Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01706 and BL02907
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:11
# Commandline: needle
# -asequence dna-align/BSNT_01706.1.5803.seq
# -bsequence dna-align/BL02907___yhaH.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01706-BL02907___yhaH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01706-BL02907___yhaH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01706
# 2: BL02907___yhaH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 416
# Identity: 258/416 (62.0%)
# Similarity: 258/416 (62.0%)
# Gaps: 73/416 (17.5%)
# Score: 831.5
#
#
#=======================================
BSNT_01706 1 ATGCTGAATGAATCCTATTTTGAAGAAAAAGACGGGGTGATTGTAATGGC 50
|||.|
BL02907___yha 1 ---------------------------------------------ATGTC 5
BSNT_01706 51 GAGCGGACGTTCTCTATTAACAGGACT-ATTCGTAGGCGGCATCATCGGA 99
.|..||.||.|||.||..|.|.||||| ||| ||||||||..|.|||||.
BL02907___yha 6 AAAAGGCCGATCTTTAGCAGCTGGACTGATT-GTAGGCGGTGTTATCGGC 54
BSNT_01706 100 GG---AGCAGCGGTTCTT-CTTACTGCACCTTCCTCAGGAAAGCAGCTGC 145
|| .||||| .|| ||.||.||.||..|.||||||||..|..||.
BL02907___yha 55 GGTGTTGCAGC----ATTGCTGACCGCGCCGACTTCAGGAAAAAACTTGA 100
BSNT_01706 146 GTGAAAAAATGAAAACCAATT-------ATGATTCTTTTGAAGAAACAAT 188
|.|.|.|..|.|||.||||.| ||| .|||||.||..|
BL02907___yha 101 GAGGACAGCTTAAAGCCAACTGCGGTAAATG-------GGAAGACACCGT 143
BSNT_01706 189 C-AAACGCTTAAAGTCAGACGGGCTTGCATTAAAAGACCAGCTGATCAAA 237
| |||.|||.|||..| |||||..|.|||||||||||.||..|..|||||
BL02907___yha 144 CAAAAGGCTGAAAAAC-GACGGAATCGCATTAAAAGAGCAATTCGTCAAA 192
BSNT_01706 238 GCGGCAAAAGAAAGCACGGATGTTATTAAAGACGTGGGCGGCGAGCTCCA 287
.|.||.|.||||.||.||||..|.|||||||||||.|||.||||.||.||
BL02907___yha 193 ACCGCCATAGAAGGCGCGGAAATCATTAAAGACGTCGGCAGCGAACTGCA 242
BSNT_01706 288 AACGTCAATTAAAAAATGGCAGGAAGAGATCAAGCCTCACCAGCAGGATC 337
||||||.||..|..||||||..||.||.|||||.|||||.|||||||| |
BL02907___yha 243 AACGTCCATCCAGGAATGGCGCGAGGAAATCAAACCTCATCAGCAGGA-C 291
BSNT_01706 338 TGCAAAAA-GAAATTGCCGATATCGAAGAGAAAATCAGACAGCTGGAGAA 386
|..||||| |||||.||.||.||||||||.||.||.|.||||||||||||
BL02907___yha 292 TTAAAAAAGGAAATCGCTGAGATCGAAGAAAAGATAAAACAGCTGGAGAA 341
BSNT_01706 387 AACCTTACAAAACTAA 402
||||||||||||||||
BL02907___yha 342 AACCTTACAAAACTAA 357
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