Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03523 and BL02909
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:31
# Commandline: needle
# -asequence dna-align/BSNT_03523___yqjZ.1.5803.seq
# -bsequence dna-align/BL02909___yqjZ.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03523___yqjZ-BL02909___yqjZ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03523___yqjZ-BL02909___yqjZ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03523___yqjZ
# 2: BL02909___yqjZ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 395
# Identity: 229/395 (58.0%)
# Similarity: 229/395 (58.0%)
# Gaps: 79/395 (20.0%)
# Score: 636.0
#
#
#=======================================
BSNT_03523___ 1 ATGGATTTTTTATCAAAAACACCTGAGCCTCCTTACTATGCAGTCATTTT 50
|| |||| ||||||||.||.|||||.||.||.||.||.||.|||||
BL02909___yqj 1 AT-GATT-----TCAAAAACGCCGGAGCCGCCGTATTACGCGGTGATTTT 44
BSNT_03523___ 51 TTCTTCTGTCAAAAGCGAA----AATGACACAGGATATGGAGAAACAGCG 96
..|.||.||||.|| |||| .||.|| ||.||...|||.||.||.
BL02909___yqj 45 CACATCGGTCAGAA-CGAATGGGGATAAC---GGCTACAAAGAGACGGCT 90
BSNT_03523___ 97 GAGCGGATGGTATCGCTTGCGGCGGATCAGCCTGGATTTTTAGGCGTGGA 146
|||...|||.||..||||||.||.||.|||||.||.||||||||.|..||
BL02909___yqj 91 GAGAACATGCTAAAGCTTGCCGCAGAACAGCCCGGCTTTTTAGGAGCAGA 140
BSNT_03523___ 147 AAGCGTACGTGAAGCGGATGGAAGGGGCATCACAGTTTCCTATTGGGACA 196
|||||.|.|.||...|.|.||||.|||.||.||.||.|||||||||||.|
BL02909___yqj 141 AAGCGCAAGGGACATGAACGGAAAGGGAATAACGGTCTCCTATTGGGAAA 190
BSNT_03523___ 197 GTATGGACGCAATTAACCATTGGAAGCATCACACTGAACATCAAGCA-GC 245
|..|.||.||.|||.|..|.||||||..||||...||||| |..||| ||
BL02909___yqj 191 GCCTTGAAGCGATTGAAAAATGGAAGTTTCACGGCGAACA-CCGGCAGGC 239
BSNT_03523___ 246 AAAAGAAAAAGGAAAAAGCGTTTGGTACGAGTC---GTATGCAGTCCGCG 292
.||.||||||||...||..|..|||||| || .|.|||.||.||..
BL02909___yqj 240 GAAGGAAAAAGGCCGAACAGAATGGTAC---TCTGACTTTGCCGTACGGA 286
BSNT_03523___ 293 TCGCAAAAATCGAA------------------------------------ 306
|.||||||.|.|||
BL02909___yqj 287 TTGCAAAAGTTGAAGACGCCAGAATTTCGGAGCGTTCCGGCCGGCCCCCG 336
BSNT_03523___ 307 --AGA------CAGCGGCTGTTTCAGGAGAACACG-AATGATTGA 342
||| |||||| ||||.|.|.| |||||
BL02909___yqj 337 TCAGATGGCACCAGCGG--------GGAGGAAATGCAATGA---- 369
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