Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01657 and BL02875
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:08
# Commandline: needle
# -asequence dna-align/BSNT_01657___dat.1.5803.seq
# -bsequence dna-align/BL02875___dat.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01657___dat-BL02875___dat.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01657___dat-BL02875___dat.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01657___dat
# 2: BL02875___dat
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 926
# Identity: 557/926 (60.2%)
# Similarity: 557/926 (60.2%)
# Gaps: 151/926 (16.3%)
# Score: 1537.5
#
#
#=======================================
BSNT_01657___ 1 ATGAAGGTTTTAGTCAATGGCCGGCTGATTG---GGCGC-AGTGAAGCAT 46
|||||.|||.|..|.||.||||||||||||| ||.|| |||| |
BL02875___dat 1 ATGAAAGTTCTTTTTAACGGCCGGCTGATTGAACGGAGCGAGTG-----T 45
BSNT_01657___ 47 -CAATCGATTTGGAAGATCGCGGTTATCAGTTTGGTGACGGCATCTATGA 95
|..|.|||.|.||.||..|.||.||.||.|||||.||||||.|||||||
BL02875___dat 46 GCGGTTGATATTGAGGACAGAGGCTACCAATTTGGAGACGGCGTCTATGA 95
BSNT_01657___ 96 AGTGATCAGGGTGTACAAAGGAGTATTGTTCGGTTTACG-----TGAGCA 140
|||.|||.|..|.|||||.|||.|.|||||| ||| |||.||
BL02875___dat 96 AGTCATCCGCATTTACAATGGAATTTTGTTC-----ACGCTTGATGAACA 140
BSNT_01657___ 141 TGTAGAGCGTTTTTTCAGAAGTGCTGCTGAAATCGGAATTTCACTGCCAT 190
..|.|..||.||.|..|.|||.||.||.|||||||||||....|||.|.|
BL02875___dat 141 CATTGCCCGCTTATATAAAAGCGCAGCCGAAATCGGAATCGACCTGTCTT 190
BSNT_01657___ 191 TCAGTATAGAA---GATCTCGAGTGGGACCTGCAAAAGCTTGT--ACAGG 235
| |..|||| ||.||..|..|..|.|||.||.||||.|| |||..
BL02875___dat 191 T---TTCAGAAGCCGAGCTGAAAAGCCAGCTGAAAGAGCTCGTCGACATC 237
BSNT_01657___ 236 AAAATGCGGTCAG-TGAGGGA--GCGG--TATACATTCAGACAACAAGAG 280
|| |||| ||.|||| |||| |.||..||||....|||||.|
BL02875___dat 238 AA-------TCAGATGCGGGAAGGCGGGCTGTATCTTCAAGTGACAAGGG 280
BSNT_01657___ 281 GTGTGGCCCCGCGAAAACACCAGTATGAAGCCGGCCTCGAGCCGCAGACT 330
|....||.|||.|.||.||.||.||.|.|||.||.||...|||.|||...
BL02875___dat 281 GAAAAGCTCCGAGGAAGCATCAATACGGAGCAGGGCTTACGCCTCAGGTG 330
BSNT_01657___ 331 ACTGCCTATACGTTTACGGTGAAAAAACCGGAGCAAGAGCAGGCATACGG 380
||.||.|||||.|||.|..|..|.||.||.||..||||.|||..|.||||
BL02875___dat 331 ACGGCTTATACATTTCCTATTCAGAAGCCTGAAAAAGAACAGCAAAACGG 380
BSNT_01657___ 381 AGTGGCGGCCATTACAGATGAGGATCTTCGCTGGTTAAGATGTGATATCA 430
.||..||||.|||||.|..||.||..|.||||||.|.||.||.||.||.|
BL02875___dat 381 CGTTTCGGCTATTACTGCGGACGACATGCGCTGGCTGAGGTGCGACATTA 430
BSNT_01657___ 431 AAAGTCTGAATTTACTGTATAATGTCATGACGAAGCAAAAGGCCTATGAA 480
||||..|.|||.|..||||.||.|||||||..||||||||.||..|||||
BL02875___dat 431 AAAGCTTAAATCTGTTGTACAACGTCATGATCAAGCAAAAAGCGCATGAA 480
BSNT_01657___ 481 GCGGGAGCATTTGAAGCCATTTTACTTAGGGACGGCGTTGTTACGGAGGG 530
||.....||||.|||||.||.|||.||.|.|||||..|.||.|||||.||
BL02875___dat 481 GCTTCTTCATTCGAAGCGATCTTAATTCGCGACGGTTTGGTGACGGAAGG 530
BSNT_01657___ 531 TACATCCTCTAACGTTTATGCCGT------------TATCAACGGCACGG 568
.||.||.||.||.|||||||.||| ||||.||
BL02875___dat 531 GACGTCTTCAAATGTTTATGTCGTCAAACAAAACGCTATCTAC------- 573
BSNT_01657___ 569 TGCGAACACATCCGGC--TAACCGGCTCATTCTCAATGGAATTACACGGA 616
||.|||||.|| .||| ||||||..|.||.||.||.||.||||
BL02875___dat 574 -----ACCCATCCTGCGACAAC--GCTCATCTTAAACGGCATCACGCGGA 616
BSNT_01657___ 617 TGAA--TATTTTAGGACTGATTGAGAAGA-ATGGGATTAAACTGGATGAG 663
|||| |..||.|| ||| ||.||||| |..||.||.||.| ||
BL02875___dat 617 TGAAAGTTCTTCAG--CTG--TGTGAAGAGAACGGCTTGAATT--AT--- 657
BSNT_01657___ 664 ACTCCTGTCAGT-GAAGAAGAGTTGAAACAG---------------GCGG 697
|| |||.|||.|.|||.|.|| ||||
BL02875___dat 658 ----------GTAGAAAAAGCGGTGACAAAGGATGAATTGCTGAATGCGG 697
BSNT_01657___ 698 AAGAGATCTTTATTTCGTCAACGACGGCAGAAATTATTCCGGTTGTGACG 747
|.||..|.||.||..||||||||||.||.|||.|.|||||| ||.||
BL02875___dat 698 ATGAAGTATTCATCACGTCAACGACAGCCGAAGTCATTCCG---GTCAC- 743
BSNT_01657___ 748 CTCGATGG--------ACAATCGG-TCGGAAGCGGGAAACCCGGACCGGT 788
||||||.| |||||||| ||.|.|||| |||||||||.|
BL02875___dat 744 CTCGATTGACGGGCAAACAATCGGCTCCGGAGCG-----CCCGGACCGCT 788
BSNT_01657___ 789 GACCAAACAGCTTCAGGCTGCTTTTCAAGAAAGCATT-------CAACAG 831
.||.|||.|..|.|||.|.|||||.|||.|.|||||| .|||||
BL02875___dat 789 CACAAAAAATGTGCAGACCGCTTTGCAAAACAGCATTTTGTCGGAAACAG 838
BSNT_01657___ 832 GCTGCTAGCATTTCATAA-------- 849
.||.||
BL02875___dat 839 ------------CCAAAACGGTTTAA 852
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