Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01682 and BL02869
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:09
# Commandline: needle
# -asequence dna-align/BSNT_01682___hemZ.1.5803.seq
# -bsequence dna-align/BL02869___hemZ.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01682___hemZ-BL02869___hemZ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01682___hemZ-BL02869___hemZ.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01682___hemZ
# 2: BL02869___hemZ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1555
# Identity: 1109/1555 (71.3%)
# Similarity: 1109/1555 (71.3%)
# Gaps: 95/1555 ( 6.1%)
# Score: 3889.0
#
#
#=======================================
BSNT_01682___ 1 TTGCAAATTAAAATAGAAGGCATACATGATGACCGCCTGCATCGGCCTCT 50
||||..|||.|.||||||||..|.||.||.||..|..|.||..|.||.||
BL02869___hem 1 TTGCGCATTTATATAGAAGGGCTCCAAGACGAAAGGTTCCAGAGACCGCT 50
BSNT_01682___ 51 GCAAAATATTGCAAATTTGTTTTATGAAGAGTGCGAGCTTGCGTATGGCG 100
..|..||||.||.||.||.||.|.|||.||..||||..|.||...|||||
BL02869___hem 51 TGAGCATATAGCGAACTTATTCTTTGAGGAAAGCGAAGTCGCTCTTGGCG 100
BSNT_01682___ 101 GAGAGGAGCCCGCAGATTTTGTCATTTCTTTAGCGTTGTCACAAACGG-- 148
.|||.|.|||.|||||..|||..|| ||||.| |||
BL02869___hem 101 AAGAAGCGCCGGCAGACCTTGCGAT--------CGTTCT------CGGCT 136
BSNT_01682___ 149 ATGAGCATGTGACGGTTTCGGGAGAA------GTGAAGGGAAC---TGGC 189
|||| ||| ||.|||| ||.||||...| ||..
BL02869___hem 137 ATGA-------ACG-----GGAAGAAAACGGCGTCAAGGCTTCCGGTGCG 174
BSNT_01682___ 190 ATAAAGGA----------ACAGCATA------CAAAATTCTTTTCTCCCG 223
|||||||| ||||||.| .||||...||..|.||..
BL02869___hem 175 ATAAAGGATACGGACATTACAGCAGAATATGCGAAAAACATTGACCCCAA 224
BSNT_01682___ 224 GCATGAATGAAAAAGAAGCTTTTAAGCAAGTGAAAAACACAATTTCTTAT 273
|| |||..|||||.|||||.||||||||.|||||.||.||..||||.||.
BL02869___hem 225 GC-TGACGGAAAAGGAAGCGTTTAAGCAGGTGAAGAATACCGTTTCCTAC 273
BSNT_01682___ 274 GTGTATCTCAATCTTCTTCAGGCGCATACGGGCATTACGCAGAAGTGGGG 323
||.|.|.|.|...|.|||||||.||||||.||.||.|..|||||.|||||
BL02869___hem 274 GTTTTTTTGAGCATGCTTCAGGAGCATACCGGGATCATTCAGAAATGGGG 323
BSNT_01682___ 324 AATCCTCACAGGAATCCGGCCCACAAAGCTGCTTCATAAAAAACTGCAAA 373
.||.|||||.||..||||.||.||||||||||||||.|||||.|||.|.|
BL02869___hem 324 GATTCTCACCGGTGTCCGTCCGACAAAGCTGCTTCACAAAAAGCTGGAGA 373
BSNT_01682___ 374 GCGGAATGTCCAAGGAGCAAGCGCATGCTGAGTTGAAAAAAGACTATTTA 423
||||.|||.|.|||||..|.||.|||||.|||.||||....||.||||||
BL02869___hem 374 GCGGCATGCCAAAGGAAGAGGCCCATGCCGAGCTGAAGCGGGATTATTTA 423
BSNT_01682___ 424 ATTCATGATGAAAAAATCATGCTAATGCAGGAAATTGTTGACCGTCAGCT 473
|||||.||.|||||.|||...||.|||||..|.|||.|||||||||||||
BL02869___hem 424 ATTCACGACGAAAAGATCGAACTGATGCAAAACATTATTGACCGTCAGCT 473
BSNT_01682___ 474 GGCGGCAGTTCCGGATTTGTA----CCGAGTAAAGGATGAAGTCAGCATT 519
