Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01610 and BL02859

See Amino acid alignment / Visit BSNT_01610 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:05
# Commandline: needle
#    -asequence dna-align/BSNT_01610___yhdB.1.5803.seq
#    -bsequence dna-align/BL02859___yhdB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01610___yhdB-BL02859___yhdB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01610___yhdB-BL02859___yhdB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01610___yhdB
# 2: BL02859___yhdB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 256
# Identity:     175/256 (68.4%)
# Similarity:   175/256 (68.4%)
# Gaps:          20/256 ( 7.8%)
# Score: 554.5
# 
#
#=======================================

BSNT_01610___      1 ATGGATTATGCCGATTACGATAAAGCGCTTTATTACACCCATCGTTCTCA     50
                     .||.||||.||.|||||.||.|||||..|.||.||.||.||.||.||.||
BL02859___yhd      1 TTGAATTACGCTGATTATGACAAAGCTTTGTACTATACGCACCGGTCGCA     50

BSNT_01610___     51 ATGGGATAATTTATTAATTTTAATGGTGCGTACAGAGGACGATTTGTTAT    100
                     .|||||.||..|..|.||..|.||||||||.|||||.||||||||.||||
BL02859___yhd     51 GTGGGACAACCTGCTGATCCTGATGGTGCGGACAGAAGACGATTTATTAT    100

BSNT_01610___    101 CAAAACGAATTGAGCATTTTCTGCATGCGTATCATTTTGAACAG-GATTA    149
                     ||||.||.||.||.||||||.||||.||.||..|||||||| || |||.|
BL02859___yhd    101 CAAAGCGGATCGAACATTTTTTGCACGCCTACAATTTTGAA-AGAGATGA    149

BSNT_01610___    150 CGCCGTTTTAGAAAAGATGCTGTATTCCCTTCTCCGTTATATTGATCATG    199
                     ||||.||.|.|||||.|.|||.|||...||.||.|..|||||||||||.|
BL02859___yhd    150 CGCCATTGTCGAAAAAAGGCTTTATGATCTGCTGCAGTATATTGATCACG    199

BSNT_01610___    200 CCACAGAGCT------GACTTATGAAGATCAAATAGCC---CTTCTC---    237
                     ||.||    |      |||  |||||.|..|||..|.|   |||.||   
BL02859___yhd    200 CCTCA----TTTTCCGGAC--ATGAACACGAAAACGGCGTGCTTGTCTTT    243

BSNT_01610___    238 ACATAA    243
                     ||.|||
BL02859___yhd    244 ACGTAA    249


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