Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01695 and BL02860

See Amino acid alignment / Visit BSNT_01695 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:11
# Commandline: needle
#    -asequence dna-align/BSNT_01695___yhaL.1.5803.seq
#    -bsequence dna-align/BL02860___yhaL.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01695___yhaL-BL02860___yhaL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01695___yhaL-BL02860___yhaL.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01695___yhaL
# 2: BL02860___yhaL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 243
# Identity:     165/243 (67.9%)
# Similarity:   165/243 (67.9%)
# Gaps:          39/243 (16.0%)
# Score: 592.5
# 
#
#=======================================

BSNT_01695___      1 GTGTTATTTTTTCCATGGTGGGTGTATCTTTGTATTGTAGGCATCATTTT     50
                     |||.|..|.|||||.|||||||||||.|||||.||.||.|||||.|||||
BL02860___yha      1 GTGCTGCTGTTTCCGTGGTGGGTGTACCTTTGCATCGTCGGCATTATTTT     50

BSNT_01695___     51 CAGCGCATATAAACTTGTGGCGGCAGCCAAAGAGGAAGAAAAAGTAGACC    100
                     ||||||.|||||.||..||.||.|.||.||.||.||.|||||..|.||||
BL02860___yha     51 CAGCGCCTATAAGCTGATGACGACGGCAAAGGAAGAGGAAAAGATTGACC    100

BSNT_01695___    101 AGGCTTTTATTGAAAAAGAAGGACAGATTTATATGGAGAGGATGGAAAAG    150
                     ||||||||||.|||||||||||.|..||||||||.||..|||||||||| 
BL02860___yha    101 AGGCTTTTATCGAAAAAGAAGGCCGCATTTATATCGAACGGATGGAAAA-    149

BSNT_01695___    151 GAGCGAGAACGC----CGCA------GTTCTC---------------AGC    175
                        .||.||.||    ||||      ||.|.|               |.|
BL02860___yha    150 ---AGAAAAAGCAAAGCGCATGAAGCGTACACTGGATGAAGATCAAGAAC    196

BSNT_01695___    176 AGCATGAAGAAGAAAATC-----AAAACCATTCCATCGCATAA    213
                     |||||||     ||||||     |.|.||||||||||||||||
BL02860___yha    197 AGCATGA-----AAAATCGGCTGACAGCCATTCCATCGCATAA    234


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