|...||.||.||.|||||||| |.|.|..|| ||.|||||||||
BL02869___hem 474 GAAAGCTGTACCTGATTTGTATGAGCTGGGCCAA----GAGGTCAGCATT 519
BSNT_01682___ 520 TATATCGGCATTCCGTTCTGCCCGACAAAATGCGCGTATTGCACATTCCC 569
||.||||||||.|||||||||||.||.||.|||||.||.|||||.|||||
BL02869___hem 520 TACATCGGCATCCCGTTCTGCCCCACGAAGTGCGCCTACTGCACGTTCCC 569
BSNT_01682___ 570 TGCGTACGCTATCCAAGGACAGGCGGGCAGAGTCGGCTCATTCCTATGGG 619
.|||||.||.|||..||||||.||.||..|||||||||||||..|.||||
BL02869___hem 570 GGCGTATGCGATCAGAGGACAAGCCGGACGAGTCGGCTCATTTTTGTGGG 619
BSNT_01682___ 620 GACTGCATTACGAAATGCAGAAGATTGGTGAATGGCTGAAGGAGCATGAT 669
|.||.||.||.||||||||.||.||.|||||||||||.||||||.|.|||
BL02869___hem 620 GGCTTCACTATGAAATGCAAAAAATCGGTGAATGGCTCAAGGAGAACGAT 669
BSNT_01682___ 670 GTTAAGGTTACAACCATTTACTTTGGCGGCGGGACGCCGACAAGCATTAC 719
||.|...|.||.|||.|.||.||.||||||||.|||||||||||||||||
BL02869___hem 670 GTCAGCATCACGACCGTGTATTTCGGCGGCGGAACGCCGACAAGCATTAC 719
BSNT_01682___ 720 AGCGGAGGAGATGGATCTGCTGTATGAAGAAATGGTCCGCTCCTTCCCGG 769
.||.||.||.||||||.|..||||||||||||||..|||.||.||.||.|
BL02869___hem 720 CGCCGAAGAAATGGATTTATTGTATGAAGAAATGCACCGTTCATTTCCCG 769
BSNT_01682___ 770 ATGTGAAAAACATTCGTGAGATTACGGTGGAGGCCGGTCGTCCTGACACG 819
|||||||||||||.||.|||.|||||||.||||||||.||.||.||.|||
BL02869___hem 770 ATGTGAAAAACATCCGCGAGGTTACGGTTGAGGCCGGGCGGCCCGATACG 819
BSNT_01682___ 820 ATTACAGAAGAAAAACTCGCCGTTTTAAACAAATATGACATTGATCGGAT 869
||||||||||||||.|||||.||.|||||.||||...||||.||.||.||
BL02869___hem 820 ATTACAGAAGAAAAGCTCGCGGTCTTAAAAAAATGGAACATCGACCGCAT 869
BSNT_01682___ 870 CAGCATCAATCCGCAATCCTACGAAAACGAAACGCTAAAGGCGATCGGGC 919
||||||.||.|||||.||.||||||||.||||||||.||.||||||||.|
BL02869___hem 870 CAGCATTAACCCGCAGTCTTACGAAAATGAAACGCTGAAAGCGATCGGAC 919
BSNT_01682___ 920 GGCACCATACGGTTGAAGAGACCATTGAGAAATATCATCTGTCACGCCA- 968
|.||||||||.||.|||||.||.||.||.||.||.||||||||.||..|
BL02869___hem 920 GCCACCATACCGTGGAAGAAACGATCGAAAAGTACCATCTGTCGCGAAAT 969
BSNT_01682___ 969 GCACGGCATGAATAATATTAACATGGACTTGATTATTGGTTTGCCTGGGG 1018
|| |||.|||...||.||.||.|||||.|||||.||.||..|.||.||.|
BL02869___hem 970 GC-CGGTATGTCGAACATCAATATGGATTTGATCATCGGCCTTCCGGGCG 1018
BSNT_01682___ 1019 AAGGTGTGAAGGAGTTTAGGCACAGTCTTTCAGAAACAGAAAAACTGATG 1068
||||.||.||.||.||.||.|||..||||||.|||||.||||||.|.|||
BL02869___hem 1019 AAGGAGTAAAAGAATTCAGACACTCTCTTTCCGAAACCGAAAAATTAATG 1068
BSNT_01682___ 1069 CCGGAATCCCTTACCGTTCATACTCTTTCATTTAAACGGGCGTCAGAAAT 1118
||.|||||..|.|||||||||||.||.||||||||.||.|||||.|||||
BL02869___hem 1069 CCTGAATCATTGACCGTTCATACGCTGTCATTTAAGCGCGCGTCTGAAAT 1118
BSNT_01682___ 1119 GACGAGAAACAAGCATAAGTACAAAGTTGCCGGCAGGGAAGAGGTT-TCT 1167
|||||..||||.|||||||||.||.||.||.|.|.|.||.||..|| ||.
