTGTTTCCCGCCCG 146
|||||||| |.| ||.||.||.||.||||| || ||.|.| |.||||
BL02831___yhe 100 TATCATAA-ATCGGGGGAAATCGAGTGGGGCAGCACCTAT----CCCCCG 144
BSNT_01672___ 147 C--GCTGACGAGCCTGCTCTTACAAACGAGATACATGAACTGATGCTTTT 194
| |.||||||||||.|.||.|.||.|||.||.||||||.|.|||||.||
BL02831___yhe 145 CATGATGACGAGCCTTCCCTGAAAAGCGAAATTCATGAATTAATGCTCTT 194
BSNT_01672___ 195 TCATATTTATGACTAG 210
.||||||||.||.||.
BL02831___yhe 195 CCATATTTACGAGTAA 210
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.