Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00966 and BL02918

See Amino acid alignment / Visit BSNT_00966 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:30
# Commandline: needle
#    -asequence dna-align/BSNT_00966___ydgD.1.5803.seq
#    -bsequence dna-align/BL02918.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00966___ydgD-BL02918.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00966___ydgD-BL02918.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00966___ydgD
# 2: BL02918
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 375
# Identity:     234/375 (62.4%)
# Similarity:   234/375 (62.4%)
# Gaps:          72/375 (19.2%)
# Score: 688.0
# 
#
#=======================================

BSNT_00966___      1 ---------------ATGAAAGTCA-GTTTGGCAGTTTTTATGCTTGCGG     34
                                    .|.|||| || |..||||.|..||||||||..|.|
BL02918            1 GTGGCATTTATTTTCTTAAAAG-CAGGGCTGGCGGCATTTATGCTGACCG     49

BSNT_00966___     35 GAGGCATCATAAAGGTAAGC--CGCGTTCCCTTTCAAGTTGAGCATTGGC     82
                     |||||.|.||.|||||  ||  |.||||||.||||||||.||.|||||||
BL02918           50 GAGGCGTAATCAAGGT--GCTGCACGTTCCTTTTCAAGTCGAACATTGGC     97

BSNT_00966___     83 GGCATTATCAATATCCATTATGGTTTCTGACTGTTACTGGCAT-TCTTGA    131
                     |.||||||.|||||||..|.||||||||..|||||||.|| || |||.||
BL02918           98 GCCATTATGAATATCCGCTGTGGTTTCTTTCTGTTACAGG-ATGTCTCGA    146

BSNT_00966___    132 AATAGCCGGGGCACTTGCTATGA-CAGCGGGAATTTGGAATCGGTATGCA    180
                     |||.|||||.||.||||..|||| |.|| ||||||||||||  ||     
BL02918          147 AATCGCCGGAGCGCTTGGCATGATCGGC-GGAATTTGGAAT--GT-----    188

BSNT_00966___    181 GCAATTGGAGCAGGTGTTCTGTT------TGTCGTTCTC-------ATGG    217
                     |||..||     |.|| ||.|||      |||..|||||       |||.
BL02918          189 GCATCTG-----GCTG-TCGGTTCGGGGCTGTTATTCTCCCTGCTTATGA    232

BSNT_00966___    218 CGGGAGCCATTCATGCGCATATGTTTCGAGCAAGACAATCGGTCATCATG    267
                     |.||||||||.|||||.||..||.|.||.||..|.||..|..|..|||.|
BL02918          233 CAGGAGCCATCCATGCCCACCTGGTCCGGGCGCGGCAGCCTTTTTTCACG    282

BSNT_00966___    268 GCGATACCAGCGATGATTTGTTTGATTGTTT-----CT-ATCATGATCAT    311
                     ||.||.||.||...|.|||||||||   |||     || |.|||||||||
BL02918          283 GCCATCCCTGCCGCGGTTTGTTTGA---TTTGCGCCCTAAGCATGATCAT    329

BSNT_00966___    312 CCTGGGGAGTTACACGTAA------    330
                     |  |..|||.|    |||.      
BL02918          330 C--GTCGAGCT----GTACTTCTGA    348


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