BL02869___hem 1119 GACGAAGAACAGGCATAAGTATAAGGTGGCTGACCGCGAGGAAATTGTCG 1168
BSNT_01682___ 1168 CAAATGATGGAAGACGCGGTAGCCTGGACGAAAGAGCATGGGTACGTGCC 1217
| .||||||||.|||||.||..|.|||||||||.||||.||.|||...||
BL02869___hem 1169 C-GATGATGGATGACGCTGTCTCGTGGACGAAACAGCACGGTTACCATCC 1217
BSNT_01682___ 1218 TTATTATTTATACCGCCAGAAAAACATTCTTGGAAACCTTGAAAACGTCG 1267
.||.|||||.|||.|.||||||||||||||.||.|||||.||.||..|.|
BL02869___hem 1218 CTACTATTTGTACAGGCAGAAAAACATTCTCGGCAACCTGGAGAATATAG 1267
BSNT_01682___ 1268 GATACTCTTTGCCGGGACAAGAAAGCATCTACAACATTATGATTATGGAA 1317
|.||.||..|.||.||.||.||.||||||||.|||||||||||.|||||.
BL02869___hem 1268 GCTATTCCCTTCCCGGCCAGGAGAGCATCTATAACATTATGATCATGGAG 1317
BSNT_01682___ 1318 GAGGTGCAGACGATTATTGGCATCGGCTGCGGCGCTGCTAGTAAATTTAT 1367
||....|||||||||||.||.|||||||||||.|||||.||.||||||.|
BL02869___hem 1318 GAAAAACAGACGATTATCGGGATCGGCTGCGGAGCTGCGAGCAAATTTGT 1367
BSNT_01682___ 1368 TGAT-CGGGATACAGGGAAAATCACGCATTTTGCGAATCCGAAAGATCCG 1416
.||| ||.||| |.||.|||||||||||.|||.|.|||||||||||.|||
BL02869___hem 1368 CGATCCGAGAT-CGGGAAAAATCACGCACTTTTCCAATCCGAAAGACCCG 1416
BSNT_01682___ 1417 AAATCGTACAATGAGCGCTTCGAGCACTACACGGACGAAAAAATCAAATA 1466
|||.|.||||||||..|.||.||.||.||.||..|||||||||||...||
BL02869___hem 1417 AAAACTTACAATGACAGATTTGAACATTATACAAACGAAAAAATCCGCTA 1466
BSNT_01682___ 1467 TTT---AGAGCAGATTTTTGAGAAG-----------ACGACAA-AGCAGC 1501
.|| .|||| |||||.||||| ||.|.|| ||
BL02869___hem 1467 CTTGTCTGAGC---TTTTTCAGAAGGATGGTTCTCAACAAGAATAG---- 1509
BSNT_01682___ 1502 ACTGA 1506
BL02869___hem 1509 ----- 1509
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