Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01601 and BL02902

See Amino acid alignment / Visit BSNT_01601 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:04
# Commandline: needle
#    -asequence dna-align/BSNT_01601___glpD.1.5803.seq
#    -bsequence dna-align/BL02902___glpD.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01601___glpD-BL02902___glpD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01601___glpD-BL02902___glpD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01601___glpD
# 2: BL02902___glpD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1710
# Identity:    1255/1710 (73.4%)
# Similarity:  1255/1710 (73.4%)
# Gaps:          84/1710 ( 4.9%)
# Score: 4369.0
# 
#
#=======================================

BSNT_01601___      1 ATGATGAAACATCAATTTTCAAGTCTTGAAAGAGATCG-CATGCTGACAG     49
                     |||  |||.||| .|||||||||.|.|.||.|.|| || ||| .|.||||
BL02902___glp      1 ATG--GAATCAT-TATTTTCAAGCCGTAAACGGGA-CGACAT-TTTACAG     45

BSNT_01601___     50 -ACATGACGAAAAAAACA----TATGACCTATTTATTATCGGAGGAGGAA     94
                      |.|||||    |||.||    ||||||.|.|||||||||||.|||||.|
BL02902___glp     46 AATATGAC----AAAGCAGAAGTATGACGTGTTTATTATCGGCGGAGGTA     91

BSNT_01601___     95 TTACAGGAGCCGGAACAGCTCTTGACGCGGCATCAAGGGGAATGAAGGTC    144
                     ||||.||.||.||.||.||..|.||.||.|||||..|.||||||||....
BL02902___glp     92 TTACTGGGGCAGGGACGGCATTGGATGCCGCATCGCGCGGAATGAAAACG    141

BSNT_01601___    145 GCACTAAGCGAAATGCAGGACTTTGCGGCGGGAACATCAAGCCGATCAAC    194
                     ||.||..|||||||||||||||||||.||.|||||.||||||||.||.||
BL02902___glp    142 GCGCTTTGCGAAATGCAGGACTTTGCAGCCGGAACGTCAAGCCGTTCCAC    191

BSNT_01601___    195 GAAGCTGGTACATGGC-GGCTTGCGCTATTTAAAACAATTTGAAGTGAAA    243
                     |||.||.|||||.||| ||||| |||||||||||.|||||||||||||||
BL02902___glp    192 GAAACTTGTACACGGCGGGCTT-CGCTATTTAAAGCAATTTGAAGTGAAA    240

BSNT_01601___    244 ATGGTCGCTGAGGTAGGAAAAGAGCGGGCGATTGTGTATGAAAACGGCCC    293
                     |||||.||.|||||.||.||||||||||||||.||.|||||||||||.||
BL02902___glp    241 ATGGTAGCCGAGGTCGGCAAAGAGCGGGCGATCGTCTATGAAAACGGGCC    290

BSNT_01601___    294 GCATGTCACTACACCGGAATGGATGCTGCTTCCATTTCATAAAGGCGGCA    343
                     |||.||.||.||.||.|||||||||||||||||..|.|||||.||.||.|
BL02902___glp    291 GCACGTTACAACGCCCGAATGGATGCTGCTTCCGATGCATAAGGGAGGGA    340

BSNT_01601___    344 CATTTGGTTCATTTACAACATCTATCGGGTTAAGGGTTTATGACTTCCTT    393
                     |.||.||...|||.|..||.||.|||||..|.|||||.||.|||||..|.
BL02902___glp    341 CTTTCGGCAAATTCAGCACTTCAATCGGACTGAGGGTGTACGACTTTTTG    390

BSNT_01601___    394 GCAGGTGTGAAAAAGTCAGAACGAAGAAGCATGCTTTCAGCAAAAGAAAC    443
                     |||||.||.|||||..|.||.||.||.||||||||..|.||..|||||||
BL02902___glp    391 GCAGGCGTCAAAAAAGCTGAGCGGAGGAGCATGCTGACTGCCGAAGAAAC    440

BSNT_01601___    444 GCTGCAAAAAGAGCCTTTGGTAAAAAAAGACGGCTTAGAA-GGCGGCGGG    492
                     |||.|||||||||||..|.||.|||||..|||||.| ||| ||||||||.
BL02902___glp    441 GCTTCAAAAAGAGCCGCTCGTGAAAAAGAACGGCCT-GAAGGGCGGCGGC    489

