Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01622 and BL02892
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:05
# Commandline: needle
# -asequence dna-align/BSNT_01622___lytE.1.5803.seq
# -bsequence dna-align/BL02892___lytE.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01622___lytE-BL02892___lytE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01622___lytE-BL02892___lytE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01622___lytE
# 2: BL02892___lytE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1027
# Identity: 635/1027 (61.8%)
# Similarity: 635/1027 (61.8%)
# Gaps: 215/1027 (20.9%)
# Score: 2084.0
#
#
#=======================================
BSNT_01622___ 1 ATGAAAAAGCAAATCATTACAGCTACGACAGCAGTTGTTTTAGGATCGAC 50
||||||||.|||.|.||.|||||..|..||||.|||||||||||||||||
BL02892___lyt 1 ATGAAAAAACAAGTAATAACAGCAGCATCAGCGGTTGTTTTAGGATCGAC 50
BSNT_01622___ 51 GTTATTTGCAGGAGCGGCATCTGCACAAAGCATTAAGGTGAAAAAAGGCG 100
.||.|||||.|||||.||.||.||.||||.|||.|.||||||||||||.|
BL02892___lyt 51 TTTGTTTGCGGGAGCCGCTTCCGCGCAAACCATAACGGTGAAAAAAGGAG 100
BSNT_01622___ 101 ACACGTTATGGGATCTTTC-AAGAAAATACGACACAACGATCAGTAAAAT 149
||||||||||||.|.|||| ||| ||.||.|.||||||..||||.||.||
BL02892___lyt 101 ACACGTTATGGGGTTTTTCGAAG-AAGTATGGCACAACTGTCAGCAAGAT 149
BSNT_01622___ 150 TAAATCA-GAGAACCACCTTCGTTCAGATATTATTTATGTGGGACAAACT 198
|||| || ||.|||.|.||....||.|||||.|||||..|.|||||.|..
BL02892___lyt 150 TAAA-CAGGAAAACAAGCTGAAATCCGATATCATTTACATAGGACAGAGG 198
BSNT_01622___ 199 TTATCGATTAACGGCAAATCTACAAGTTC--------AAAAAGCAGC--- 237
.|.|||||.||.|| ||.| ||||| .||||||..|
BL02892___lyt 199 CTGTCGATCAATGG--AAGC----AGTTCTTCGTCTGCAAAAGCGTCGAA 242
BSNT_01622___ 238 AGTTCTTCTTCCTCTTCTTCTACATACAAAGT----AAAGAGCGGGGACA 283
|||| ||.||..||||..|.||||| ||| ||.||||
BL02892___lyt 243 AGTT--------TCATCAGCTACGCATAAAGTGGTCAAA----GGAGACA 280
BSNT_01622___ 284 GCCTTTGGAAAATTTCAAAAAAATACGGCATGACAATCAATGAACTGAAG 333
||||||||||||||||....|.||||||||||||..|.||.||||||||.
BL02892___lyt 281 GCCTTTGGAAAATTTCGCGGACATACGGCATGACTGTTAACGAACTGAAA 330
BSNT_01622___ 334 AAGCTGAATGGCTTAAAATCAGATTTGCTTCGTGTTGGACAAGTCCTGAA 383
|..|||||.||.||||||.|||||||..|.||..||||||||||..|.||
BL02892___lyt 331 ACTCTGAACGGTTTAAAAACAGATTTAATCCGGATTGGACAAGTATTAAA 380
BSNT_01622___ 384 ACTGAAAGGTTC--AACTAGTTCAAGCAGCTCCAGCTCATCAAAAGTGTC 431
|.|.|||||..| ||...||..|||||| ||||||
BL02892___lyt 381 AGTCAAAGGGACGAAAAGCGTAAAAGCAG--------CATCAA------- 415
BSNT_01622___ 432 ATCGTCTTCAACTTCTACTTATAAAGTGAAGAGCGGAGAC-AGCCTTTCT 480
|||| | ||||||.|
BL02892___lyt 416 --------CAAC---------------------------CAAGCCTTCC- 429
BSNT_01622___ 481 AAAATTGCGAGCAAATACGGCACTACGGTTAGCAAATTAAAAAGCTTAAA 530
||| |.||.
BL02892___lyt 430 -------------------------------GCA-----------TCAAG 437
BSNT_01622___ 531 CGGCTTAAAATCAGATGTAATCTATGTCAACCAAGTATTGAAGGTGAAAG 580
||| |.|||.|||
BL02892___lyt 438 CGG----------------------GACAAGCAA---------------- 449
BSNT_01622___ 581 GAACAAGCACAAGCAGCTCAAAACCTGCTTCATCTTCATCGTCTTCAAGC 630
|||||||.| |.|.||.||.|| |||||||.|| ||
BL02892___lyt 450 -AACAAGCGC-ACCTGCGCAGAA--------ATCTTCAACG-CT------ 482
BSNT_01622___ 631 AGCAAAACGTCATCTACATCACTTAATGTGAGCAAGCTGGTTTCTGATGC 680
.||.|||||| ||.||.|||||||||||
BL02892___lyt 483 --GAATACGTCA---------------------AAACTTGTTTCTGATGC 509
BSNT_01622___ 681 AAAAG-CGTTAGTCGGAACGCCATACAAATGGGGCGGAACGACAACTTCC 729
||||| |.||| ||||||||||.||.||||||||||||||..|.||.||.
BL02892___lyt 510 AAAAGCCCTTA-TCGGAACGCCTTATAAATGGGGCGGAACATCTACATCA 558
BSNT_01622___ 730 GGCTTTGACTGCAGCGGATTCATTTGGTACGTACTGAATAAACAAACAAG 779
||.||||||||||||||.||..|.||||||.|.||.||.|||||.||||.
BL02892___lyt 559 GGATTTGACTGCAGCGGGTTTGTCTGGTACATCCTCAACAAACAGACAAA 608
BSNT_01622___ 780 TGTGGGCAGAACAAGCACTGCAGGATACTGGAGTTCTATGAAGAGCATTG 829
|||.|..|||||.|..||.|..||||||||||.|||.|||||||||.|..
BL02892___lyt 609 TGTAGCGAGAACGAATACAGTCGGATACTGGAATTCAATGAAGAGCGTAT 658
BSNT_01622___ 830 CCAGCCCGTCTGTTGGTGATTTCGTCTTCTTCACAACATATAAATCCGGC 879
|.||||||.|.||.||.||||||||.||||||||.||||||.|..|.||.
BL02892___lyt 659 CAAGCCCGGCAGTAGGCGATTTCGTATTCTTCACGACATATCAGCCGGGA 708
BSNT_01622___ 880 CCTTCTCACATGGGGATTTACATTGGAAACAA-CAGTTTCATTCATGCAG 928
|||||.||.||||||.|||||||.|||||||| || .|||.|||||||.|
BL02892___lyt 709 CCTTCGCATATGGGGGTTTACATCGGAAACAATCA-ATTCGTTCATGCCG 757
BSNT_01622___ 929 GATCTGACGGCGTACAAATCAGCAGCCTGAACAACAGCTACTGGAAGCCT 978
|.||||||||||||...||||||....|||..||||||||.||||||||.
BL02892___lyt 758 GTTCTGACGGCGTAACGATCAGCGATATGACAAACAGCTATTGGAAGCCC 807
BSNT_01622___ 979 CGTTACCTCGGTGCGAAAAGATTCTAA 1005
||.||.||.||.||.|||.|.||||||
BL02892___lyt 808 CGCTATCTTGGAGCAAAACGCTTCTAA 834
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