BSNT_01601___    493 TACTATGTGGAATACCGCACTGACGATGCGAGACTGACCATCGAAGTCAT    542
                     ||.|||||.||||||||.||.||.|||||.|||.||||.|||||||||||
BL02902___glp    490 TATTATGTCGAATACCGGACGGATGATGCCAGATTGACGATCGAAGTCAT    539

BSNT_01601___    543 GAAGGAAGCGGTGAAATTCGGGGCAGAGCCTGTGAATTACTCCAAAGTGA    592
                     |||.|||||.||.||||||||.||.|||.|.||.|||||..|.||||| |
BL02902___glp    540 GAAAGAAGCCGTTAAATTCGGAGCCGAGGCCGTCAATTATGCAAAAGT-A    588

BSNT_01601___    593 AG-GAGCTTCTTTACGAAAAAGGCAAAGCCGTCGGCGTATTAATTGAAGA    641
                     || ||..||.|.||.|||||.|||||.|.|..||||||..|.||||||||
BL02902___glp    589 AGCGATTTTATATATGAAAACGGCAAGGTCACCGGCGTGGTCATTGAAGA    638

BSNT_01601___    642 TGTGCTGACAAAGAAAGAATATAAAGTGTATGCGAAAAAAATTGTCAATG    691
                     .||..|.||.||.|||...||....||.||.|||||||||||||||||||
BL02902___glp    639 CGTCTTCACGAAAAAAACGTACCGCGTCTACGCGAAAAAAATTGTCAATG    688

BSNT_01601___    692 CTACAGGCCCTTGGGTCGATCAGCTCAGAGAAAAAGACCATTCGAAAAAC    741
                     |..|.||.||.||||||||.|..||..|.||||||||||||||.|||.|.
BL02902___glp    689 CCGCGGGGCCGTGGGTCGACCGTCTGCGGGAAAAAGACCATTCAAAAGAA    738

BSNT_01601___    742 GGAAAGCATTTGCAGCATACAAAAGGCATTCACCTTGTATTTGACCAGTC    791
                     ||.||.||..|.|||||||||||||||.|.||.|||||.|||||.||.||
BL02902___glp    739 GGCAAACACCTTCAGCATACAAAAGGCGTGCATCTTGTTTTTGATCAATC    788

BSNT_01601___    792 TGTCTTTCCGCTGAAACAGGCTGTATATTTCGATACACCTGATGGCCGGA    841
                     .||||||||..|.|||||.||.||.|||||.|||||.|||||.|||||.|
BL02902___glp    789 GGTCTTTCCTTTAAAACAAGCCGTTTATTTTGATACGCCTGACGGCCGCA    838

BSNT_01601___    842 TGGTATTTGCGATTCCTCGTGAAGGCAAAACATACGTGGGAACAACAGAC    891
                     ||||.||.||.|||||..|.||.||.||..||||.||.||.|||||||||
BL02902___glp    839 TGGTGTTCGCCATTCCGAGAGACGGAAAGGCATATGTCGGCACAACAGAC    888

BSNT_01601___    892 ACTGTTTACAAAGAGGCGCTGGAGCATCCGCGGATGACAACGGAGGATCG    941
                     ||.||.|||||.|||....||||.||.||.||.|||||.||.|..||..|
BL02902___glp    889 ACCGTCTACAACGAGAATTTGGAACACCCTCGAATGACGACAGCAGACAG    938

BSNT_01601___    942 TGATTATGTCATCAATTCAATCAATTATATGTTCCCGGAACT--GAATAT    989
                     .|||||||||||||||.|||||||.|||||||||||.|||||  ||  ||
BL02902___glp    939 GGATTATGTCATCAATGCAATCAACTATATGTTCCCTGAACTTGGA--AT    986

BSNT_01601___    990 CACTG-CGAATGACATCGAATCCAGCTGGGCAGGGCTGCGTCCGCTGATT   1038
                     ||..| |||| ||..|||||||.||||||||.||.||..|.|||||||||
BL02902___glp    987 CAAAGCCGAA-GATGTCGAATCAAGCTGGGCTGGCCTCAGACCGCTGATT   1035

BSNT_01601___   1039 CATGAAGAAGGCAAAGATCCTTCTGAAATTTCACGGAAAGACGAGATTTG   1088
                     |||||||||||.|||||.||.||.||.|||||.||.|||||.|||||.||
BL02902___glp   1036 CATGAAGAAGGAAAAGACCCGTCCGAGATTTCCCGAAAAGATGAGATCTG   1085

BSNT_01601___   1089 GACATCTGACTCAGGCTTGATCACCATTGCCGGCGGAAAACTGACTGGAT   1138
                     |||.|||||.||.||..|||||||.||.|||||||||||.|||||.||.|
BL02902___glp   1086 GACTTCTGAATCCGGACTGATCACGATCGCCGGCGGAAAGCTGACAGGCT   1135

BSNT_01601___   1139 ACAGAAAAATGGCGGAGCACATCGTTGATCTTGTACGTGACCGCTTAAAA   1188
                     |||||||||||||.|||||.|||||.||||||||..|.|||||.||||||
BL02902___glp   1136 ACAGAAAAATGGCTGAGCATATCGTCGATCTTGTCAGAGACCGATTAAAA   1185

BSNT_01601___   1189 GAAGAAGGCGCAAAG-GATTTTGGCCCGTGTAAAACGAAAAAC-ATGCCA   1236
                     |||||.|||| |.|| ||.||.||.||.||.|.||| |||||| |||||.
BL02902___glp   1186 GAAGAGGGCG-ACAGAGACTTCGGGCCTTGCAGAAC-AAAAACGATGCCG   1233

BSNT_01601___   1237 ATCTCAGGCGGGCACGTCGGAGGTTCGAAAAATCTCATGTCCTTCGTTAC   1286
                     ||.||||||||.||..||||.||.||.||||||||...|.|.||..||..
BL02902___glp   1234 ATTTCAGGCGGCCATATCGGCGGCTCCAAAAATCTGGAGGCTTTTATTCA   1283

BSNT_01601___   1287 CGCGAAAACAAAAGAAGGAATTGCAGCCGGTTTATCAGAAAAAGAC-GCA   1335
                     .||||||.||...|||||.||||..|||||..|.||.| ||.|||| ||.
BL02902___glp   1284 AGCGAAAGCAGCCGAAGGGATTGAGGCCGGACTGTCCG-AAGAGACGGCC   1332

BSNT_01601___   1336 AAACAGCT-GGCGATCA-GATACGGCTCTAACGTAGATCGCGTCTTTGAC   1383
                     |||||..| |.||  || |||||||.||.||||.|||.|||.|.|||||.
BL02902___glp   1333 AAACAAATCGCCG--CACGATACGGTTCGAACGCAGACCGCCTGTTTGAT   1380

BSNT_01601___   1384 CGGATAGAAGCGCTGAAAGATGAGGCCGCGAAACGCAACATTCCGGTTCA   1433
                     ||.||...|.|||||||||||||.||.||.||||||..|||.||.||.||
BL02902___glp   1381 CGTATTCCATCGCTGAAAGATGAAGCAGCAAAACGCCGCATCCCTGTCCA   1430

BSNT_01601___   1434 TATTCTTGCTGAGGCAGAATACAGTATAGAAGAAGAGATGACTGCAACCC   1483
                     |.|.||.||.||....||.|||.|.||.||.|||||.|||.|.||...||
BL02902___glp   1431 TGTACTAGCAGAAATGGATTACGGGATCGAGGAAGAAATGGCAGCCGTCC   1480

BSNT_01601___   1484 CTGCTGACTTCTTTGTCCGCAGAA-CGGGACGTTTATTTTTTGATATCAA   1532
                     |.||.||||||||.|||||||||| |||..|| .|.||.|||||.|||||
BL02902___glp   1481 CGGCAGACTTCTTCGTCCGCAGAACCGGTGCG-CTGTTCTTTGACATCAA   1529

BSNT_01601___   1533 TTGGGTAAGAACATATAAAGA-TGCCGTTATTGATTTTATGAACGAG---   1578
                     ||||||..|.||.||.||||| .||| |||..||.|..||||.||||   
BL02902___glp   1530 TTGGGTCCGCACTTACAAAGAGAGCC-TTACGGACTACATGAGCGAGAAG   1578

BSNT_01601___   1579 -CGATTCCAATGGGATGAGCAGGCAAAAAACAAACATACAGAAAACC---   1624
                      .||    |.||||||     |||.|||           .|||..||   
BL02902___glp   1579 CTGA----ACTGGGAT-----GGCGAAA-----------CGAAGGCCCGG   1608

BSNT_01601___   1625 ----TCAA-------CAAG--CTTTTACACGATGCGGTCGTACCGCTTG-   1660
                         ||||       .|||  ||..||||||||||.||.||.|||||.| 
BL02902___glp   1609 CATGTCAAGGCATTGGAAGGACTACTACACGATGCTGTTGTCCCGCTGGA   1658

BSNT_01601___   1661 -AGC-AATAA   1668
                      ||| |||.|
BL02902___glp   1659 AAGCAAATGA   1668


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